Meriones unguiculatus (Mongolian gerbil): 110565435
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Entry
110565435 CDS
T05884
Symbol
Patl1
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Pathway
mun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110565435 (Patl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mun03019
]
110565435 (Patl1)
Messenger RNA biogenesis [BR:
mun03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110565435 (Patl1)
mRNA degradation factors
5'-3' decay
Decapping complex
110565435 (Patl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
110565435
NCBI-ProteinID:
XP_021518798
LinkDB
All DBs
Position
1:29934789..29965637
Genome browser
AA seq
770 aa
AA seq
DB search
MFRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKL
PVTADEQTGNGERDEMDLLGDHEENLAERLSKMVIENELEDPAIMRAVQTRPVLQPQPGS
LNSSIWDGSEVLRRIRGPLLAQEMPTVSVLEYALPQRPSQGPEDDRDPSERALPRRSTSP
VIGSPPVRAVPIGTPPKQMAVPSFNQQILCPKPVHVRPPMPPRYPAPYGERMSPNQLCSV
PNSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGFVGSPLAAMNPKL
LQGRVGQMLPPAPGFRAFFSAPPPATPPPQQHPPGPGPHLQNLRPQAPMFRPDTTHLHPQ
HRRLLHQRQQQSRNQHRNLNGAGDRGSHRASHQDHLRKDPYANLMLQREKDWVSKIQMMQ
LQSTDPYLDDFYYQNYFEKLEKLSAAEEIQGDGPKKERTKLITPQVAKLEHAYKPVQFEG
SLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLVIIEKTYSLLLDVEDYE
RRYLLSLEEERPALMDERKHKICSMYDNLRGKMPGQERPSDDHFVQIMCIRKGKRMVARI
LPFLSTEQAADILMATARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPSVTVTSLLQQLM
NLPQSATAPAPSNPHLTAVLQNKFGLSLLLILLSRGEDLQSSDPAIESTQNNQWTEVMFM
ATRELLRIPQAALAKPISIPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctacgagtctttggaggattgtcctctggatgaagatgaggatgcttttcag
ggcctaggagaagaagatgaagaaattgatcaattcaatgatgatacatttgggtcaggt
gcagttgatgatgattggcaggaagcacatgagcgcttggctgagctggaagagaagctt
cctgtgacagccgatgaacaaacaggcaatggagaaagggatgagatggacttgttgggt
gaccatgaggagaatttagcagaaaggctcagtaagatggtgattgaaaatgagctagaa
gatcctgctatcatgagggcagtgcagaccaggccggttttacaaccacaacccggaagt
ctgaattctagcatctgggatggatctgaagttctgaggcgaatccgtggaccattactt
gctcaggaaatgcctacagtgtctgtattagaatatgccttgcctcagaggccctcccag
ggcccagaagatgatcgggacccttctgagcgagctttaccaaggcgatcaacatcacct
gtcattggaagtcctcctgttagagctgttcctataggcaccccacctaagcagatggct
gttcccagcttcaaccaacagattctatgtccgaagcctgttcatgttcggcccccaatg
ccaccacgttatcctgctccctatggtgagaggatgtctccaaaccagctttgcagtgtc
ccgaactcctccctcctgggccacccctttcctcctagtgttcctcctgtactcagtccc
ctgcagagagcacagcttcttggaggagcacagctacagcctggacggatgtctcccagc
cagtttgcacgagtccctggatttgttggtagcccactggctgccatgaatcctaagttg
ctacaagggcgagttgggcagatgcttcccccagcaccaggcttccgtgccttctttagt
gctccaccccctgctacgccacctccacagcagcatcctcctggcccaggacctcacctg
caaaacctaagacctcaggccccaatgtttagaccggacacaactcaccttcacccacag
caccggcgcctgttgcatcagaggcagcagcagagtagaaatcagcatcggaatctcaac
ggtgccggagacagaggaagtcaccgggccagtcatcaagatcatctccggaaggatcca
tatgctaatctcatgttgcagcgggaaaaggattgggtctctaaaatccagatgatgcag
ctgcagagcactgatccctacctggatgatttctattaccagaattactttgaaaaactg
gagaaattgtcagctgctgaagaaatacaaggtgatggccctaagaaggagcgtaccaag
ctcatcaccccccaggtggccaaactggagcacgcgtataagcctgtgcagtttgagggc
tctttggggaagcttactgtctctagtgtgaataatcctcgaaagatgatcgatgctgtt
gtgacatctcggagtgaggatgatgaaacaaaagaaaaacaagttcgggacaagagaaga
aaaacccttgtcataattgagaaaacctatagtttactccttgatgtggaggattatgaa
agacgctatctcctaagtctagaagaagagcggcctgccctgatggatgagagaaagcac
aaaatctgtagcatgtatgacaacctgaggggcaaaatgcctggacaagagaggccaagt
gatgaccactttgtacagatcatgtgtatccgaaaagggaagagaatggttgcccgtatt
ctccctttcctctccacagagcaagcagctgacattctcatggcaactgctaggaacctc
cctttccttatcaagaaggacgcacaagatgaggtgctgccatgcttactgagtcccttc
tctctcctcctctatcatcttccttcagtgactgtcaccagccttctgcaacagctaatg
aacctacctcaaagtgcaactgcaccagcaccctccaatcctcacctcactgctgtgctc
cagaacaagtttggcttgtcactactcctaatcctcctaagccgtggggaagacctacag
agttcagaccctgctatagaatcaacgcaaaataaccaatggacagaggtgatgttcatg
gcaacccgagaactgctacggatcccccaagcagccctggccaagccaatctctataccc
acaaatttagtgtcccttttctctcgctatgttgaccggcagaaactgaacttgctggag
acaaaactgcagctggttcaggggatacgataa
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