Meriones unguiculatus (Mongolian gerbil): 110564429
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Entry
110564429 CDS
T05884
Symbol
Smarcc1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Pathway
mun03082
ATP-dependent chromatin remodeling
mun04714
Thermogenesis
mun05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110564429 (Smarcc1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
110564429 (Smarcc1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
110564429 (Smarcc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mun03021
]
110564429 (Smarcc1)
03036 Chromosome and associated proteins [BR:
mun03036
]
110564429 (Smarcc1)
Transcription machinery [BR:
mun03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110564429 (Smarcc1)
Chromosome and associated proteins [BR:
mun03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110564429 (Smarcc1)
PBAF complex
110564429 (Smarcc1)
GBAF(ncBAF) complex
110564429 (Smarcc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
BRCT_2
DUF919
SpeFL
Motif
Other DBs
NCBI-GeneID:
110564429
NCBI-ProteinID:
XP_060241208
LinkDB
All DBs
Position
6:complement(41688214..41795566)
Genome browser
AA seq
1103 aa
AA seq
DB search
MAATAGGGSGAAAGAVGAGGAAAASGLAVYRRKDGGPASKFWESPDTVSQLDSVRVWLGK
HYKKYVHADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCHI
LGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLTRPNIYLIPDIDLKLA
NKLKDIIKRHQGTFTDEKSKASHHIYPYPSSQEDEEWLRPVMRRDKQVLVHWGFYPDSYD
TWVHSNDVDAEIEDPPIPEKPWKVHVKWILDTDVFNEWMNEEDYEVDENRKPVSFRQRIP
TKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPAESRKKSGKKGQASLYGKRRSQKEE
DEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEEAVTTGGK
EDEDPSKGDPSRSVDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKS
KTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDP
ESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPIDLQNFGL
RTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHF
LRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEE
FSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGTEEEKM
ETDPDGQQPEKAENKVENESDEGDKTQDGENEKNSEKEQDSEVSEDVKPEEKENEENKEL
TDTCKERESDTGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLVE
TQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQQ
QHGQNPQQAHQHSGGPGLAPLGAAGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQIPGPG
SMIPGQPMPGRMIPAVAANIHPTGSAPAPPGMPPMPGNILGPRVPLTAPNGMYPPPPQQQ
QPPPPADGVPPPPAPGPPASATP
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgaccgcgggcggaggttcgggagcggcagcaggcgccgtgggtgcagggggt
gcggcggcggcctccggcctggccgtgtaccggaggaaggacgggggcccggccagcaag
ttttgggagagcccggacacggtgtcccagctggattcggtgcgagtctggctgggcaag
cactacaagaagtatgttcatgcagatgctcctaccaataaaacgctggctggactggtg
gtgcagcttcttcagttccaagaagacgcctttgggaagcatgtcaccaacccagctttc
accaaactgcctgcaaaatgttttatggatttcaaagctggaggcaccttgtgtcacatt
cttggggcagcttacaagtacaaaaatgaacaggggtggcggagatttgatcttcagaat
ccatctcgaatggatcgtaatgttgaaatgttcatgaacattgaaaaaacattggtacag
aataattgtctgactagacccaacatctacctcattccagacattgatttgaagttggcg
aataagttgaaagatatcatcaaacggcatcaggggacatttactgatgagaagtcaaaa
gcttcccaccatatttatccatatccttcctcacaagaggatgaggagtggctgaggccg
gtgatgaggagagacaagcaggtgctagtgcactggggtttctacccggacagctatgac
acttgggtccacagtaatgatgttgatgctgaaattgaagatccaccaattccagaaaag
ccatggaaggttcatgtaaaatggatattggacactgatgttttcaatgaatggatgaat
gaagaggattatgaagtggatgagaacaggaagccagtgagctttcgtcagcgaattcca
acaaagaacgaagagccagtcagaagtccagagaggagagatagaaaagcatcagctaat
gctcgcaagaggaagcattccccttctcctccacctcccacacctgcagaatcccggaag
aagagtggaaagaaaggacaagctagcctttatgggaagcgtagaagtcagaaagaagaa
gatgagcaagaagatcttaccaaggacatggaagacccaacacctgtaccaaatatagaa
gaagtggtcctccctaagaacgtaaatccaaagaaagatagtgaaaacacacctgttaaa
ggaggcacagtggcagatctagatgagcaagatgaagaagcagttacaacaggaggaaag
gaagatgaagatcctagcaaaggtgatccgagtcggtcagttgacccaggtgaagataat
gtcacagaacagaccaatcacatcattatccccagctatgcatcctggtttgattataat
tgtattcatgtgattgaacggcgtgctcttcctgagttttttaatggaaaaaacaaatcc
aagactccagaaatatacttggcatatcggaattttatgattgacacataccgtctaaac
ccccaagaatatttaaccagcactgcttgtcggagaaacctgactggagatgtgtgtgct
gtgatgagggttcatgccttcttagaacagtggggtcttgttaactaccaagttgatcca
gagagtcgacccatggcaatgggccctcctcctactcctcacttcaatgtgctagctgat
acaccctcagggcttgtgcctctacatcttcgctcaccacaggtccctgctgctcaacag
atgttaaattttcctgagaagaacaaggaaaagccaattgatttgcagaactttggtctt
cgaactgacatttactccaagaaaacactggcaaagagtaaaggtgctagtgccggaagg
gagtggacagaacaggagacccttcttctcctcgaggccctggagatgtacaaggatgat
tggaataaagtctcagaacatgttggaagccgtactcaagatgaatgcatcctccacttt
ttgagacttcccattgaggacccataccttgaaaattcggatgcttcccttgggccgcta
gcttaccagcctgtccctttcagccagtcaggaaaccctgtgatgagtactgttgccttt
ttagcgtctgtggttgatcctcgtgtagcttctgctgcagcaaaagcggctctggaggag
ttttctcgggtccgtgaagaagtgcccctagaattggttgaagcacatgtcaagaaagtt
caagaagctgcaagagcctctgggaaagtggatcccacctatggcttggagagcagctgt
attgcaggcactggccctgatgagccagagaagctcgaaggaactgaagaagaaaagatg
gaaacagatcctgatggtcagcagcctgaaaaggcagaaaacaaagtggaaaatgaatcg
gatgaaggtgataaaacccaagatggagaaaatgaaaaaaacagtgagaaggaacaagat
agtgaagttagtgaggatgtcaagccagaagaaaaggaaaacgaagagaacaaagaactc
actgatacgtgtaaagaaagagaaagcgataccgggaagaagaaagtggaacacgagatt
tctgaaggaaatgttgccacagccgcagcagctgctctggcctcagctgctaccaaagcc
aagcacctggctgctgtggaggagagaaagatcaagtccctggtagctctcctggttgag
acacagatgaagaaattagagatcaagttgcgacatttcgaagagctggagactattatg
gacagagagaaagaagcgctagaacaacagagacagcagttgctcactgagcgccagaac
ttccacatggaacagttgaaatatgctgagttacgtgctcggcaacaaatggagcagcag
caacatggccagaaccctcagcaagcacaccagcactcaggaggccctggtctggctcct
cttggagcagcagggcatcctggcatgatgcctcatcagcagccacctccctaccctttg
atgcaccatcagatgccgccaccccatcctccccagccaggtcagataccaggccctggc
tccatgatacctgggcagcccatgccaggccgcatgattcctgcagtggcagccaacatc
caccctactgggagtgcccctgcccctcctggcatgcctccaatgcccggaaacatctta
ggaccccgggtacccctcacagcaccaaacggcatgtatcctcctccaccacagcagcag
cagccgcctccacctgcagatggggtccctccacctcctgctccaggcccaccagcctcg
gccactccctag
DBGET
integrated database retrieval system
