Microcaecilia unicolor: 115461662
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Entry
115461662 CDS
T09142
Symbol
LRBA
Name
(RefSeq) LOW QUALITY PROTEIN: lipopolysaccharide-responsive and beige-like anchor protein
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
muo
Microcaecilia unicolor
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
muo04131
]
115461662 (LRBA)
Membrane trafficking [BR:
muo04131
]
Endosome - Lysosome transport
Others
Others
115461662 (LRBA)
Endosome - Golgi transport
115461662 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
115461662 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Neurobeachin
Laminin_G_3
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_WDHD1_1st
WDR55
WD40_MABP1-WDR62_2nd
SUKH_6
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
115461662
NCBI-ProteinID:
XP_030047517
UniProt:
A0A6P7WWE8
LinkDB
All DBs
Position
2:615722091..616979627
Genome browser
AA seq
2866 aa
AA seq
DB search
MATEDKPVPVQSTGDAVGGENASEGSSLALTPGVPIRGIRMKFAVLTGLLEVGEVSNRDI
VETVFNLLVGGQFDLEMNFIIQEGESIICMVELLDKCDITCQAEIWSIFTAVLKKSIRNL
LICTEVGLIELVLKRIDKADSMIADLLVDMLGVLAGYSLTVRELKLFFSKLQGDKGQWPP
HAVKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRMDPVNNI
NVDKDKPYLYCFRTNKGLGYSAHFVGGCLIVTSIKSKGKGFQHCVKYDFKPQKWYMVSIV
HIYNRWKNSELRCYVNGELASYGDITWFVNTSDTFDKCFLGSSETADANRVFCGQMAAVY
LFSEALNAAQIFAIYQLGPGYKGTFKFKAESDLFLPEHHKLLLYDGKLCSSVAFMYNPRA
TDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSAMHSIGGVQVLFPLFAQLDY
RQYASEEVDTSVCSTLLAFIMELLKNSIAMQEQMLSSKGFLVIGYSLEKSSKAHVTRIVL
ELCLAFAKYLSNLYNGVPLLKQLCDYILLNPAIWIHTPAKVQLILYTYLSTDFIGTVNIY
NAVRRVGTVLLVMHTLKYYYWVVNPQDRSGITPKGLDGPRPTQKEILSLRAFLLMFIKQL
VMKDYGVKEDELQAILNYLLTIHEDDNLMDVLQLLVALMSEHPSSMIPSFDQRNGLRVVY
KLMASRSEGIRVQGLKVLGYFLKHLAPKRKTEIMLGHGLFSLLVERLMLHANSFTMTTYN
VLFEILIEQICTQVVHKQHPDPDSSVKIQNPQMLKVIATLLRTSSPSPETMEVRRVFLSD
MIKLFNSSRENRRSLLQCSVWQEWMLSLCYFNPKNSDEQKITEMVYAIFRILLYHAVKYE
WGGWRVWVDTLSITHSKVTFEMHKESLAQLFREYDGKRDEEIDQGASNPVRTISGVNREM
EVARSSSFLELKIAADTAEISESLDLEQGLQSTETEHVSNDEEQSSCLAHEIKTNEAESS
TSMSGADGIHLEPTTVDEVVDLVKSKTTSRVEAAEIDINQDKEYGDEGTSDADSFVAVQI
SSEDGTPEASEVPEDGTVKVTEDGENVDQKQEIGYLSPPNISESKQEQKTIEGEIQESST
EPDTSATEIPASVDFKEAEELPSLPAIATSEIKELVDDQHFDANGNVKEEEEEVQRKNKE
TSDVSGAIATGSDVDSTTNAIDVPGGSEKRIAKLDVSSIASDTERLELKASTSQAAEQPY
KPLPEAARHQETSGSEAASASNGQRRDSRSTVFHIPEFKWSQMHQRLLTDLLFSIETDIQ
MWRSHSTKTVMDFVNSSDNVIFVHNTVHLLSQVMDSMIMACGGILPLLSAATSATHELEN
IEPTQGLSVEASITFLQRLISLVDVLIFASSLSFSEIEAEKNMSSGGILRQCLRLVCAVA
VRNCLECQHHLQMKSDGESATGQKAAQSLIGTGKSTTKSRIDMVIGVISPVRDFDRLLQD
MDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMYQNTEDILEPQNERRRPQHSRSFRA
TENGSNAASPDVEGISPMAEPSEPVPAEDSESSSSIRRRDSGIGEEPVAVLGSSSDTVAV
AGPDGFSAGPDAVSEVLCALSSEVKMPSETISNSEIEQENKTTTSSLPSAKNVNVKDILR
SLVNTPADGVAVEPTLLPPTFLGALSDPAVEQPVHFRSFDRSVIVAPKKSTVASSPAAVN
VATNAVSVVSSLDSTQAPNLDRDSPGSESSNAKLPAVPTVSSVPEDSASNMSITERLEHA
LEKVAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLLCSQEWQ
NSIQKNAGLAFIELVNEGRLLSQTMKDHLVRVANEAEFILSRQRAEDIHRHADFESLCAQ
YSADKREEEKMCDHLIRAAKYRDHVTATQLVQKIINILTDKHGAWGSSALSRPREFWRLD
YWEDDLRRRRRFVRNPLGSTHPEATLKAAMEHGQCENSILPIAAAPDEDVLLKGKQSIKS
QVLGSQNSETEILVEGDDETLSSVEEKDLENLTGPVSLCTVAQLVVPSVVVKGTLSITSS
ELYFEVDEEDPSFKKIDPKILAYTEGLHGKWLFTEIRAIFSRRYLLQNTALEIFMANRVA
VMFNFPDQSMVKKVVHCLPRVGIGTNFGLPQTRRISLASPRQIFKASNMTQRWQHREISN
FEYLIFLNTVAGRSYNDLNQYPVFPWVITNYESEELDLTLPSNFRDLSKPVGALNPKRAA
FFSERHETWDDDQVPKFHYGTHYSTASFVLAWLLRIEPFTTFFLNLQGGKFDHADRTFSS
ISRAWRNCQRDTSDIKELIPEFYYLPEMFVNFNNYSLGVMDDGAIVSDVELPPWAKSPEE
FVRINRLALESEFVSCQLHQWIDLIFGYKQQGPEAVRALNVFYYLTYEGAVNLSSIADPV
LREAVEAQIRSFGQTPSQLLIEPHPPRSSAMQVYLLLQTPLMFTDQAQQDVIMVLKFPSN
SPVTHVAANTQPGLANPAVITVTANRLFAVNKWHNLPAHQGAMQDQPYQLPVEIDPLIAS
STGMHRRQITDLLDQSIQVHSQCFVITADNRFILVCGFWDKSFRVYSTDSGKLVQVIFGH
WDVVTCLARSESYIGGDCYVLSGSRDATLLLWYWNGKNNCIGDNPGSEFTTPRAILTGHD
CEITCATVCAELGLVISGSKEGPCLIHSMNGDLLRTLEGPNSCWRPKLIQASREGHCVVY
YEKGLFCVFSVNGKLQATMETEDNTRAIQLSRDGQYLLTGGDSGVIMVWQVCDLKHLFAY
PGCDAGIRSMAMSYDQRCIMTGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
8601 nt
NT seq
+upstream
nt +downstream
nt
atggctactgaagacaaaccagttcctgtgcagtcaacaggtgatgcagtagggggagag
aatgcaagcgaaggtagttccctggccctgactccgggggttcctattcgaggtatcagg
atgaaattcgcggttctaacgggactcctggaagttggagaggtgtctaacagagatatt
gtggaaacggtgtttaatctgcttgtaggtggccaatttgatttggaaatgaacttcatc
atccaagaaggagaaagtatcatatgtatggtggaactgttggacaagtgtgatatcact
tgtcaggcagaaatttggagtatcttcactgctgtcttgaagaagagtattcgcaatcta
ctcatctgcactgaagtgggactcattgagttagtgctcaaaaggatcgataaagccgac
agcatgatagcagatctcttggttgacatgttgggagtgctcgctggctacagtttgaca
gttcgagagttgaagctgttctttagcaagcttcaaggagataaagggcaatggcctcca
catgcggtaaaattattgtccgttctaaagcacatgcctcagaaatatgggccggacgct
ttcttcaactttccaggaaagagtgctgcagctattgctttacctccaatagctaagtgg
ccatatcagaatggctttacgtttcacacctggttacgaatggacccagtgaacaacatc
aatgtggataaggataagccttacttgtactgtttccgaacaaacaaaggtcttggctat
tctgctcactttgttggaggctgcctgattgtaacatcaataaagtcaaagggaaaaggc
tttcaacactgtgtaaagtatgatttcaagccacagaagtggtatatggtatcaatagtg
cacatttataatcgttggaagaacagtgagcttcggtgttacgtcaatggtgaattggca
tcatatggtgacataacttggtttgtcaacacaagtgacacgtttgacaaatgctttttg
ggctcatctgagacagcagatgctaatcgagtattttgtggtcaaatggcagctgtgtat
ctgttcagtgaagctctgaatgctgctcagatttttgctatctaccaattgggtcctggg
tacaagggcacatttaaatttaaggcagaaagtgacctctttcttcctgagcatcacaaa
ctattgttgtatgatggcaaactttgcagttctgttgcattcatgtacaacccaagggct
acagatgcacaactctgcctggaatcatcccctaaggataacccatctatctttgttcac
tcaccacatgcccttatgctgcaggatgtgaaggcagttctaacacattctatccaaagt
gctatgcattccattggaggtgtgcaggtactgtttcctttgtttgctcagttggattac
aggcagtatgcatctgaagaagttgatacctctgtttgttccactcttctggcctttata
atggagttgttgaagaactctattgctatgcaagagcagatgctttcttcaaagggcttc
cttgtgataggatacagtcttgagaagtcttccaaagctcatgttactagaatcgtgctg
gaactttgcttggcttttgctaagtacctgagtaatttgtacaatggagtaccgttgctc
aagcaactgtgtgactacattcttctgaacccggcaatatggattcacactccagccaag
gttcagttaatcctgtacacttacttgtctactgacttcattggtactgtaaacatttat
aatgctgttcgccgagttgggacagtgctactggtgatgcacaccttgaagtactactat
tgggttgtgaatccccaggatcgcagtggtattactccaaaaggtctagatgggccacga
cctactcagaaagaaattctttctctgcgtgcattccttctgatgttcattaaacagctg
gtgatgaaggattatggtgtgaaagaagatgagctacaggctattctgaattatctactc
actattcatgaggatgacaatttgatggacgtcttgcagttactcgtagctctaatgtcc
gagcacccaagttcaatgatcccttcctttgatcagaggaatggactgagagtggtttat
aaactaatggcatccagaagtgaagggatacgagtacaaggcctgaaagtcttgggatac
ttcctgaaacatcttgcacccaagagaaaaacagagatcatgctgggacacggattgttc
tctctacttgtggaaaggctgatgcttcacgcaaactcattcaccatgaccacatacaat
gtcctatttgagatcttaatcgaacagatttgcacacaggtagtgcataagcagcaccct
gatccagactcctctgtgaaaattcaaaatcctcagatgctgaaagtgattgcaactctt
ctgcgcacctcctctccttctccagaaactatggaagttcgacgtgtattcctctctgac
atgataaaactttttaacagcagcagagaaaaccggaggagtttgctgcaatgctctgtg
tggcaagagtggatgctgtccctttgttatttcaaccccaagaactcagatgagcagaag
ataacagaaatggtgtatgccatttttcggattttgctttaccatgctgtcaagtacgaa
tggggtggctggcgtgtatgggtggacaccctatcgatcacacattcaaaggtcacattt
gaaatgcacaaagaaagcctggcccagttgttcagagaatatgatggaaaaagagatgaa
gaaattgatcagggcgcttcaaatccagttagaaccatctcaggtgttaacagagagatg
gaagttgcaagaagttcttctttcttggagctgaaaatagcagctgatacagcagaaatt
tctgagagtttagatctggaacagggcctgcaaagtaccgagactgagcatgtttctaat
gatgaagagcagagcagttgcttagctcatgaaataaagacgaatgaagcagaaagcagc
accagtatgtctggtgctgatggtattcacttagaaccaactactgtagatgaagtggtg
gacttggttaagagcaaaactacttcaagggtagaagcagctgaaatagatataaaccag
gataaggaatatggagatgaaggtacttctgatgctgactcatttgtagctgtacaaatt
agctcagaagatggtacacctgaggcttcagaagtacccgaagacggaacagtaaaggta
acagaagatggggagaatgttgatcaaaagcaggagatcggctacctatcaccccccaat
atttcagaatcaaaacaagagcaaaagacaattgaaggtgaaattcaggaaagctcaaca
gaacctgacacatctgctacagaaattccagcatctgtggattttaaagaggcagaggaa
ttgccttcattaccagcaatagcgacttcagaaatcaaggaactagtggatgaccaacat
tttgatgcaaatgggaacgtaaaggaagaggaggaggaggttcaaaggaaaaacaaggag
accagtgatgtcagtggagccatagcaactggtagtgatgtggattcaaccacaaatgct
atagatgttcctgggggctcagagaagagaattgccaaactagatgtttcaagcattgca
tctgatactgagaggcttgagctgaaagctagcacaagtcaagctgctgagcaaccttat
aaacctttaccggaggcagcaagacatcaggagacttcggggtcagaggcagcatctgct
tctaatggccagaggagagattccagatctactgtgtttcacatccctgaatttaaatgg
tcacaaatgcaccagcgactgctcacagatctcttattttctatagaaactgatatacag
atgtggagaagccattctacaaagacagtgatggactttgtgaacagcagtgacaatgtc
atctttgtgcacaatacagttcacctcctctcgcaagttatggatagcatgattatggct
tgtggtgggatactgcctctgctttctgcagctacatctgctacgcatgaattggaaaac
attgaaccaacacaaggattgtctgttgaagcttctataacatttcttcagagattgatc
agccttgtggatgtattaatttttgcaagctctctcagtttcagtgagattgaggctgag
aagaacatgtcatcgggaggaattttacgccagtgtcttcggttagtctgtgcggtggca
gtaagaaattgcttggaatgtcagcatcatttgcagatgaaatcggatggggaaagtgca
acaggccagaaagcagcacagagcctgattgggacagggaaatctacaacaaagagtcgg
attgacatggtgataggtgtcatttctccagttcgagactttgacaggcttttgcaggac
atggatataaacagactcagagctgtagtcttcagagatatagaggacagtaaacaggct
cagttcctagcactggctgtggtatacttcatttctgtccttatgtatcaaaatacagag
gacattctggagccccagaatgagagaagacgacctcagcacagccgctcattcagggct
acagaaaatggaagtaatgcagcatctccagatgtagaaggtatatcacccatggctgaa
ccctcagagcctgttcctgctgaagattctgaaagtagctcgtctatacgaagaagagac
tctggaattggggaggaaccagtggcagtcctaggaagcagttctgacacagtggctgtt
gcaggccctgatggtttcagtgcaggtccagatgctgtcagtgaagtgctatgtgcactg
tcctcagaggtcaaaatgccttctgaaaccataagcaacagtgaaattgagcaggaaaac
aagaccacaacatcctctctaccatctgcaaaaaacgtcaatgtgaaagatatcctcagg
agcttggtgaacactccagcagatggtgttgctgtagaacctacccttttgccgcctacc
ttccttggagccttgagtgaccctgcagtagagcagcctgtgcacttccgttcctttgac
aggagtgtcattgtggccccaaagaaatctacggttgcctcttctccagcagctgtgaac
gtggctaccaatgctgtcagtgtggtttcttctttagattcgactcaagctcccaatttg
gacagggactctccaggcagtgaatcatcaaatgctaaattaccggctgtccctacagtt
tcttcagtacctgaggactcagcttcaaacatgagcattacagaaaggcttgaacatgct
ttagaaaaggttgctcctctgttgagagaaatttttgtggattttgctcctttcctttct
cgaactctgttgggcagccatgggcaagaattgctgatagaaggtacaagcctggtgtgt
atgaaatcaagcagctcagttgtagagttggtcatgcttctctgttctcaggaatggcag
aactcaattcagaagaatgcaggtcttgctttcattgaacttgtcaacgaaggaagattg
ctgagccaaaccatgaaagaccacctagtgagagttgccaatgaagcagaatttatcctc
agcagacagagagcagaggacattcataggcatgctgattttgagtcactatgtgcccag
tattctgcagacaaacgagaagaagaaaagatgtgtgatcacctgattcgagcagccaag
tatcgagaccatgtgactgcaacccagctggtacaaaaaattatcaacattctgactgac
aagcatggagcctgggggagttcagccctgagtcgtcctcgtgagttctggcgcctcgac
tactgggaagatgacttgcggcgccggcgacgatttgtacgtaaccccctaggatcgaca
catcctgaagcgacactaaaagcagccatggaacacggtcagtgtgagaacagcatcttg
ccaatagcagcagctccagatgaagacgtccttcttaaaggaaaacagtccatcaagagt
caggtgttgggaagccagaactcagaaactgagatattagtggaaggagatgatgagact
ttgtcatccgtggaggagaaagacttagagaacttaactggaccggttagcctgtgcact
gtggcccagcttgtggtcccttctgtagttgtaaagggtactctttccatcacctcctct
gaactgtactttgaggttgatgaagaagatcccagctttaagaaaattgatcccaagatt
ttggcttacacagaagggctacatggaaaatggttgttcactgagattcgagccatcttc
tctaggcgctacctccttcagaatacagcactagaaatatttatggcaaacagagttgcc
gtcatgttcaactttccagaccagtccatggtaaagaaagtagtacactgtctaccacga
gttggcattggcactaattttggattgccacaaacaaggcgtatctctttggctagtccc
cgccagattttcaaagcatcaaacatgactcaacggtggcagcacagagaaatttcaaac
tttgaatatctgatttttctcaacacagttgcaggacgttcctacaatgacttaaatcag
tacccagtatttccttgggttatcaccaattatgaatctgaagagctagaccttacactt
cccagcaacttcagagatttgtccaagcctgttggagcactgaatccaaaaagagcagcc
ttcttttcagaacgccatgaaacatgggatgatgatcaagttccaaagtttcactacggc
acacattattcaactgcaagttttgtattggcatggctactaagaattgagccctttaca
acatttttcttaaatttacaaggtggtaaatttgaccatgcagatagaactttttcatca
atctccagagcatggcgcaactgtcagcgggacacctcagatatcaaggagctgatccct
gaattttattatctccctgaaatgtttgtgaacttcaataattacagtctaggagtgatg
gatgatggagcaatagtgtctgatgttgaacttccaccatgggccaaatccccagaagaa
tttgttcgcattaatagactggccttggagagtgagtttgtgtcatgccagcttcaccaa
tggattgatcttatttttggatataaacagcaaggaccagaggcagtccgtgcccttaat
gtattctattacctgacatatgaaggggcagtcaatctgagctctatagcagatcctgta
ctgagagaggctgtagaagctcaaatccgaagttttgggcagaccccatctcaactactc
atagagccccatcctccacgaagttctgctatgcaggtgtatctcctcctgcagactcca
ctgatgttcacagaccaagctcagcaggatgtcatcatggtcctgaagttcccctctaac
tctcctgtcactcatgtggcagccaacactcagcctggtctggcaaatcctgctgtaatt
actgtcaccgctaacaggctgtttgctgtcaacaagtggcataatcttcctgcccatcaa
ggtgcaatgcaggaccaaccgtaccagctgccagtggaaatcgatcctctcatagccagc
agtacaggtatgcacaggaggcaaatcactgacctattagaccaaagcattcaggtccat
tcacaatgttttgtgatcactgccgacaatcgcttcatcctggtttgtggcttttgggat
aaaagcttccgggtctattctaccgactcaggtaaattagtccaggtaatatttgggcac
tgggatgttgttacatgtctggctcgttctgaatcgtacattggtggagattgctacgtt
ctgtcaggatcacgtgatgctacactgctgctctggtactggaatggaaaaaacaattgt
atcggagacaacccaggcagtgaatttaccactcccagggccattctaacaggccatgac
tgtgagatcacctgtgctacagtttgtgctgaacttggattggtaataagtggttctaaa
gaaggaccatgtctgatacattctatgaatggagaccttttgaggactttggagggtccc
aacagctgctggagaccaaaactcatccaggcctcaagagagggccactgtgtggtatac
tatgagaaaggccttttctgtgtattcagtgtgaatggaaaacttcaggccaccatggaa
actgaagacaatacaagggcaattcagcttagtcgagatggacaatatctgcttactggt
ggggacagcggagtcataatggtctggcaggtgtgtgatctcaagcacctctttgcatat
ccaggctgtgatgcagggatccggtccatggccatgtcatatgatcagaggtgtataatg
actggaatggcttccggaagcatagtgctattctataatgacttcaaccggtggcatcac
gaataccagaccagatactga
DBGET
integrated database retrieval system
