Microcaecilia unicolor: 115461337
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Entry
115461337 CDS
T09142
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
muo
Microcaecilia unicolor
Pathway
muo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
115461337 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
muo03021
]
115461337 (POLR1A)
Enzymes [BR:
muo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
115461337 (POLR1A)
Transcription machinery [BR:
muo03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
115461337 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
115461337
NCBI-ProteinID:
XP_030046923
UniProt:
A0A6P7X390
LinkDB
All DBs
Position
2:478254380..478522185
Genome browser
AA seq
1726 aa
AA seq
DB search
MVLSGAVIPWRRLRGVSFGIYSAGEIRKLSVKAITNPRYLDNVGNPAISGLYDLALGPSD
FKEVCSTCAQDFNNCPGHLGHIELPLAVYNPLFFDRLYILLRGSCFNCHMLTCSRAVVHL
LLNQLKLIEAGDLQSVYELECVLHRFLEGNPNATGNEIQEMLDPYTCELLQNNPVGVESS
HVKNVCECRSRLIGEFWKTHMKAKRCPHCKTGKSVLRKEHNSKLTITYPSNVHKTSRKGR
GVAQQPDGIDEMQLGKRGYLTPDTAKEYIMALWENEGFFLSHLFAGLETSGNCEAVFSPD
MFFLDLVVVPPSRYRPLNRLGDQMFTNGQTVNLQAVIKDVGMIQKLLALMAQEQQLMPQP
LETETEVENQSSELMDRAFLSMIPGQTLTDKLYNAWIRLQSHVNIVFDSDMDKLMTEKYP
GIRQILEKKGGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPW
NVQELRQAVMNGPNTHPGATMVINEDGSRTALSSTSQSQREAVAKQLLTPSTGAHKGGLK
IVSRHVKNGDILLLNRQPTLHRASIQAHRARILPGEKVLRLHYANCKAYNADFDGDEMNA
HFPQSELGRAEAYVIACTDEQYLVPKDGKPLAGLIQDHMVSGASMTIRGCFFTREQYMEL
VYRGLTDKKGRVKTLMPAIIKPYPLWTGKQVVSTLLINVIPENRIPLNLSGKAKIGGKAW
VKEPPRAVPGFIPDPMCESQVIIRSGELLCGVLDKAHYGSSAFGLVHCCHELYGGETSGK
LLTCLARLFTAYLQLYRGFTMGVEDILVRPRADVKRQKIVAESTHCGARAVRAAFSLPNT
ATTDEIRGKWQDAHLSKDQRDVNMVDLKFKEEVNHFSNKINKVCMPLGLHRRFPENNLQM
MVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMPSGKSLPCFEPYDFSPRSGGFVTGRFL
TGIKPSEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVIQ
FLYGEDGLDIPKTQFLQSKQFPFIADNYEVIKESKNLNDVLARMNPEQVTKHFQVLKKWK
AKHPTTSQRQGAFLLFSQKKKARENALSQTGDLINGRDLATKQLLERWYSVDEKTENKYR
RKSARFPDPCLAIYRPDIFFGSVSETFENKVDNYIEEWETQDSQEYQRSELTLDRLKTLL
HLKWQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVAS
ANIKTPMMSIPVLNTKKAHKKVKKLKKQLTRVCLADVLHKIDVQEAFRVEGKLSKHHVYQ
IKFHFLPYEHYQQEKCLKPEHILHYMETRFFKLLLETIKKRSNKLASFRAVSARKVTRKD
LDDDSGELQVDLEQVDGESENAESGKIVDGEADEGDADATEAKRKQKQDEEIDYENEEDE
DEESEESTEEREEEEPSSLFNKSSSNAEQEMESSLSVTEESLPPAPSAARSERRKSGSQT
AGVSEQRINAVLDSHQAVEHYAYDTEEGLWCEITLKLPLMKVYFDISSLVTFLAQNTIIH
ETRGITRCLLNEATNKHGEKELVLNTEGINLPELFKYADILDLRRLYSNDIHAMARTYGI
EAALRVIEKEIKDVFAVYGIEVDPRHLSLVADYMCFEGVYKPLNRIGMQSNSSPLQQMTF
ETSYKFLKEATMMGAHDELRSPSACLVVGKVVKGGTGLFDLKQPLK
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atggtgttgtctggtgcagttattccttggcggcgattgcggggcgtctcttttggaatt
tattctgccggagagatcagaaaattaagtgtgaaagccattacgaaccctcgctacttg
gataatgtgggaaacccagctatcagtggactgtatgacttggcattgggacctagtgac
ttcaaagaagtgtgttctacctgtgcacaggattttaacaactgcccgggacatctgggt
catatcgaacttccactggcggtctataatcctctgttctttgatagactatatattctg
cttcggggctcctgtttcaactgccacatgctgacatgttctcgtgctgttgtgcatttg
ttgctgaaccaactgaaactcatagaagctggagaccttcagtcagtgtacgagctggag
tgtgtactgcatcggtttcttgaaggaaatccaaatgctactggaaatgagattcaggaa
atgctggacccatacacgtgtgaactattacagaataacccagtaggagtagagagctcg
catgtgaaaaatgtctgtgagtgcagaagtagactgattggagaattctggaaaactcac
atgaaagcaaagagatgcccacactgcaagactggaaaatccgtcttgcgaaaagagcac
aacagcaaactgacaatcacttacccatccaatgtacacaaaacatctagaaaaggcaga
ggagtggcacagcagccagatgggattgatgaaatgcagctaggaaaaagaggttacttg
acacctgatactgccaaggaatatatcatggctttatgggaaaatgaaggtttcttccta
agtcaccttttcgctgggctggagactagtgggaattgtgaggctgttttcagcccagat
atgttcttccttgatctcgtcgtggtgccaccttcccggtatcgacctttgaatcgtctt
ggagatcagatgttcactaatggtcagacagtgaacctgcaggccgtgataaaggatgtt
ggaatgattcagaagctactagctctcatggctcaggagcaacaactgatgccccagccc
ttggagactgaaactgaggtggaaaatcagtcttcagaacttatggatcgtgctttcctg
tccatgatcccaggacagaccttaacagataaactctacaatgcctggatacggctacag
agtcatgtcaatattgtgtttgacagtgacatggacaagctaatgacagaaaaataccct
ggtatccgtcagatattggaaaagaaggggggcctgttcaggaagcatatgatgggaaag
cgtgtggactatgccgcccgctctgttatctgccctgatatgtacatcaacaccaatgaa
attgggattcctatggtgtttgctaccaagctgacctatcctcaaccagttactccctgg
aatgtgcaggagctcaggcaggcagtcatgaatggacctaacacgcacccaggtgccacc
atggtgataaatgaagatggctcccgcacagctctaagctcaacaagccagagccagaga
gaggccgtggccaagcagctcctcactccgtcaacaggagctcacaaaggaggattgaag
atagtatctcgtcatgtgaaaaatggggatatccttttactgaatcgtcagcccactctc
cacagagcgtccatccaggctcaccgtgcccgaatcttaccaggagagaaagtgctgcga
cttcactatgctaactgcaaagcctataatgcagactttgatggggatgaaatgaatgct
cacttcccacagagtgaactgggccgagctgaagcctatgtaatagcatgcacagatgag
cagtacttggttcccaaggatgggaagcctttggcaggtttaatccaggatcatatggtc
tctggtgccagcatgaccattcgtggctgcttttttactcgagagcagtacatggagctg
gtttatcgagggctgacagataaaaagggacgtgtgaaaactctaatgccagctattata
aaaccatatccactttggacaggaaaacaggttgtctctacgttgctaataaacgtaatc
ccagaaaatcgcatccctttgaacttgtcaggaaaagctaagattggtgggaaagcctgg
gtgaaagaacctccccgggcagttcctgggttcattccagatcctatgtgtgaatctcag
gtcattattaggagtggggaattgctctgtggtgttctggacaaggctcactatggcagc
tctgccttcggtttagtccattgttgccatgagctgtatggcggggaaaccagtggcaaa
ctgcttacttgcctggctcgccttttcactgcatacctgcagctctacagaggattcacc
atgggagtggaagacattttggtcagacccagagcagatgtaaaaagacaaaaaattgtt
gcagaatccacccactgtggcgctagggcggtcagagctgcattcagtctgcccaacacc
gcaaccaccgatgagattcgcggaaaatggcaagatgcccacctcagcaaagaccagagg
gatgttaacatggttgacctgaaattcaaggaggaagtaaatcatttcagcaataagatt
aacaaggtgtgcatgcctcttggtcttcataggcgcttcccagagaacaacttacagatg
atggttcagtctggagccaagggatccactgtaaataccatgcagatttcttgcctgttg
ggtcagattgagttagaaggtcggagacccccactgatgccttctgggaagtcgctgcca
tgttttgagccgtatgacttttctcctcggtcgggtggatttgtcactggcagatttctc
accggtatcaaaccttctgaattcttctttcactgtatggccggtagggagggtcttgtt
gacactgctgtcaaaaccagtcgctctggataccttcagaggtgcatcataaaacactta
gaagggctggtggtacagtatgacctcacagtgcgagacagtgacggaagcgtcattcag
tttctctatggggaagatggcctcgacatcccgaagacacagtttttgcagtctaaacaa
ttcccgtttattgctgataactatgaggtgataaaggagtcaaagaacttaaatgacgtt
ttggcaaggatgaatcctgaacaggtgacaaaacacttccaagtcctcaaaaagtggaaa
gccaagcatcccaccacatcacagagacagggagccttcctgctcttctctcagaaaaaa
aaagcaagagaaaatgcactgagccaaacaggagaccttattaatggcagagaccttgca
accaagcagttgttggaaaggtggtactctgtggatgagaagactgagaacaaatatcga
aggaaaagtgctcgctttccagacccatgcctggctatctaccgtccagatattttcttt
ggttcagtgtcagaaacgtttgaaaacaaggtggacaattacattgaagaatgggaaacc
caggacagccaagagtaccaaagatcggagctgactttagataggttgaagacactgctt
catttaaagtggcagcggtctctttgtgacccaggggaagcggttgggctcttggctgct
cagagtatcggtgaaccctccacacagatgacgctaaacacttttcattttgctggcaga
ggggaaatgaatgtcacattgggtattccaaggctgagggaaatcctcatggtggccagc
gctaatataaaaactcctatgatgagcattccagtgctgaacacaaagaaagcgcacaag
aaggtgaaaaagctaaagaagcagctcactcgagtgtgcttggcagatgtgctgcacaaa
atagacgtgcaggaggctttccgagtggaagggaaattaagtaaacatcatgtataccaa
atcaagtttcatttcttaccatatgaacattatcaacaggaaaaatgtctgaagccagag
catattttacattatatggaaacaaggttctttaagcttttgctggaaaccattaagaag
agaagtaacaagctggcttccttcagagcagttagcgctcggaaggtaactcggaaggat
ctggatgacgacagcggagaactccaagtagacctggaacaggttgatggtgaatctgag
aatgcagaaagtgggaagattgtcgatggagaggcagatgagggagatgccgatgccaca
gaagcaaaaaggaagcaaaagcaggacgaggagattgattatgagaacgaggaagacgag
gatgaagagagtgaggaaagcacagaggagcgtgaggaagaggagccatcctcccttttt
aataaaagctcctcaaatgctgagcaggaaatggagagttctctttcagtcactgaagag
agtcttccacctgctccctcagctgctcgctcagaaagaaggaaaagcggctcccagaca
gcaggagtgagtgagcagaggattaacgctgtgctggacagtcaccaagcggtggaacac
tatgcatatgacacagaggaaggcctgtggtgtgagatcacactgaagctgccactgatg
aaggtgtacttcgatatctcttccctcgtgaccttccttgcacaaaacaccataattcat
gagacaagagggatcacacgctgtctcttaaatgaagcgacaaacaagcacggagaaaag
gagcttgttctgaacacagaaggcataaacctccctgagcttttcaaatatgcagatatt
ctggacctgaggcgactttattcaaatgacattcatgcaatggctcggacttatggcata
gaggcagccctgagagtgatagaaaaggaaatcaaagatgtgtttgctgtgtatggtatt
gaggtggacccccgtcacctgtctctggtggcagattatatgtgctttgaaggtgtttac
aagccattgaaccggatagggatgcaatcaaactcctcccctcttcagcagatgacattt
gaaaccagttacaagtttttgaaggaggcaaccatgatgggtgctcatgatgaactccga
tctccttctgcatgtctggttgttggaaaagttgtcaaaggaggaactggcttgtttgat
ctaaaacaaccactcaagtag
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integrated database retrieval system
