Microcaecilia unicolor: 115463726
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Entry
115463726 CDS
T09142
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
muo
Microcaecilia unicolor
Pathway
muo03013
Nucleocytoplasmic transport
muo03015
mRNA surveillance pathway
muo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115463726 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
115463726 (NCBP1)
03015 mRNA surveillance pathway
115463726 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
muo03019
]
115463726 (NCBP1)
03041 Spliceosome [BR:
muo03041
]
115463726 (NCBP1)
Messenger RNA biogenesis [BR:
muo03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
115463726 (NCBP1)
Spliceosome [BR:
muo03041
]
Common components
Common spliceosomal components
Cap binding complex
115463726 (NCBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
DUF1690
Vfa1
DASH_Spc19
KASH_CCD
AAA_11
Motif
Other DBs
NCBI-GeneID:
115463726
NCBI-ProteinID:
XP_030050317
UniProt:
A0A6P7X3Y9
LinkDB
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Position
2:349934890..350228591
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AA seq
793 aa
AA seq
DB search
MSRRRHSDENDGGQPHKRRRTSEPIEIEDRLESLICRVGEKSTSSLESNLEGLAGVLEAD
LPNYKSKILRILCTVSARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMVRQLKESLKSN
QYSEAVYLIRFLSDLVNCHVIAAPSMVAMFENFVNVTQEEDVPQVRCDWYVFAVLSSLPW
VGKELYEKKDVEMDRILSQIENFLKRRQKIHVSMLQVWTADKPHPQEEYLDCLWAQIQKM
KKDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTQDSMYPMPRVIFRLFDYTDAPE
GPVMPGSHSVERFVIEENLHCIIKSHWKERKSCAAQLLSYPGKSKIPLNYHIVEVIFAEL
FQLPVPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMFYMRLDSMNTTCIDRLINWFSH
HLSNFQFRWSWEDWSDCLTQDLDKPKPKFVKEVLEKCMRLSYHQRILDIVPAAFSALTPP
TPACIYKYGDESNSSLPGYPVATSLTNAIKTKATNEEIFTILKDVPNPNQDDEDDERFSF
NPLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMYDVWKNHPQ
MISVLIDKMIRTQIVDCAAVANWIFSPELSHDFTRLYIWEILHSTIRKMNKHVQKIQREL
EETKGKLEKQHKRRDSDDDDDRNSDREDGPLEEQIERLQEKVESAQSEQKNLFLVIFQRF
IMLLTEHLVRCETGGIDVITPWYKNCTERLQQIFLQHHQIIHQYMVTLENLLFTAELDHH
ILAVFQQFCALQT
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggaggaggcatagtgacgagaacgatggaggacaacctcataaaaggaggaga
acttcagaaccgattgaaattgaagacagactagaatctttaatatgcagagtgggagaa
aagagtacgtcctcattggagagcaatttggaaggacttgctggagttttggaggctgat
ctaccaaattacaagagcaagatcttaagaattctttgtacagtgagtgcacgccttctg
cctgagaaactgaccgtttatacaacattggttggattactgaatgctaggaattacaac
tttggtggagagtttgttgaagctatggttcgtcaactcaaagagtctttgaaatccaac
cagtattctgaagctgtttatttaatccgttttctgtctgaccttgtgaattgccatgtg
atagctgcaccttcaatggtagccatgtttgaaaattttgtaaatgtgactcaagaggaa
gatgtaccacaggtccgttgtgactggtatgtgtttgctgttctttcgtctttgccatgg
gtgggaaaggagctgtacgaaaagaaagatgttgagatggatcgcattttatcacaaatt
gaaaactttctgaagagacgccagaagattcatgtatctatgttacaagtttggactgct
gataaaccacatcctcaagaagagtatttagactgcctttgggctcagattcagaagatg
aaaaaggatcgctggcaggaaagacacatcttacgtccatatcttgcgtttgacagcatc
ctttgtgaagccctacaacacaatctgcctccttttacgccgccaccacacacacaggat
tccatgtatcccatgccaagggttatcttcaggctttttgactacacagatgctccagag
ggccctgttatgccaggcagtcattctgttgagagatttgtgatagaagaaaatttgcat
tgcatcatcaagtcacattggaaagaacgaaaaagctgtgctgcacaactattgagttat
ccagggaagagcaagattcctttgaactaccacatagttgaagtaatctttgcagagcta
tttcagcttcccgtgcctccacatattgatgtcatgtatacaacgcttctaattgagctc
tgtaaacttcagcctggatctctaccacaagttcttgcacaggctactgaaatgttctat
atgcgtttggattcaatgaatacaacctgcatagacaggttaattaactggttctcccac
cacttgagtaactttcaattccgctggagctgggaagattggtcagattgtcttacccag
gaccttgataagcccaaaccaaaatttgtaaaagaagttttagaaaagtgcatgagactc
tcttaccatcagaggatactggatattgtccctgctgccttttctgcattgacaccgcca
accccagcgtgcatttataaatatggagatgaaagcaatagctctcttccgggttatccg
gttgctaccagtttgactaatgccatcaaaaccaaggcaacaaatgaagaaattttcacc
attttaaaagatgttcccaatcctaaccaggatgatgaggatgatgaaaggttcagtttc
aacccccttaaaatagaagtttttgtacagactttgcttcatttggcagccaagtccttc
agccattccttcagtgctctggcaaagtttcatgaagtcttcaagacattagctgaaagc
gatgaggggaagctacatgttttgcgagttatgtacgatgtatggaaaaaccatcctcag
atgatttctgtactgatcgacaagatgattcgaacacagattgttgattgtgctgctgta
gcaaactggatcttctctccagagctctctcatgatttcacaaggttgtacatttgggaa
atcttacattccacaatacgtaagatgaacaagcatgtacagaagatccagagggagctg
gaggaaactaaaggaaaattggagaagcagcacaagcgtagagatagtgacgatgatgat
gaccgaaacagtgatagagaagatgggccactggaggagcagattgagcgattacaggag
aaagtagagtctgctcagagtgagcaaaagaatcttttccttgttatattccagcgcttc
attatgttgcttactgagcacttagtgcgatgtgaaacaggagggattgacgtgattacg
ccttggtataagaactgtacagaaaggctacagcagatcttcttacagcatcatcaaatt
attcatcagtacatggtgactctggagaaccttttgttcacggcagagttggaccaccac
atcctggctgtattccaacagttttgtgctcttcagacctaa
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