Microcaecilia unicolor: 115463566
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Entry
115463566 CDS
T09142
Symbol
FOCAD
Name
(RefSeq) LOW QUALITY PROTEIN: focadhesin
KO
K27498
focadhesin
Organism
muo
Microcaecilia unicolor
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
muo03019
]
115463566 (FOCAD)
Messenger RNA biogenesis [BR:
muo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
115463566 (FOCAD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Focadhesin
DUF3730
HEAT
Motif
Other DBs
NCBI-GeneID:
115463566
NCBI-ProteinID:
XP_030050071
UniProt:
A0A6P7X9T6
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Position
2:281343877..281782295
Genome browser
AA seq
1806 aa
AA seq
DB search
MTEELGKRFEFPNSLIQSQAVSHLIALVLKENITSEKISQSSNQTPALNVLWEKCCSDHV
VVRTSCCEALVALVAQDHADFSYVLNGLLNLIPSARNIQGLVKSIGKLLQMQVLRTEKHA
AGLSLSSYAVRNPPHPFITVLENRSDCWPVILQQLSIFLHQCPEWAQSSGVSMMAPFLRY
LYCEPAQTRQHSELRISLLKVFLKPHSPQDSERPSELEQCLLRLFCSLTPYLQLNDLMQV
AEVTMFLEELSVALQRYPAFWNSELCQLSLQLLCISEVSLRVTGDCSSLIHVIERNASLL
KEDFPTDQVLIGVGVLLLQTPASQQKPILALAQKILLSSESCEMPALSPILVMPLLQILS
STASCDSQEDATSRHQLAITLLEMVQNECNLGKREQRSWKLTFPITSWYSSLYTTWRMTE
AMKKDSTAVRDWLTSIKSLLPVMSEVPIHISLLLAYFLVHLEGEILRDVLSVVTQVAETD
SSQVPNLVPVLMFKLGRPLEPMLYRDILYTLPTLGTHKVCVAQILRAIQILGSTPKLRAI
ALRLMTSLWEKQDRVYSELQKFMAISDMSSKLVGKEVLWEKTIAKAASIRDICRQRPYQH
GADMLAAISQVLNECSKPDQATPAALVLQGLHALCQAEVVDIQSTWNAFSSKLSCDTRPL
ILKTLHELFALVPSLIVKTEEYEKFKANVVSFLWNHTQNKDQLVATTAYQALCKFNSEEH
TILHLPEQARPEVPPPEEDDMAEDEEEKEKEVDLSVPGSSYMKLMMLTAPAVLPAFKEFA
ASLVLQEMAVMPRGVYHSALRGGATRSDQGKTVAGVPNFMLKMYERNKQPGLKPGLAAGM
LMCYDLPIQTDRDGRPINRFLASRGRSYQQMLTALIHEVSIQPSDWHRSIVLPQSWLAFM
NRTYHAVLQGRQAELEMQLKHGKEDPSEVQYKKFTAWLWVRDVLTDVIKSASKDSPVVQG
NSLLALTGLAVAVAKYENSLPSEVEGTPEIEPDILPTNFWLSMVLDTLLSIVDSHYQAKG
RVFPWFQHKSYSGENTASAIARSCAATALSLMVPVFIVSRKEMVEEVLNILTARLPGKPS
ADESQAVQIHMGLALGMFISRLCEEKISDVSGQQLSLLLMKSLDALEDCCFDTSLEYNTG
CILGVGMVLCLMSQSGHTESRVHVSATVRKLCKYLDESMDQTRTFQEVLSYCVACVSISA
FSAGIIEAEEAEEIMCKLRTLTEHNQQTPGLALALGNIVHGLSVSGHGKAEDLNNRLLPA
WIKILLAQGCPTMQRLAAVNGLIALVGSEGALIQLKSEAIQSSQFQSKLNEVIRTVTEVV
SFSGVIGLQTNAAWLLGHRHLACSSSNQSRTFWXVCFCIPPDFGYLSEKSLIRAIIDFII
DAGKKGPESVLPHLVKVSLEPIAAAGNNYQYPPINWASILSPLMRLKFGEEVQQLCIELA
VTQAQSSQNAAVFLGMWVAPPLVYSLSMRTRKHLFISLPLWMKYVSEDKLQTFAEVFMVQ
HFEAKNRLKNQELCLSVLEGVNQGLKLPSPPQYCWSALCKIAEKIYELLPNKIQIFEVEL
YISIAKCFSEMADTEIDRICHVSKENIEKATFMRVYLVSQGRVPLLCLNDVISVGADCNQ
KDTVVWMMMQGLYQARLVSHENTGVLKRMEWLLELMGHIRNVAYKSIMIQSMDLKKTVDF
LLWIFTASVVTWADHAGPLLLGVRTNWLPKQHEELPVAAVFGGSGINVLSVQEGRTALPG
SLQLLLSKEPWKEQAQKFIDWLFNILESPEDALSETSRDLVKATLLALRFRPEFKKKSVW
ARAYGF
NT seq
5421 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagaacttgggaaacgatttgaatttccaaactctttgattcaatcacaggct
gtgagccaccttattgctttagtgctaaaagaaaatattacttcagagaaaatcagtcag
tcatctaaccagacacctgcgttgaacgtactgtgggagaaatgctgtagtgaccatgtg
gttgtgaggacctcctgctgtgaggccctggtagcacttgttgcccaggatcatgcagac
ttcagttatgtgcttaatggacttctcaacctgattccatctgccaggaatatacaagga
ttagtgaaaagtatcgggaagcttttgcagatgcaagtccttcgaactgagaaacacgca
gctggtttgtccttgagctcatatgcagtcaggaatcctccacatccatttatcactgtc
ctggaaaacagatctgactgttggccagttattctgcagcagctgtccatctttttgcac
caatgtcctgaatgggcacagagttccggtgtgtctatgatggcaccatttctcaggtat
ctgtactgtgagcctgctcagacacggcagcattctgagctacgaataagcctgttaaag
gtcttccttaagccgcacagccctcaggacagtgagagaccttctgaattagaacaatgt
cttcttcgactgttctgtagcctgacaccctacctgcagctaaatgatttgatgcaagtt
gcagaagtaaccatgtttcttgaggagttgtcggtggctcttcagcgctacccagccttc
tggaatagtgagctatgccagctgtctttgcagcttctgtgcatcagtgaagtcagcctg
agggtaactggagattgttcatccttgattcatgtgatagagagaaatgccagcctattg
aaagaggactttccaactgaccaggttttaattggagtaggcgtacttttgctgcagacg
ccagcaagtcagcagaagccaatcctggccctagcccagaaaatcctcttgagttccgaa
tcctgtgagatgcctgccctgtctcctatcctggtgatgccactcttgcagatattgtct
tccacagcatcatgtgactcccaagaggatgccacctccaggcatcagttggctataact
cttttggaaatggtacaaaatgaatgtaatttgggaaaacgagaacagcgttcttggaag
ctcaccttccctataaccagttggtatagctcattgtatacaacctggaggatgacagag
gctatgaaaaaagacagcacagcagtgcgtgattggttaacttccattaagtcattgttg
cctgtgatgtctgaagttcctatacatatttctcttctgttggcatacttcctagttcac
ttagaaggggagattcttcgtgacgtattgagtgttgttacgcaagttgcagaaactgat
tcatcacaggtaccaaatcttgtcccagttttgatgttcaaattagggcgtccactggaa
cccatgttataccgtgacattctatatactttgcctactctgggtacacacaaggtttgt
gtagcccagattttgcgtgcaatacagatactgggaagcactccaaaactcagagcaatc
gctttacgcctgatgacttcattgtgggagaaacaggatcgagtgtactcagagctgcag
aagttcatggcaatctctgatatgtcctctaagcttgttggaaaggaagtcctgtgggaa
aaaacaatagcaaaagctgcctctattagagatatctgcaggcaaagaccctatcagcat
ggagcagatatgctggctgcaatttctcaggtgttgaatgaatgctcaaaacccgatcaa
gctacacctgcagccttagtattacaaggtcttcatgcactctgccaagctgaggttgtt
gacattcagtccacctggaatgcattctcctcaaagctaagctgtgacacacgaccctta
attttgaaaacactgcatgaactctttgccctggtgccttcactgatagtgaaaactgaa
gaatatgagaaatttaaagccaacgtggtcagcttcctctggaatcacactcagaacaag
gatcagcttgtagcaaccacagcatatcaagctctttgtaaatttaactctgaagaacat
acaattcttcatcttcctgaacaggcaagacccgaagtgcctccaccagaagaggatgac
atggcagaggacgaggaagagaaagagaaagaagtagatctttctgtaccaggttcctca
tatatgaaactcatgatgctcacagcccctgctgtcttacctgcattcaaagagtttgcg
gcctcacttgtactgcaggagatggctgtcatgccccgtggagtgtatcattctgcactg
agaggaggcgccacgcgttcagatcaagggaagactgtagccggagttccaaactttatg
ctgaagatgtatgagaggaacaagcagccaggcttgaagcctgggctggcagctggtatg
ctgatgtgctacgacctgccaatccagacagacagagatggcagaccaataaatcgcttt
cttgctagtaggggacgtagctatcaacagatgctgacagcactcatacatgaggtcagc
atccagccttcagattggcatcgctctattgtgctccctcagtcttggctggcattcatg
aacaggacataccatgctgttttgcaggggagacaggcagagctggagatgcagctgaag
catgggaaagaggatcctagtgaagtgcagtacaagaaatttacagcctggctctgggtc
agagatgtgttgactgacgtcataaagtctgcttcaaaggacagtcctgtggtacaagga
aattctttactggctctgactggacttgcagtagcagtggcaaagtatgaaaacagcctt
ccctcagaggtagaaggaacaccagagattgaacctgatatcctcccaacaaacttttgg
ctctctatggtactggacaccctgctgagtattgtggacagccactatcaagcaaaagga
cgagtcttcccatggttccagcataagtcatactctggagagaatacagccagtgccatt
gcccgatcttgtgccgccactgctttatctctcatggtaccagtgtttattgtctcccgc
aaggagatggtagaggaagtcctgaatatactgactgccaggttgcctgggaaaccaagt
gctgatgagtctcaagctgttcagatccacatgggtcttgctttggggatgtttatttct
cgactctgtgaagaaaaaataagtgacgtatctggccagcaactaagtttgttgttaatg
aaatccttggatgcactagaggattgctgcttcgacaccagtctagaatacaatactggc
tgtattttaggagttgggatggttctttgtctcatgagtcagagtggccacaccgaatct
cgagtccatgtttctgcaactgttcgcaaactttgtaaatacctagatgaaagtatggat
caaaccagaaccttccaagaagttctttcctactgtgttgcttgtgtcagcatctctgct
ttcagtgctggaataattgaagctgaagaagccgaagagatcatgtgcaagctgagaacc
ttaacagaacataatcaacagacacctggtttggctctggcattggggaacatagttcat
ggcctctcagtctcaggacatgggaaagccgaggacctgaacaaccgactgcttccagcc
tggatcaagattttgcttgcacagggatgccctacaatgcagcgtctggcagcagtcaac
ggtctcattgcactagtagggtctgaaggagcactgatacagctaaaatctgaagctatc
cagtcttcacagttccagagtaaactgaatgaagtcatcaggacagtaactgaagttgtc
agtttttctggcgtaattggccttcagacaaatgcagcctggcttttaggtcaccgtcat
ctggcatgctcatcttcaaaccaaagcagaacattctggtaagtttgcttctgtattcct
ccagactttggttacttgtcagaaaagagcctaattcgtgctattattgatttcattatc
gatgcaggaaagaaaggtcctgaatcagttcttcctcatttggtcaaggtgtcattggag
cctattgctgcagctggaaataactaccagtatcctcccataaactgggcttccattctg
tctcctctgatgagactgaaatttggagaagaggtccagcagctctgcattgaactagca
gtaacacaagcccagtcatcccaaaatgctgcagtgttcctggggatgtgggttgcacca
cctctggtctacagtctcagcatgagaaccagaaaacacctattcatttcattgccacta
tggatgaaatatgtctcagaagacaagctacagacttttgcagaagtttttatggtgcag
cactttgaagccaagaacagactgaagaaccaagagctgtgcctgagtgtcttggaagga
gtgaaccaaggcctgaagcttcccagtcctccccagtactgctggagtgccttatgtaag
atagcagagaaaatatatgagcttttaccaaataagattcagatttttgaggtggagctt
tatattagcattgcaaaatgcttctcagaaatggcagatacagaaattgatcgaatatgt
catgtctcaaaggaaaatattgagaaggccaccttcatgagagtgtatttggtctctcaa
ggccgcgttcccttgctatgtttaaacgatgtcattagtgttggtgctgattgtaaccag
aaagacactgttgtttggatgatgatgcaaggtttatatcaagcacggctcgtaagtcat
gaaaatacaggagtactgaagagaatggagtggctgttggaattgatgggtcatataaga
aatgtggcttacaaatccataatgatacaaagcatggatctgaagaagactgtagacttc
ctgctgtggatatttacagcttctgtggtcacatgggctgaccatgctggacctctcttg
cttggagtcaggaccaattggttaccgaagcaacatgaagagctgccagtagcagctgtg
tttggtggaagtgggattaatgtgctgtcagtacaagagggcagaactgctcttcctggt
agcttgcagctcttgctgtctaaagagccttggaaggagcaagcgcaaaagtttattgat
tggctatttaatattctggaaagccctgaagatgcactatcagaaacctccagagatctt
gtaaaagctacacttctggctttgagattccgtcctgaattcaaaaagaaatcagtgtgg
gcaagggcctatggattctag
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integrated database retrieval system