Meriones unguiculatus (Mongolian gerbil): 110560839
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Entry
110560839 CDS
T05884
Symbol
Rc3h2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mun03000
]
110560839 (Rc3h2)
04121 Ubiquitin system [BR:
mun04121
]
110560839 (Rc3h2)
Transcription factors [BR:
mun03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
110560839 (Rc3h2)
Ubiquitin system [BR:
mun04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110560839 (Rc3h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-CCCH_UNK
zf-C3HC4_4
Xin
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
110560839
NCBI-ProteinID:
XP_021512620
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All DBs
Position
8:complement(78911153..78966681)
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AA seq
1188 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQSIKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKSHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKMSATVRTFPLLNKVGVNSTVTTTAGNVISVI
GSTETTGKIVPSTNGISNAESSVSQLIPRSADSGVRTLETVKKVGKVGTNGQNAAGSSAE
SVSENKIGSPPKTPVSNAAATSSGPSNFGTELNSVPPKSSPFLTRVPVYPQHSESIQYFQ
DPRTQIPFEVPQYPQTGYYPPPPTVPAGVTPCVPRFVRSSNVPESSLPPASMPYADHYST
FSPRDRMNSSPYQPPPPQQYGPVPPVPSGMYAPVYDSRRIWRPAMYQRDDIIRSNSLPPM
DVMHSSVYQTSLRERYNSLDGYYSVACQPPNEPRTTVPLPREPCGHLKTSCEEQLRRKPD
QWAQYHTQKAPVSSTLPVAAQSPTPPSPLFSVDFRTDFSESVSGTKFEEDHLSHYSPWSC
GTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRTKEEDPIIPFSDGPI
ISKWGAISRSSRTGYHTTDPVQATASQGSATKPISVSDYVPYVNAVDSRWSSYGSEATSS
AHYIERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLDEG
RHLTLNLLSKEIELRNGENDYTEDTVDTKPDRDIELELSALDTDEPDGQSEQIEEILDIQ
LGIGSQNDQLLNGTAVENGHAVQQHQKDSVKQKRQSLGEDHVILEEQKTILPVTSCFSQP
LPVSISSASCLPITTSVSVGNLILKTHVMSEDKNDFLKPIANGKMVNS
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagcgcaatggacagaatttctgtcctgtccaatctgctataatgaa
tttgatgagaatgtgcacaaacccatcagtttaggttgttcacacacagtttgcaagacc
tgcttaaataaacttcaccgaaaagcgtgtccttttgaccagactgccataaacacagac
attgatgtgctccctgtcaactttgcacttcttcagttagttggagcccaggtaccagat
catcaatcaataaagttaagtaatctaggtgagaataaacactatgaagtggcaaaaaaa
tgtgttgaagatttggcactctacttaaaaccactaagtggaggcaaaggcgtagctagc
ttgaaccagagtgccctgagccgtccaatgcaaaggaaactagttacacttgtaaactgt
caactggtggaggaagaaggtcgtgtcagagccatgagagcggcccgttcactaggagaa
agaactgtgacagaactgatactgcagcaccaaaaccctcagcagctgtctgccaacctg
tgggctgctgtcagggctcgaggatgccagtttctagggccagctatgcaagaagaagcc
ttgaagttggtattgctggcattagaagatggttctgccctctcaaggaaagttctggta
ctttttgttgtgcaaagactggaaccaagatttcctcaggcatcaaaaacaagtattggt
catgttgtacagctactgtaccgagcttcttgttttaaggttactaaaagggatgaagac
tcttccctgatgcagctaaaggaggaatttcggagttatgaggcactacgcagagaacat
gatgcccaaattgttcatattgccatggaagcaggacttcgtatttcacctgagcagtgg
tcttctctgctctatggggacttggctcataaatcacacatgcagtctatcattgataag
ctacagtctccagaatcatttgcaaagagtgtccaggaattgacaattgttttgcaacga
acaggtgatccagctaatttaaatagactgaggcctcatttagagcttcttgcaaacata
gaccctaacccagatgctgtttcaccaacttgggagcagctggaaaatgcaatggtagct
gttaaaacagtggttcatggtcttgtggacttcatacaaaattatagtagaaaaagccac
gagacaccccagcctcagccaaacagcaagtacaaaactagcatgtgccgagatttgcga
caacaagggggttgtccacgaggaacaaattgtacatttgcccattctcaggaagaactt
gaaaagtaccgattaaggaacaaaaagatgagtgcgactgtaagaacgtttcctcttctg
aataaagttggtgtaaacagcactgtcacaaccacagccggaaatgtcatttctgtcata
ggaagtactgaaacaactgggaaaattgttccaagcacaaatggaatttcaaatgcagaa
agcagtgtttcccagctaatcccacgaagtgctgacagtggagtaaggactctggagact
gtgaagaaagttgggaaggttggcactaatggccagaacgctgctgggtcctctgcagag
tctgtgtccgaaaataaaattggttctccacccaagactcctgtaagtaatgcagcagct
acctcttctgggccctctaattttggaacagagctgaattccgtgcctcccaaatcaagc
ccatttctaactagagttccagtatatcctcagcattctgaaagcattcagtattttcaa
gatccaaggactcagataccttttgaagtcccacaatacccacaaacaggatactaccca
ccacctccaacggtaccagctggtgtgactccctgtgttcctcgatttgtgaggtccagt
aatgttccagagtcctccctcccacctgcctccatgccatatgctgatcattacagtaca
ttttcccctcgagatcgaatgaattcttctccttaccaacctcctcctccgcagcagtat
ggaccagttcccccagtaccctctggaatgtatgctcctgtgtatgacagcaggcgtatc
tggcgcccagctatgtaccaacgagatgacattattagaagcaattctttacctccaatg
gatgttatgcactcgtctgtctatcagacatctttacgggaaagatataactcattagat
ggatattattcagtggcttgtcagccaccaaatgagccaaggacaactgtgcctttacca
agggaaccttgtggtcatttgaagactagttgtgaggaacagttaagaagaaagccagat
cagtgggcacagtaccatacccagaaagcacctgtctcttcaactcttcctgtggcagca
cagtcaccaacaccaccttctcctctgttcagtgtagacttccgaaccgatttctctgag
agtgtgagtggcacaaaatttgaggaagaccatctttcccattattctccctggtcttgt
ggcaccataggctcttgtattaatgccattgattcagagcccaaagacgtaattgctaat
tcaaatgctgtgctaatggacctggacagtggggatgtgaagagaagagtgcatttattt
gaaactcagagaaggacaaaagaagaagaccctattattccctttagtgatggacccatt
atctcaaagtggggtgcaatttcccgatcctctcgaacaggttaccatacaacagatcca
gtccaggccactgcttcccaaggaagtgcaactaagcccatcagtgtatcagattatgtc
ccttatgtcaatgctgtcgattcaaggtggagttcatatggcagtgaagccacatcatca
gcacactatattgaaagggacagattcattgttacagatttatctggtcatagaaagcat
tccagtactggagaccttttgagcattgagcttcagcaggccaagagtaactcattactt
cttcagagggaggctaatgctctggccatgcagcagaagtggaattccctggatgaaggc
cgtcaccttactttaaatcttctcagcaaggaaatcgaactgagaaatggagagaatgat
tatacagaagacacagtagatacgaagcctgatagagatattgagttagagctttcagca
cttgatactgatgaacctgatggacaaagtgaacaaattgaagaaatcctagacatacaa
cttggtatcggttctcaaaacgatcagttgctgaatggaacagcagtggaaaatggtcat
gcagtccagcagcaccaaaaggactcagtaaagcagaagagacagagtttaggtgaagac
catgtgattctggaggagcaaaaaacaattctaccggtaacatcttgctttagccagcca
ctcccagtgtctattagcagtgcaagctgcctccctatcaccacatctgtcagtgttggc
aacctcattctgaaaactcacgttatgtctgaagataaaaacgactttttaaaacctatt
gcaaatgggaagatggttaacagctga
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