Microcaecilia unicolor: 115456474
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Entry
115456474 CDS
T09142
Symbol
DDX52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52 isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
muo
Microcaecilia unicolor
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
muo03009
]
115456474 (DDX52)
Enzymes [BR:
muo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115456474 (DDX52)
Ribosome biogenesis [BR:
muo03009
]
Eukaryotic type
90S particles
Helicases
115456474 (DDX52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Helicase_C_2
AAA_19
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
115456474
NCBI-ProteinID:
XP_030041420
UniProt:
A0A6P7WT94
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Position
13:43866491..43902220
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AA seq
602 aa
AA seq
DB search
MHQCVVVKIKDKEFGSQHVDGLDFFGNRQKSEGSERSPNDKVKHSLLKKKEVEPFKSELT
RKRNREQHELEKKGKKKRKSQGMVIDSSGKEAESYGILWMSSLEAKLKDTGNLREKKLTA
EKMEQRRQEKVNYFRKKHKIYVQGTDIPEPVATFEQLGKEYNIHPRIMQNIQESGFRLPT
PIQMQAVPVMLHGREILACAPTGSGKTLAFSIPILMHLKQPMNKGFRALIVSPTRELASQ
TQRELVKLSEGTGFRIHMIHKAAEAAKKFGRKSAKRFDILVTTPNRLVYLLKQDPSIIDL
SSVEWLVVDESDKLFEDGKTGFREQLASIFLACTSHIVKRAMFSATFAHDVENWCKLHLD
NVISVSVGARNSAVETVEQELLFVGSETGKLLAMRDLIKKGFLPPVLVFVQSVDRAKELF
HELIYEGINVDIIHADRTQQQRDSVIQNFRAGKIWVLICTALLARGIDFKGVNMVINFDF
PTSSVEYIHRIGRTGRAGHKGKAISFFTEDDKPLIRSIANVIQQAGCPVPDYIKHFRKLQ
TKQKKRMIKNPLKREQIRTTPQYFLEQAKRRNKMNQENHKKKKNTKDLPNTDQPQMQSST
ES
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgcaccagtgcgtggtggttaaaattaaagacaaggaattcggctctcaacatgtggac
ggactcgatttttttggtaacagacaaaaaagtgagggaagtgagagaagcccgaatgat
aaagtaaagcattctttacttaagaaaaaagaagttgaacccttcaaaagtgaattaaca
aggaaaagaaacagagaacaacatgaacttgaaaagaaagggaagaaaaaaagaaaaagt
caaggaatggtaatcgattcaagcggtaaggaggcagaaagttatggtatactctggatg
tcctccttggaagcaaaactgaaagatactggaaacttgagagaaaaaaaactcacagca
gagaaaatggagcaacgtagacaagaaaaggtaaactatttcaggaagaagcacaagatt
tatgttcaaggaacagatattcctgagcctgttgccacatttgagcaacttggtaaggaa
tataatatccatcctaggatcatgcagaacattcaggaatctggctttcgccttcccacc
ccaattcagatgcaggcagttccagttatgttacatggacgtgagattctggcctgtgct
cccactggctctgggaagaccttggctttcagcatccccatcttgatgcatctgaaacaa
cccatgaataagggctttcgggcattgattgtatcgcctacaagagagctagcgagccag
acacagcgagaactagtgaaactctctgaggggacaggcttcagaatacacatgatccat
aaagctgctgaggctgcaaagaagtttggtcgaaaatcggcaaaaagatttgatatacta
gtgacaactcctaacagactggtttatttattaaaacaagacccgtcaataattgacctt
tccagtgttgaatggttggttgttgatgaatcggacaaattgtttgaggacgggaaaact
ggtttcagagaacagctggcatccattttcctggcctgtacatcgcatattgtcaaaaga
gccatgtttagtgcaacatttgctcatgatgtggaaaactggtgcaaactgcatctcgac
aatgtcatttccgtgtcagtcggcgctagaaactcagctgttgagactgtagaacaagaa
cttttgtttgttggatctgaaacgggaaagctgctggcaatgagagatcttatcaaaaag
ggattcctgcccccagtacttgtatttgttcagtccgtagacagagcaaaagagcttttc
catgagctcatatatgaaggtattaacgtggacatcattcatgctgatagaacacagcag
cagagagacagtgttatacagaatttccgagctggaaagatctgggtgttgatctgcaca
gctctattagcacgaggcattgactttaaaggcgtaaacatggtaatcaactttgacttc
ccaacaagctcggtggaatacatccatcggataggccgcactggaagagcaggacacaaa
ggaaaagcaattagtttcttcaccgaagatgataaacctttaataagaagtatagccaat
gttattcagcaagccggctgtcctgtgccagattatataaagcatttccgaaaactgcag
actaagcagaagaagagaatgatcaagaaccctctgaaaagagaacagatccgcacaaca
cctcagtacttcttggaacaggccaagagaagaaacaaaatgaaccaggaaaatcataaa
aagaagaaaaatactaaggacttgccaaatactgaccagcctcagatgcagagttcaaca
gagagctaa
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