Meriones unguiculatus (Mongolian gerbil): 110564150
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Entry
110564150 CDS
T05884
Symbol
Polr1a
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Pathway
mun03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110564150 (Polr1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mun03021
]
110564150 (Polr1a)
Enzymes [BR:
mun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110564150 (Polr1a)
Transcription machinery [BR:
mun03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
110564150 (Polr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
110564150
NCBI-ProteinID:
XP_060239524
LinkDB
All DBs
Position
5:complement(13742816..13807016)
Genome browser
AA seq
1717 aa
AA seq
DB search
MLTSKHMPWRRIQGISFGMYSAEELKKLSVKSITNPRYVDSLGNPSANGLYDLALGPADS
KEVCSTCVQDFNSCSGHLGHIDLPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRASIHLL
LCQLRVLEVGALQAVYELEQILSRFLEETSDPSAVEIQEELEEYTSKILQNNLLGSQGAH
VKNVCESRSKLIAYFWKTHMTAKRCPHCKTGRSVVRKEHNSKLTITYPAVVHKKSAQKDA
EPPEQAPAAPGIDEAQMGKRGYLTPHSAQEHLLAIWKNEGFFLNCLFSGLDDPGMESGFN
PSMFFLDFIVVPPSRYRPINRLGDQMFTNGQTVNLQAVMKDAVLIRKLLALMAQEQKLPC
EMTELTIDKESDSSVAIDRSFLSMLPGQSLTDKLYNIWIHLQSHVNIVFDSEMDKLMLEK
YPGIRQILEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVT
PWNVQELRQAVINGPNVHPGASMVINEDGSRTALSAVDVTQREAVAKQLLTPATGAPKSQ
GTKIVCRHVKNGDILLLNRQPTLHRPSIQAHRAHILPEEKVLRLHYANCKAYNADFDGDE
MNAHLPQSELGRAEAYILACTDQQYLVPKDGQPLAGLIQDHMVSGANMTIRGCFFTREQY
MELVYRGLTDKMGRVKLFPPAILKPFPLWTGKQVVSTLLINIIPEDYAPLNLSGKAKIGS
KAWVKETPRPIPDFDPNSMCESQVVIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGET
SGRVLTCLARLFTAYLQLYRGFTLGVEDILVKPNADLKRQRIIEESTQCGPQAVRAALNL
PEASSSDEIQGKWQDAHLGKDQRDFNMIDMKFKEEVNHYSNEINKACMPFGLHRQFPENN
LQMMVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEVTPRAGGFVTG
RFLTGIRPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGS
VVQFLYGEDGLDIPKTQFLQPKQFPFLASNYEVIMKSKHLHEVLSRADPQKVLRHFKAIK
KWHSKHPNALLRTGAFLSFSQKIQAAVKALNLKGENQNGRSPETQQMLQMWYELDERSRW
KYQKRAAPCPDPSLSVWRPDIYFASVSETFEKKIDDYSQEWATQAEKSYKQSELSLDRLR
NLLQLKWQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILM
VASANIKTPMMSVPVFNTKKALKRVKSLKKQLTRVCLGEVLQKVDVQESFCMGEKQNKFR
VYELRFQFLPHVYYQQEKCLRPEDILHFMETRFFKLLMEAIKKKNSKASAFRTVNTRRAT
QKDLDDTEDSGRKRREEEGDEEEEGNIVDAEADEGDADASDTKRKEKQEEEVDYESEEEG
EEEEEEEGVQEEGDISGEGAPQAHEPDGEEGLGLEEEPSQKPAHRHSRLQGPEAVDRRIQ
AVREAHSFIEDYQYDTEKSLWCQVTLKLPLMKINFDMSSLVVALAHNAIVYTTKGITRCL
LNETTNSKNEKELVLNTEGINLPELFKYSEVLDLRRLYSNDIHAMANTYGIEAALRVIEK
EIKNVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIQSSSSPLQQMTFETSFQFLKQ
ATMMGSHDELKSPSACLVVGKVVKGGTGLFELKQPLR
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atgctgacctccaagcacatgccatggaggcggattcagggaatttccttcgggatgtat
tcggccgaggagctcaagaagttaagtgttaaatccattacgaaccctcgctatgtggac
agcctgggaaacccttcagccaatggcctatatgatttggcgttgggccctgctgactcc
aaagaagtgtgctccacctgcgtgcaggacttcaacagctgttccgggcacctgggccac
attgatctcccgctcactgtgtataaccctctcctctttgataaactctacctgctgctc
cgaggctcctgtttaaactgccacatgctgacttgtcctcgggcttcaattcacctgttg
ctctgccagctgagggtcttggaagtcggagccctacaagcggtctatgagcttgagcaa
attctgagcaggtttctagaagaaacttcagatccttctgccgtcgagattcaagaagag
ttagaggaatacacaagcaaaattcttcagaacaacctcttggggtcccagggtgctcat
gtgaaaaacgtgtgcgaaagcagaagcaagctcattgcttacttctggaagacacatatg
actgctaagcgatgtccgcactgcaaaaccggacgctcggtggttcggaaagagcacaac
agcaagctgaccatcacgtatccagccgtggtgcacaaaaaatctgcccagaaggatgca
gagccaccagaacaagcaccagcagctccagggattgacgaggctcagatggggaaacgg
gggtacctgaccccacacagcgcgcaagaacatcttttggccatttggaagaatgaaggc
ttcttcctgaattgccttttttcgggattggatgatcctggcatggagtccggtttcaac
cccagcatgttctttctagatttcatagtggtgccgccctccaggtatcgtccaatcaat
cgcctgggcgaccagatgtttactaatggccagacggtgaacttgcaagctgtcatgaag
gatgcagttttgatccggaaacttctggcattgatggcccaagaacagaagctgccctgt
gagatgacagaactcaccatagacaaggaaagtgactcttcagttgctatcgaccgatcc
tttttaagtatgcttccaggccagtctctcacagacaaactttacaacatttggattcac
cttcagagccacgtcaatattgtgtttgacagtgagatggacaagctgatgttggaaaag
taccctggcataagacagatcctagagaagaaggaaggcctgttccggaagcacatgatg
ggaaagcgagttgactacgcagcccgttcagtcatctgcccagacatgtacatcaacacc
aatgagattggaattcccatggtatttgccacaaaactgacctaccctcagccagttacc
ccctggaatgtgcaggaactgagacaggcagtcatcaatgggcccaacgtgcacccagga
gcctccatggtcatcaatgaggatggcagtcgcacagccctgagcgcagtagacgtcaca
cagcgggaagctgtggccaaacagctcctgacgccggccacaggagcacctaagtcccag
gggacaaaaattgtgtgccggcatgtgaagaatggggacatcctcctactgaaccgacag
cccaccttacacagaccctccatccaggcccaccgtgcccacattctgccggaagaaaag
gtccttcgccttcactatgccaactgcaaggcctacaatgctgactttgacggagacgag
atgaacgcccacttgccccagagtgagttgggccgagctgaagcctatatcctggcttgc
actgatcagcagtatctcgttcccaaggatggccagccgttggcagggctgattcaagat
cacatggtttcaggtgcaaacatgaccatccggggatgttttttcacccgggaacagtac
atggagctggtgtaccgaggactcacagacaagatgggacgtgtgaaactctttcctcct
gccatcctgaagcccttcccactgtggacaggaaagcaggttgtgtcaaccctcctcata
aacataatcccagaggactacgcccccctgaatttatctggaaaagcaaaaattggcagt
aaagcctgggtgaaggaaacaccacggcctattcctgactttgaccctaactccatgtgt
gagtcccaggtggtcatcagggaaggggagctgctgtgcggagtgctggacaaggcgcac
tacgggagctctgcctatggcctggtccactgctgctatgagatctatgggggcgagacc
agcggcagggtcctcacctgcctagcccgcctcttcactgcctacctgcagctctaccga
ggcttcaccttgggtgtggaagacattttggttaagccaaatgcagatttgaagagacag
cgcatcattgaagaatccacccagtgtgggccccaggctgtcagggctgcactgaacctg
ccagaagcttcatcaagtgatgagattcaagggaaatggcaggatgcccatctgggcaaa
gaccagagagattttaacatgattgatatgaagttcaaggaggaagtgaaccattacagc
aatgagataaacaaggcatgtatgccttttggcttgcacagacagttccccgagaacaac
ctgcagatgatggtgcagtcgggagccaaagggtcaactgtgaacaccatgcaaatctct
tgcctgctgggccagattgagttggaaggtcggagacccccactgatggcatctggcaag
tcactgccctgctttgagccttacgaggttacccccagggctggcggcttcgtcactgga
aggttccttaccggtatcaggcctcctgagttcttcttccactgcatggcagggcgagaa
ggccttgtggacactgctgtcaaaaccagccgttccggttatctccaaaggtgcatcatc
aagcacttggaggggctggtcgtccagtacgatctgacagttcgtgatagcgatggcagc
gtggtacagttcctgtatggggaggacggcctggacattcccaagacacagttcctgcag
cccaagcaatttcccttcctggccagcaactatgaggtgataatgaaatctaagcatctt
catgaagttttatccagagcagatccccagaaagtgctccgccacttcaaagccattaaa
aaatggcatagcaagcatcccaatgccctgctgagaacaggcgccttcctgagtttttcc
cagaagattcaggcagctgtgaaagccttgaacctaaagggcgagaaccagaatggccgc
agcccagagacccagcagatgttacagatgtggtatgaactagatgagcggagccgatgg
aaataccagaagagggccgccccctgtcccgaccctagcctttctgtgtggcgtccagac
atctactttgcgtctgtgtctgaaacgtttgaaaaaaagattgatgactacagtcaggag
tgggcaactcaagcggagaagagttacaagcagtcggagctttccctggacaggctgagg
aacttactgcagttgaagtggcagcgctcgctgtgtgaccccggcgaggctgttggcctt
ctggccgcccagagcatcggggagccgtccacacagatgacactgaacaccttccacttc
gcaggcagaggcgagatgaatgtcaccctgggcattccgaggctgagggagattctcatg
gtggccagtgccaacatcaagacgcctatgatgagcgtgcctgtgttcaacaccaagaaa
gcactgaagagagtgaagagtctgaagaagcagctcaccagggtgtgcctgggggaggtg
ttgcaaaaagttgacgttcaggagtccttctgtatgggagaaaaacagaataaattccgg
gtgtatgagctccggtttcagttcctaccacatgtatattaccagcaggagaagtgcctg
agacctgaggacatcctgcacttcatggaaaccagattctttaaactactaatggaagcc
atcaaaaagaagaatagcaaagcatcagccttcagaactgtgaacacgagaagagctact
cagaaggaccttgatgacaccgaggactcggggaggaagcggagagaggaggaaggggat
gaggaagaggaggggaacattgtggatgctgaagctgacgagggggatgcagatgcttct
gacaccaaacgcaaggagaagcaagaggaagaggttgactatgagagtgaggaagaaggg
gaggaggaagaggaagaagagggtgtacaagaggaaggggacatcagtggcgaaggtgcc
ccccaggcccatgagccagatggggaagaaggtttaggccttgaggaggaaccatcccag
aaacctgcccaccgccactcccggcttcagggacctgaggccgtagaccgccggatccag
gctgtacgggaggcccactcgttcattgaggactaccagtatgacaccgagaagagcctc
tggtgccaggtgactttgaagctcccactgatgaagattaattttgacatgagctccttg
gttgtggccttggcccacaatgccattgtctatacaaccaagggcatcactcggtgcctc
ctgaacgaaacgaccaacagtaaaaatgagaaggagcttgtgctgaacacagagggaatc
aacctccctgagctgttcaagtactctgaggtgctggacctgcgccgcctctactccaac
gacatccacgccatggccaacacctacggcatcgaggctgcactgcgggtgatagagaag
gagatcaagaatgtgttcgccgtgtatggcatcgcagttgatcctcgccacctctccctg
gttgctgattatatgtgttttgagggtgtttataaaccactcaatcgctttggaatccag
tcaagctcctcccctttgcagcagatgacatttgaaaccagtttccagtttctcaaacag
gccaccatgatgggttcccatgatgaactgaagtcaccttcagcctgtctcgtggtggga
aaagtcgtcaaaggcgggacaggcctgtttgaactcaagcagcccctcagatag
DBGET
integrated database retrieval system
