Meriones unguiculatus (Mongolian gerbil): 110560919
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Entry
110560919 CDS
T05884
Symbol
Snrnp200
Name
(RefSeq) U5 small nuclear ribonucleoprotein 200 kDa helicase
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Pathway
mun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110560919 (Snrnp200)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mun03041
]
110560919 (Snrnp200)
Enzymes [BR:
mun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110560919 (Snrnp200)
Spliceosome [BR:
mun03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
110560919 (Snrnp200)
Complex C
U5 SnRNP specific factors
110560919 (Snrnp200)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
WHD_SNRNP200
DEAD
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
AAA_22
AAA_30
PhoH
SWI2_SNF2
DUF603
Motif
Other DBs
NCBI-GeneID:
110560919
NCBI-ProteinID:
XP_021512762
LinkDB
All DBs
Position
18:complement(14866617..14896274)
Genome browser
AA seq
2136 aa
AA seq
DB search
MADVTARSLQYEYKANSNLVLQADRSLIDRTRRDEPTGEVLSLVGKLEGTRMGDKAQRTK
PQMQEERRAKRRKRDEDRHDINKMKGYTLLSEGIDEMVGIIYKPKTKETRETYEVLLSFI
QAALGDQPRDILCGAADEVLAVLKNEKLRDKERRREIDLLLGQTDDTRYHVLVNLGKKIT
DYGGDKEIQNMDDNIDETYGVNVQFESDEEEGDEDVYGEVREEASDDDMEGDEAVVRCTL
SANLVASGELMSSKKKDLHPRDIDAFWLQRQLSRFYDDAIVSQKKADEVLEILKTASDDR
ECENQLVLLLGFNTFDFIKVLRQHRMMILYCTLLASAQSEAEKERIMGKMEADPELSKFL
YQLHETEKEDLIREERSRRERVRQSRMDTDLETMDLDQGGEALAPRQVLDLEDLVFTQGS
HFMANKRCQLPDGSFRRQRKGYEEVHVPALKPKPFGSEEQLLPVEKLPKYAQAGFEGFKT
LNRIQSKLYRAALETDENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIY
IAPMRSLVQEMVGSFGKRLATYGITVAELTGDHQLCKEEISATQIIVCTPEKWDIITRKG
GERTYTQLVRLIVLDEIHLLHDDRGPVLEALVARAIRNIEMTQEDVRLIGLSATLPNYED
VATFLRVDPAKGLFYFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQ
VLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLELKDLLPY
GFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGR
WTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQYYLSLLNQQLPIESQMVSKLPDM
LNAEIVLGNVQNAKDAVNWLGYAYLYIRMLRSPTLYGISHDDLKGDPLLDQRRLDLVHTA
ALMLDKNNLVKYDKKTGNFQVTELGRIASHYYITNDTVQTYNQLLKPTLSEIELFRVFSL
SSEFKNITVREEEKLELQKLLERVPIPVKESIEEPSAKINVLLQAFISQLKLEGFALMAD
MVYVTQSAGRLMRAIFEIVLNRGWAQLTDKTLNLCKMIDKRMWQSMCPLRQFRKLPEEVV
KKIEKKNFPFERLYDLNHNEIGELIRMPKMGKTIHKYVHLFPKLELSVHLQPITRSTLKV
ELTITPDFQWDEKVHGSSEAFWILVEDVDSEVILHHEYFLLKAKYAQDEHLITFFVPVFE
PLPPQYFIRVVSDRWLSCETQLPVSFRHLILPEKYPPPTELLDLQPLPVSALRNSAFESL
YQDKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGSGKTICAEFAILRMLLQNSEGRCVYIT
PMEALAEQVYMDWYEKFQDRLNKKVVLLTGETSTDLKLLGKGNIIISTPEKWDILSRRWK
QRKNVQNINLFVVDEVHLIGGENGPVLEVICSRMRYISSQIERPIRIAALSSSLSNAKDV
AHWLGCSATSTFNFHPNVRPVPLELHIQGFNISHTQTRLLSMAKPVYHAITKHSPKKPVI
VFVPSRKQTRLTAIDILTTCAADIQRQRFLHCTEKDLIPYLEKLSDSTLKETLLNGVGYL
HEGLSPMERRLVEQLFSSGAIQVVVASRSLCWGMNVAAHLVIIMDTQYYNGKIHAYVDYP
IYDVLQMVGHANRPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHLDHCMHDHFNAEI
VTKTIENKQDAVDYLTWTFLYRRMTQNPNYYNLQGISHRHLSDHLSELVEQTLSDLEQSK
CISIEDEMDVAPLNLGMIAAYYYINYTTIELFSMSLNAKTKVRGLIEIISNAAEYENIPI
RHHEDNLLRQLAQKVPHKLNNPKFNDPHVKTNLLLQAHLSRMQLSAELQSDTEEILSKAI
RLIQACVDVLSSNGWLSPALAAMELAQMVTQAMWSKDSYLKQLPHFTSEHIKRCTDKGVE
SVFDIMEMEDEERNALLQLTDSQIADVARFCNRYPNIELSYEVVDKDSIRSGGPVVVLVQ
LEREEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSLISIKRLTLQQKAKVKLDFVAPATG
GHNYTLYFMSDAYMGCDQEYKFSVDVKEAETDSDSD
NT seq
6411 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgtgactgcccgcagtctgcagtacgagtacaaggcgaactcaaatcttgtg
ctccaagctgaccgctctctcattgaccggacccgccgggatgaaccgaccggggaggtc
ctttctctggttggaaagttggagggaacccgaatgggagataaagctcaacggaccaaa
ccacagatgcaggaggaaagacgggccaagagaagaaagcgtgatgaggaccggcacgac
atcaacaagatgaaaggttatactctgttgtcagagggcattgatgaaatggtgggcatc
atctacaagcccaaaactaaggagactcgggagacctatgaggtgctgctcagcttcatc
caggctgctcttggagaccagccacgtgatatcctttgtggggcagctgatgaagttctg
gctgtcctgaagaacgaaaaacttcgtgataaggagagaaggagggagattgacttgctg
ctgggtcagacagatgataccagataccatgtgctggtgaacttgggcaagaagatcaca
gactatggtggagacaaggagatccagaatatggatgacaacattgatgagacctatggt
gtgaatgtgcagtttgagtctgacgaggaggaaggtgatgaagatgtgtatggggaagtc
cgagaagaagcttctgatgatgacatggaaggggacgaggctgtagtgcgctgtaccctc
tcggctaatcttgtagcctcaggcgaactgatgagctctaagaagaaggatttgcaccct
cgggacatcgatgccttctggctgcagcgacagctcagtcgtttctatgatgatgccatt
gtgtcacagaagaaggcggatgaggtgttggagattttgaagacagcaagtgatgaccga
gaatgtgagaaccagctggttctgctccttggtttcaacacttttgacttcattaaagta
ttgcggcagcacaggatgatgattttgtactgtaccttgttggccagtgctcaaagcgaa
gctgaaaaggaaaggatcatgggaaagatggaagctgatccagagctatcaaagttcctc
tatcagctccatgagactgagaaggaagacctgatcagagaagaacggtcccggagagaa
agagtccgtcagtcccgaatggacacagatctggaaacgatggatttggaccagggtgga
gaggctctggctccacggcaggttctggatttggaggaccttgtttttacccaagggagc
cacttcatggccaacaaacgctgccagcttcctgacgggtccttccgacgccagcgcaag
ggctatgaagaggtgcacgtgcctgctttgaagcccaagccctttggctcagaagaacaa
ctgctcccagtggagaagctgccaaagtatgcccaggcaggatttgagggcttcaaaaca
ttgaaccggatccagagtaaactctatcgtgctgccttggagacagatgagaatttgctg
ctctgtgctcctactggtgccgggaagaccaatgtggccctgatgtgtatgctccgagag
atagggaaacacatcaacatggatggcaccatcaatgtggatgacttcaagatcatctac
atcgctcctatgcggtccttggtgcaggagatggtgggcagttttggaaagcgcctggcc
acgtatggcatcactgttgctgagctgactggggatcaccagctgtgcaaggaggaaatc
agtgccacacagatcattgtctgcacccctgagaagtgggacatcatcacacggaagggc
ggggagcgcacctatacccagctggtgcggctcattgtcctggatgagatccatcttctg
catgatgacagaggtcctgtcttagaagctttggtggccagggccatccgaaacattgag
atgacccaagaggatgtccgactcattggtctcagtgctaccctccccaactatgaagat
gtggccacctttctgcgtgttgaccctgccaagggcctcttctactttgacaacagcttc
cgcccagtacctctggaacagacatacgtgggcatcacagagaaaaaagctatcaaacgt
ttccagatcatgaatgaaatagtctatgagaaaatcatggagcatgctggaaaaaatcag
gtgctggtgtttgtccactctcgcaaagaaactgggaagacagctagggcaatccgtgac
atgtgcctggagaaggacaccttgggtctgtttcttcgagagggttctgcctccactgaa
gtccttcgtacagaagcagaacagtgcaagaacttggagctgaaggatcttttgccctat
ggctttgctattcatcatgcaggcatgaccagagttgaccgaacacttgtagaagatctt
tttgctgacaaacatattcaggttttagtttccacagcaactctggcttggggtgtaaat
ctccccgcacatacagtcatcatcaaaggcacccaagtgtacagcccagagaaggggcgc
tggacagagctgggagcactggatattctgcagatgctgggccgtgctggacgaccccag
tatgacaccaagggtgaaggtatactcatcacatctcatggggaacttcagtactacctc
tccctcctcaaccagcaacttcctattgagagccagatggtatcaaagctgcctgacatg
ctcaatgcggaaattgtgctggggaatgtccagaatgcaaaggatgccgtgaactggctc
ggctatgcctacctgtacatccgaatgctccgatcccctaccctctatggcatctctcat
gatgacctcaagggagatcccttgctggaccagcgccgactagatcttgttcacactgct
gccttgatgctggacaagaacaatctggtcaagtacgacaagaagacaggcaatttccag
gtgacagaacttggccggatagccagtcactactatatcaccaatgatactgtgcaaacc
tacaaccagctgctgaagcccactctgagtgagattgagcttttccgagtgttctccttg
tcctcagagttcaagaacatcactgtaagagaggaggagaaactggagctgcagaagttg
ctggagagggtgcccattcctgtaaaggaaagcatcgaggaacccagtgccaagatcaat
gtgcttcttcaagccttcatctcacagctgaaactggagggctttgcactgatggctgac
atggtgtacgtgacccagtccgctggccggttgatgcgtgcaatctttgaaattgtcctg
aaccgaggttgggctcagcttacagataagaccctgaatctctgcaagatgatcgacaaa
cgcatgtggcagtccatgtgtcctcttcgccagttccgtaaacttcctgaggaggtagtg
aagaagattgagaagaaaaacttcccctttgagcggctgtatgacttgaaccataatgag
ataggtgagcttattcgaatgccgaagatggggaagaccatccacaagtatgtccatctt
ttccctaagttggagttgtcagtgcacctgcagcctattacgcgctctaccctgaaagtg
gagctgaccatcacaccagatttccagtgggatgaaaaggtccatggttcatcagaggca
ttttggattctggtagaggatgtggacagcgaggtgattctgcaccatgaatattttcta
ctgaaagccaagtatgcccaggatgagcacctcatcacattctttgttccagtcttcgaa
ccattgccccctcagtacttcatccgagtggtgtctgaccgctggctctcttgtgaaacc
cagctgcctgtctccttccggcacctgatcctaccagagaagtacccacctccaactgaa
ttgttggacctgcagccattgcctgtatctgctctaagaaacagtgcttttgagagcctt
taccaagataaatttcctttcttcaatcccatccagactcaagtgtttaatactgtgtac
aacagcgatgataatgtgtttgtgggggcccccacgggcagtgggaagaccatctgtgca
gagtttgctatcctgcggatgctactgcagaattctgaggggcgctgtgtctatattacc
cccatggaggctctggcagagcaggtgtacatggactggtatgagaaatttcaggacagg
ctcaacaagaaggtggtgctgctgacgggggagaccagcacagacctgaagcttctgggc
aaaggcaacatcatcatcagtacccctgagaagtgggacatcctctccaggaggtggaag
cagcgcaagaacgtccagaacattaacctcttcgtggtggatgaggtccacctcattggg
ggcgagaatgggcctgtcttggaagtgatctgctcccggatgcgctacatctcctcgcag
attgagcggcccattcgaattgctgcactgagctcctcactctccaatgccaaggacgtg
gctcactggctgggctgcagtgccacctccaccttcaacttccaccctaatgtgcgtcct
gtacctttggagctgcatatccagggcttcaacatcagtcacacacagactcgcctgctg
tctatggccaagcctgtgtaccatgctatcaccaagcactcacctaagaagcccgtcatt
gtttttgtcccatctcgcaagcagacccgccttactgcaatagacatcctcactacctgt
gcagcagacatccagcggcagaggttcttgcactgtactgagaaggatctgatcccttac
ctggagaagctgagtgacagcacactgaaggaaacactattaaatggggtgggctacctg
catgaagggctgagtcccatggagaggcgcctagtagagcaactcttcagctcaggggct
atccaggtggttgtggcttctcgaagtctctgctggggcatgaatgttgctgcgcatcta
gtgatcatcatggatactcagtactacaatggcaagatccatgcctatgtagattacccc
atctacgatgtgcttcagatggtgggccatgccaaccgccccctgcaggatgatgagggg
cgctgcgtcatcatgtgtcagggctccaaaaaggattttttcaaaaaatttttatatgag
ccattgccagtagagtctcacctggaccactgtatgcatgaccacttcaatgctgagatt
gttaccaagaccattgagaacaagcaggatgctgtggactacctcacctggacctttctg
tatcgccgaatgacacagaaccccaattactacaacctgcagggcatatcccatcgtcat
ctgtctgaccatctgtcagagctggtggagcagaccctcagtgacctggagcagtccaag
tgcatcagcatcgaggatgagatggatgtggcgcctctgaatctgggcatgattgctgcc
tactattacataaactacaccaccattgagctcttcagcatgtctctaaacgccaaaacc
aaggttcgaggacttattgagattatttccaatgcggcggagtatgagaacattccaatc
agacatcatgaagacaacctgctgcgccagttggctcagaaggtcccccacaagctgaat
aaccccaagttcaatgacccacatgtgaagaccaacttgctgctgcaggctcacctgtcc
cgcatgcagctgagtgctgaactgcagtcagacacagaggagatcctcagtaaggcaatc
cggctcattcaggcctgtgtagatgtactctctagcaatgggtggctcagcccagctctg
gcagccatggaactggctcagatggtcacccaagccatgtggtctaaggactcttacctg
aagcagctgccacacttcacctcagagcatatcaaacgttgcacagataagggagtggag
agtgtttttgacatcatggaaatggaggatgaagagcggaatgcactgcttcagttgact
gacagccagattgcggatgtggcccgcttctgtaaccgctatccaaatatcgaactgtcc
tatgaagtggtggataaagacagcatccgcagtggtgggccagttgtggttctggtgcaa
ctggagagagaggaggaagtcacgggccctgtcattgcacctctcttcccacagaaacgt
gaagagggctggtgggttgtgattggagacgccaagtctaacagcctcatctccatcaag
aggctgaccctgcagcagaaagccaaggtgaagcttgactttgtggccccagccacaggt
ggccacaactacaccctgtacttcatgagtgacgcttacatgggatgtgaccaggagtat
aaattcagtgtggatgtgaaggaagctgagacagacagtgattcagattga
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integrated database retrieval system
