Microcaecilia unicolor: 115461901
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Entry
115461901 CDS
T09142
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
muo
Microcaecilia unicolor
Pathway
muo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115461901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
muo03019
]
115461901
Enzymes [BR:
muo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
115461901
Messenger RNA biogenesis [BR:
muo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
115461901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_bind
CAF1
RRM_Thc1
RRM_1
Motif
Other DBs
NCBI-GeneID:
115461901
NCBI-ProteinID:
XP_030047817
UniProt:
A0A6P7WX82
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Position
2:complement(180408909..180446780)
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AA seq
402 aa
AA seq
DB search
MAGTPIGPAKEHPWAQKHPCHPGLPKMARSGHNKVWGSPEHRTAKIRTQLPTHVVLILAP
LVNTAIEEYDIVRFNYYCLLPSHQPFRKTQSQKFSSKCVIKVGVFGSSESYKIHQDKQTV
YHSTRCCIERILLYRQSSPSSDINEFKEVTSSCVLPRLLDTKLMASTQPFKEIINNTSLA
ELESRLKETPFKPPTVESAEGFPSYDTASEQLHEAGYDAYITGLCFISMANFLGSFLNPP
KLNVSARSKLIEPFYNKLFLIRVMDIPYLNLQGPDFQPKQDHVLHVTFPREWKTSDLYQL
FSAFGNIQVSWIDDPSVFVSLSQPEQVQIAVNTSKYSESYWIQTYAEYVEKKYEQKQPKR
KWSENSWKEIERESISASGISLRLASLGKPTTELPQTTYSPS
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggccggaacacccattgggccagcaaaagagcatccctgggcacagaagcacccctgt
cacccaggactacccaaaatggcccgaagtggccacaacaaagtctggggaagcccagag
cacaggacagcaaaaattcggacacagttaccaactcacgtggtcttaatccttgcccca
ttggttaatacagctattgaagaatatgatattgttaggtttaactattattgtctcctc
ccttcacatcaacctttcaggaaaactcagtctcaaaaattcagttcaaaatgtgttatt
aaagtaggagtttttggatcatctgagtcctacaagatacatcaggataaacaaacagta
tatcatagtacacgttgctgcattgaaagaatcctgttgtaccgacaatcatcgccctcg
tcggacatcaatgagtttaaagaagtaacatcgtcgtgcgtgcttcccagattgctggat
accaaactgatggcaagcacacagccttttaaggaaatcattaacaacacatcccttgca
gaactggagtcgcgtttaaaagaaacaccattcaaacctcctacagttgaaagtgcagaa
gggtttccaagttacgacacggcttctgaacagcttcatgaagcgggctacgatgcatac
atcacaggactctgcttcatctccatggcaaacttcctaggttccttcctcaaccctccc
aagctcaatgtctctgctcgatcaaaactcattgaacctttttataacaagttatttctt
ataagggttatggacataccatatctcaatctacaagggccagacttccaaccaaaacaa
gatcatgtccttcatgttacctttccaagagagtggaagacaagtgatctgtatcagctt
ttcagtgcatttggtaacattcaagtatcctggattgatgatccatcagtgtttgtgtca
cttagccagcctgaacaagttcaaatagccgtcaacaccagcaagtattcggaaagctat
tggattcaaacctacgcggagtatgtggagaagaagtatgaacagaaacagccaaagaga
aaatggtctgagaacagctggaaagaaatagagagggagagcatctcagcatctggaatt
tccctcagactggcctctctcggaaagccaactacagaactgccacaaactacctacagt
ccatcctga
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