Microcaecilia unicolor: 115460364
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Entry
115460364 CDS
T09142
Symbol
SOX17
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
muo
Microcaecilia unicolor
Pathway
muo04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
115460364 (SOX17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
muo03000
]
115460364 (SOX17)
Transcription factors [BR:
muo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
115460364 (SOX17)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
115460364
NCBI-ProteinID:
XP_030046007
UniProt:
A0A6P7WS52
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Position
1:493586813..493588781
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AA seq
388 aa
AA seq
DB search
MSSPDAGYASDEQQSQGQCSVARMMPAVGHCQWAAESLSPAVAEGKLKNETAPGNRSKAE
PRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKSLSLVEKRPFVEEAERLR
VQHMQDHPNYKYRPRRRKQVKRIKRAEPGFLHSIAEQQGSRLGSEGRMCLENLGYHEQEY
HSLQPNQLLSMSQYRDCQAMAPHYDNYNIPTPETSPLDMVETDPVFFASHFQENCQMPYN
YHQASDYSSQQESHTNPTLARHLSPIDQMVQVNSVQSVMSCQASPHIYYNQLCPPGNVRN
HQVQQAGQPSPPPESHTMDNLGHLQQAELLGDVDRSEFEQYLHFISGKPEAGLVFHGHET
NLPTADNLTSSVLSDASSAVYYCNYSNE
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccccgatgcgggttacgccagtgacgagcagcagagccaaggacagtgctca
gtggccaggatgatgcccgccgtgggtcattgccagtgggcggccgagtctctgagcccc
gccgtggcagaggggaagctgaagaacgagacggcacccggcaaccgcagcaaagccgag
ccccgcatccgccgccccatgaacgccttcatggtctgggctaaggacgagcgcaagagg
ctggcgcagcaaaaccccgacctgcacaacgccgagctcagcaaaatgttgggcaaatcc
tggaaatctctgtccttggtagaaaagagaccgtttgttgaagaggctgaaaggctgagg
gtgcagcacatgcaggaccacccgaactacaaatacaggccgagaagaaggaaacaagtg
aagagaatcaagcgggccgagcccggcttcttacacagcatcgctgagcagcaaggaagc
aggctgggctctgagggcagaatgtgtctggagaacctgggctaccatgagcaggaatat
cactcactgcagcccaaccagctgctatctatgtcccagtacagggactgccaggccatg
gctccacactatgacaattataacatacctactcccgagacttcccctctggacatggtt
gagacggatcctgtgttttttgcatctcattttcaggagaattgccaaatgccttacaac
taccatcaagctagcgactactcttcccaacaggaaagccataccaaccccaccctagca
aggcacctgtcccccattgaccagatggtgcaggtgaactctgtccagagtgtgatgagt
tgtcaggcctcaccacacatttactacaaccagttgtgcccacctggcaatgtgagaaac
caccaagtacagcaagctgggcagccttctcctccacccgagtcccacaccatggacaac
ctcgggcacttgcagcaagctgagctcttgggggatgtagatcgcagtgaatttgagcag
taccttcattttatctctggtaaaccggaggcagggcttgtgtttcatgggcacgagaca
aatttgcctactgcagataatctgacatcttctgtgctttcagatgcaagctctgctgta
tattattgcaactactccaacgagtga
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