Microcaecilia unicolor: 115456853
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Entry
115456853 CDS
T09142
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
muo
Microcaecilia unicolor
Pathway
muo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115456853 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
muo03019
]
115456853 (CLP1)
Enzymes [BR:
muo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
115456853 (CLP1)
Messenger RNA biogenesis [BR:
muo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
115456853 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
AAA_18
TniB
MMR_HSR1
CbiA
CTV_P13
ATP_bind_1
AAA_22
AAA_24
Sigma54_activat
AAA_16
Motif
Other DBs
NCBI-GeneID:
115456853
NCBI-ProteinID:
XP_030042051
UniProt:
A0A6P7WLW5
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All DBs
Position
1:complement(653243519..653271626)
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AA seq
426 aa
AA seq
DB search
MAEESGEEKRTAAVKYELEKETELRFEVEASQTVQLELLSGMAEVFGTELTRNKKFNFDA
GCKVAVFTWHGCTVQLSGHTEVAYISKDTPMLLYLNTHTALEQMRQQAEKEDERGPRVMV
VGPTDVGKSTVCRLLLNYGVRMGRRPTFVDLDVGQGAISIPGTMGALYIERPADVEEGFS
VQAPLVYHFGSTTPGTNIKLYNKITSRLAEIFNQRCEVNRRASVSGCVINTCGWVKSSGY
QALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRIVLLPKSGGVVERSKDFRRECRDD
RIREYFYGFRGCFYPHAFDVRFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGR
DMVHHLLSVSTADSIEENISETSVAGFIVVTGVDLERQVFTILSPAPRPLPKGILLIMDI
RFMDLK
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagtcaggtgaggagaagcgaacagcagcagtaaagtatgaactagagaaa
gagacagagttgcgctttgaagtagaagcatcgcagacagtccagctggaactcctgtca
ggcatggctgaagtctttggcactgagctgacccgcaacaagaaatttaactttgatgct
ggttgtaaggtggcagtgttcacttggcatggatgcactgtgcaactgagtgggcatact
gaggtggcctacatttccaaggacacacctatgctgctatatctcaatacacacactgca
cttgagcagatgaggcagcaggcagagaaggaggatgagagagggcctcgggtgatggta
gtgggaccgactgatgttggcaagtccactgtatgtcgtttgctgctgaactatggtgtg
cgcatggggcggcggcccacttttgtggatctagatgtggggcagggtgccatctccatc
ccagggaccatgggagctctatacattgagcgcccagcagatgtggaggagggcttctca
gtacaggcaccactggtatatcactttgggtcaactactcctggcaccaacattaaactg
tacaacaagatcacatcgcgcctagcagaaatcttcaaccagcgctgtgaggtgaacaga
cgggcatcagtcagtggttgtgtcattaacacatgtggctgggtgaagagttcaggttac
caggcacttgtccatgcagcttcagcctttgaggtagatgtagtggtggtgctagaccag
gagcgactctacaatgaactgaagcgtgatctcccgcactttgtgcgcattgtcttgcta
cccaaatctggtggtgtggtggagcgttccaaggacttccggcgtgaatgccgggatgac
cgcatccgtgagtatttctatggcttccggggctgcttctaccctcatgcttttgatgtg
cgcttttcagatgtgaagatttacaaagtgggagcaccaaccattccagattcctgtctg
ccgctgggaatgtcacaagaggacaatcaactgaagcttgtgccagtaacaccaggtaga
gacatggtgcaccatctgttgagtgtcagcactgctgacagcatagaagaaaacatttct
gagactagtgtggcaggcttcattgtggtgacaggtgtggacctcgagaggcaggtgttc
accatactgtccccggcaccaagacctttgcccaagggcatcctgctcatcatggacata
cgctttatggaccttaagtaa
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