Meriones unguiculatus (Mongolian gerbil): 110564719
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Entry
110564719 CDS
T05884
Symbol
Supt5h
Name
(RefSeq) transcription elongation factor SPT5 isoform X2
KO
K15172
transcription elongation factor SPT5
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Pathway
mun03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110564719 (Supt5h)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mun03021
]
110564719 (Supt5h)
03019 Messenger RNA biogenesis [BR:
mun03019
]
110564719 (Supt5h)
Transcription machinery [BR:
mun03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
110564719 (Supt5h)
RNA polymerase I system
110564719 (Supt5h)
Messenger RNA biogenesis [BR:
mun03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
110564719 (Supt5h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW4_SPT5
KOW
KOW2_Spt5
KOW5_SPT5
Spt5-NGN
KOW7_SPT5
KOW6_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
DUF3912
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
110564719
NCBI-ProteinID:
XP_021517903
LinkDB
All DBs
Position
14:complement(3640829..3666534)
Genome browser
AA seq
1083 aa
AA seq
DB search
MSDSEDSNFSEEEDSERSSEAEEAEVEEDRRSAAGSEKEEEPEEEEEEEEEYDEEEEEED
DDRPPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDEDRSGA
RRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLWTV
KCKIGEERATAISLMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGV
GNLRLGYWNQQMVPIKEMTDVLKVVKEVANLKPKSWVRLKRGVYKDDIAQVDYVEPSQNT
ISLKMIPRIDYDRIKARMSLKDWFAKKKKFKRPPQRLFDAEKIRSLGGDVASDGDFLIFE
GNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTEGTGKEREHNFQP
GDNVEVCEGELINLQGKVLSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIA
GRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQL
DPRTVGVIVRLERETFQVLNMHGKVVTVRHQAVTQKKDNRFAVALDSDQNNIHVKDIVKV
IDGPHSGREGEIRHLYRSFAFLHCKKLVENGGMFVCKARHLVLAGGSKPRDVTNLTVGGF
TPMSPRISSPMHPSGEGQHGGFGSPGGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVK
DATESTARVELHSTCQTISVDRQRLTTVDSQRPGGMASTYGRTPMYGSQTPMYGSGSRTP
MYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPT
PSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPS
PSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSPGGYNP
HTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMCSVYLKDSEKVVSI
SSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIIRMDLEDQQIKILNLRFLGKL
LEA
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagcgaggacagcaacttctcggaggaggaggacagcgagcgcagcagcgag
gcggaggaggccgaggttgaggaagaccgacggagtgctgcaggcagtgagaaggaagaa
gagcccgaggaagaggaggaggaagaggaagaatatgacgaggaggaagaggaggaagat
gatgaccggccccctaagaaaccacgccatgggggcttcattttagatgaggctgatgta
gatgatgaatatgaagatgaggaccagtgggaggacggagctgaagatatcctggagaaa
gaagagattgaagcctccaatattgataatgttgtcttggacgaggaccgctctggggct
cgtcgtctgcagaatctctggagggaccagagagaagaagagctaggcgagtactacatg
aagaagtatgccaagtcatctgtcggggagaccgtgtatggaggttccgatgagctctcg
gatgacatcacccagcagcagctgcttccaggagtcaaggaccccaacctgtggactgtc
aagtgtaagattggggaggaacgagccacagcaatttccctgatgcgcaaattcatcgct
taccagttcacagacacgcccctgcagattaagtccgtggtcgccccagagcacgtgaag
ggctacatctacgtggaggcctacaaacagacccacgtgaagcaggccatcgagggtgtg
ggcaacctgcggcttggctactggaaccagcagatggtgcccattaaggagatgaccgac
gtgctcaaggtggtgaaggaggtggccaacctgaagcctaagtcctgggtccgcctcaag
cggggcgtctacaaagacgacattgctcaggtggactacgtggagcccagccagaacacc
atctccctcaagatgatcccacgcatcgactacgaccgcatcaaagcccgcatgagcttg
aaagactggtttgccaaaaagaagaagttcaagcggcccccacagaggctctttgatgct
gagaagatcaggtccttggggggcgatgttgcttctgatggtgacttcctcatctttgag
gggaaccgctacagccggaagggcttcctgttcaagagcttcgccatgtctgctgtgatt
acagagggcgtgaagcccaccctgtcagagctggaaaagtttgaagatcagcctgagggc
atcgacctggaggtggtgactgaaggcacagggaaggagcgggagcacaatttccagcct
ggggacaatgtggaagtgtgcgagggtgagctcatcaacctgcagggcaaggtcctcagc
gtggatggcaacaagatcaccattatgcccaagcacgaggacctcaaggacatgcttgag
ttcccagcccaggaactgcggaagtacttcaagatgggggaccatgtaaaagtgatcgcc
ggccgattcgagggcgacacaggtctcattgtgcgggtggaagagaactttgtcattctt
ttctcagacctcaccatgcatgagttgaaggtgcttcccagggacctgcagctctgctca
gagacagcctcaggtgtggatgtcgggggccagcatgagtggggtgagctggtgcagctg
gacccccgcaccgtgggtgtcatcgtgcggctagagcgagagaccttccaggttttgaac
atgcacgggaaggtggtgaccgttaggcaccaggcagtgactcagaaaaaggacaaccgc
tttgctgtggccctggactccgatcagaacaacatccatgtgaaggatattgtcaaggtc
attgacggcccccactcaggccgagagggtgagatccgccatctgtaccgaagctttgcc
ttcctgcattgcaagaagctggtggagaacggtggcatgtttgtctgtaaggcacgacac
ctggtgttggctgggggctcaaagccccgggatgtgaccaatttaactgttggtggcttc
actcctatgagcccccggatcagcagccccatgcaccccagtggtgaaggtcagcatggt
ggctttggcagcccaggtggtggcatgagcaggggtcgagggcgaagagacaacgagctc
ataggccagactgtgcgtatatcccagggaccctacaaaggctacattggtgtggtgaag
gatgccacagagtccacagcccgagtggagctgcactctacttgtcagaccatctctgtg
gaccgccagcggctcactacggtcgactcccagcgtccaggtggcatggcatccacctac
ggacggacgcccatgtatggctctcagacacccatgtatggctctggctcccgaacaccc
atgtatggctcccagacgcccttgcaggatggtagccgcacccctcactacggctcgcag
acgcccctgcatgacggtagccgcacccctgctcagagtggggcctgggaccccaacaac
ccgaacacgccttccagggctgaggaggaatacgagtatgcctttgacgacgagcccacc
ccatccccacaagcatacgggggaaccccgaatccccaaacacccggctacccagaccca
tcatccccccaggtcaatccacagtacaacccgcagacaccagggacgccggccatgtac
aacacggaccagttctccccctacgctgccccctctccacaggggtcctaccagcccagc
cccagcccccagagctaccaccaagtggcaccaagtccagcaggctatcagaacacccat
tccccagccagctaccaccccacgccgtcacccatggcctaccaggctagtcccagccct
agccctgttggctacagtccgatgacccctggagcgccttctcctggaggctacaatccg
cacaccccaggctcgggcatcgagcagaactccagcgactgggtgaccacggacatccag
gtgaaggtgcgagacacctacctggacacacaagtggtggggcagacaggcgtcatccga
agcgtcacgggaggcatgtgctccgtgtacctgaaagacagtgagaaggtggtcagcatc
tccagtgaacacctggagcccatcacccccaccaagaacaacaaggtgaaagtgattctg
ggcgaggaccgggaggccactggggtcctgctgagtattgatggcgaggatggcatcatc
cgaatggacctggaagaccagcagatcaagatcctgaacctccgtttcctagggaagctc
ctggaggcctga
DBGET
integrated database retrieval system
