Meriones unguiculatus (Mongolian gerbil): 110560731
Help
Entry
110560731 CDS
T05884
Symbol
Rc3h1
Name
(RefSeq) roquin-1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mun03000
]
110560731 (Rc3h1)
04121 Ubiquitin system [BR:
mun04121
]
110560731 (Rc3h1)
Transcription factors [BR:
mun03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
110560731 (Rc3h1)
Ubiquitin system [BR:
mun04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110560731 (Rc3h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-CCCH_UNK
zf-C3HC4_2
FYVE
zf_CCCH_4
zf-CCCH_4
Vesi_VP2
PaaA_PaaC
Baculo_IE-1
zf-RING_4
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
110560731
NCBI-ProteinID:
XP_021512429
LinkDB
All DBs
Position
11:82155720..82229327
Genome browser
AA seq
1126 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQIPEQQPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSPILPDES
AVDLSSRKPPALPNGIVSAGSTVTQLIPRGTDPSFDSSLKPGKLDHLSSSAPGSPPDLLE
SAPKSISALPVNPHPVPSRGPTDLPPMPVTKPIQMVPRGSQLYPAQQADVYYQDPRGTAP
AFEPAPYQQGMYYTPTPCVSRFVRPPPSAPEPGPPYLDHYPPYLQDRVINSQYGTQPQQY
PPIYPPHYDGRRVYPAQSYTREEIFRESPIPIEIPSAAVPSYVPESRERYQQVEGYYPVA
PHPAQIRPSYPREPPYSRLPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPTLP
PAFHQEEFLDEELKIAGKYKANDYSQYSPWSCDTIGSYIGTKDAKPKDVVAAGSVEMMNV
ESKGMRDQRLDLQRRAVETSDDDLIPFGDRPTVSRFGAISRTSKTLYQGAGPMQAMAPQG
APTKSISISDYSPYGAHGGWGDSPYSPHANIPPQGHFIEREKLSMAEVASHGKPLLSAER
EQLRLELQQLNHQISQQTQLRGLEAVSNRLVVQREVNTLAGQPQPPPKWPGMISSEQLSL
ELHQVEREIGKRTRELSMENQCSVDMKSKLATSKQAENGQPEPQNKVPAEDLTLTFSDVP
NGSALTQENLNLLSDKTSSMNLSEDPEGGGDNSDSQRSGVTSSSAP
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacaatggacggatttcctttcctgcccaatttgcactcagact
ttcgacgaaacaattcgaaaacccatcagtttgggctgtggccatactgtttgcaaaatg
tgcctgaataaactccaccgtaaggcttgcccatttgaccagaccactatcaatacagac
attgagctccttcctgtgaactcagcattactgcagcttgtgggtgctcagatccctgag
caacagcccattactttgtgtagtggggttgaagatacaaagcattatgaggaagccaag
aaatgcgtagaagaattagcattgtacctgaagccacttagcagtgctagaggagtaggt
ctgaatagcactactcagagtgttctgagtcgtccaatgcagaggaagcttgtgactctg
gtccactgccagctagtggaagaagaaggcaggatacgtgctatgagggctgctcgatct
ttaggtgagcgcacagttacagagctcattctccagcaccagaatcctcagcaactctcc
tctaatctctgggcagcagtcagagctaggggatgccagttccttggaccagcaatgcag
gaagaagctctgaagctagtcttgctggccttggaagatggttctgcgttgtcacggaaa
gtgttggttctctttgtggtacaaagactagagccacgttttcctcaagcatcgaaaacc
agtattggacatgttgttcagctcctctacagagcctcctgcttcaaggtcaccaaacgt
gatgaagactcttctttgatgcagctgaaagaagaatttaggacttatgaagctctgcga
cgagaacatgactcccagatagtacaaatcgctatggaagcaggcttaaggattgcacca
gaccagtggtcctctttgctttatggagaccagtctcacaaatctcatatgcaatccatt
attgacaagttgcagacccctgcctcttttgcacagagtgttcaggagctaacaattgct
ctccagcggactggagacccagcaaacttgaaccgactaagaccccatttggagctacta
gcaaatattgaccctagtccagatgctcctcctccaacatgggaacagctagaaaatggc
ctggttgctgtacgtacagtagtacatgggctggttgattatatccagaaccacagcaaa
aaaggagcagatcaacaacagcctccacagcatagcaaatacaaaacatacatgtgtcga
gatatgaagcagaggggaggatgccctcgtggggccagctgtacatttgcacactcgcag
gaagaactggaaaaatttcgtaaaatgaacaaacgtctggttcccagaagacccctgagt
gcctctttgggtcaacttaatgaggtgggcctgccttcacctatacttcctgatgaaagt
gcagtggatttgtccagcaggaaacctcctgcactaccaaatggaattgtatcggcaggg
agcacagtgacacagctgattccacgagggacagaccccagctttgattctagtctgaaa
ccaggaaagctagaccacctgagcagcagtgctcctggatcccctcctgacctgctggaa
tctgcccctaagagtatttctgccttacctgtgaatccacatcctgtaccttcaagagga
ccaacagatctgcctcctatgccagtcaccaaaccaattcagatggtacctcgaggttct
cagttatatccagcacaacaagcagatgtttattatcaggatcctcgaggaactgcccca
gcatttgagccagcaccttatcagcagggtatgtactatactccaacaccatgtgtatcc
cgctttgtccggcctccaccatctgctcctgaacctggtcctccatacttggatcattat
ccaccctacctccaagatcgtgtcataaactctcagtatggcacacagccacaacagtac
ccacctatatacccacctcactatgatggccgccgtgtataccctgctcagtcttataca
agagaggagattttccgggaaagccctatacccattgagattccatctgcagcagtgcca
tcctatgttcccgagtccagagaacgataccagcaggtagagggttactatccagtggcc
cctcatccagctcagatcagaccttcataccccagggagcctccctatagtcggcttcct
cctccccaaccccatcctagtctggatgagctacatcgcagacggaaggaaataatggcc
cagttagaagaaagaaaggttatctctccacctccttttgcaccttcaccaacattgcct
cctgcattccatcaagaagaatttttggatgaagaactgaagatagctggaaaatacaaa
gcaaatgattatagccaatattctccttggtcatgtgataccatcggctcctacattgga
accaaagatgcaaaacccaaagatgttgtggcagcagggagtgtggaaatgatgaatgta
gaaagtaaaggaatgagagaccagcgattggatcttcagagaagagcagtggaaactagt
gatgatgacctcatcccatttggagaccgaccgacagtatctcggtttggtgccatctct
cgaacatccaaaacgctgtatcagggtgctggcccaatgcaggctatggcacctcaggga
gcacccacaaaatctattagtatttcagattatagtccatatggagctcatggtggctgg
ggagattctccatattcacctcatgcaaacatacctcctcagggacacttcattgagaga
gagaaattgtccatggcagaagtggccagtcatggaaaaccccttctgtctgctgaaaga
gaacaactacggctagaattgcagcaactgaatcatcagatcagccagcagacccagtta
cgtggactagaggctgttagtaaccggctagtggtacagagggaggtgaacaccctggcg
ggccagccacagccccctccaaaatggcctggaatgatctcaagtgagcagctaagcttg
gaactacatcaggtggaaagggaaattgggaagagaacccgggaattgagtatggagaac
cagtgttctgtcgacatgaaaagcaaattggctacaagtaaacaagcagaaaatggacag
ccagaaccacaaaacaaggtcccagctgaagaccttacattgacattcagtgatgtacca
aatggatcagctttgacacaagagaatctcaacctcctgtcagacaagaccagctctatg
aacctgtcagaagatcctgagggaggaggagataacagtgattcccagagatcaggagtt
acttccagttctgctccctag
DBGET
integrated database retrieval system
