Microcaecilia unicolor: 115465386
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Entry
115465386 CDS
T09142
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
muo
Microcaecilia unicolor
Pathway
muo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
115465386 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
muo03400
]
115465386 (MSH2)
DNA repair and recombination proteins [BR:
muo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
115465386 (MSH2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
115465386
NCBI-ProteinID:
XP_030051684
UniProt:
A0A6P7XMQ4
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Position
3:33863348..34102618
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AA seq
932 aa
AA seq
DB search
MAVQPKEKLSLDSSAESGFLQFYFSMPEKPDTTMRVFDRSDYYTVHGSDALFAAKEVFKT
NGVIKYLGSGSKKLESVVLSKMNFESVVKDLLLVRQYRVEVYKNKVGSRSSKEHDWYLAY
KASPGNLTQFEEILFGTNSMSTAVGVVGIKLATADGQRLVGVGYVDSTLRKMGVCEFPDN
DQFSNLEALLVQIGPKECVLPSGETAGDMGKLRQIVQRDGILITDRKKAEFTTKDNVQDL
NRLLKAKKGEQVTSAALPEMEKQVAMSSLSAVIKYLELLSDESNFGQFELTTFDLSQYMR
LDNAAVSALNLFQGLAEDTSGTQSLVGLLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLN
LVEAFVVDAELRQCLQEDLLRRFPDFNRLAKKLQRQTANLQDCYRLYQAINQLPTVVQTL
EKYEGAHQMLLLAVFVTPLNDLVSDFCKFQEMIETTLDMDQVENHEFLVKASFDPNLMEL
REKMNELEKSMQSSLRSAARELGLEAAKTIKLESNSQLGHYFRVTCKEEKALRNNRKFST
LDIQKNGVRFTNSKLSSFSEDYVKCREEYEEAQNAIVKEIINISSGYMEPIHTLNDVIAQ
LDAVVSFAHVSNAAPVPYVRPVILEKGQGRIVLKAARHPCIEVQDEVVFIPNDIIFEKDK
QMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDSAEVSVVDCILARVGAGDSQLKG
VSTFMAEMLETAFILRSATENSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGSFCLFA
THFHELTALADHVATVNNLHVTALTTDETLTMLYRVKQGICDQSFGIHVAELANFPKHVV
QNAKAKALELEEFQNIGKTEEDEESSSAKKRYQEKEEGEKIIQDFISKVKALPITEMSEE
DIKTKLKHLKAEVLAKNNSFVNEIVARIKVAL
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagcccaaggaaaagctgtcgctggacagcagtgcagagagtggattcttg
cagttttatttctccatgcccgagaagccggacacaaccatgcgagtatttgacaggagt
gactactacacggtgcatggtagtgatgcgctgttcgcagcaaaggaggtgtttaagact
aatggcgttattaagtacctgggttcaggaagcaagaaacttgagagtgttgtgctcagt
aagatgaactttgaatctgttgtgaaggatttgcttcttgttcgtcagtaccgagttgag
gtctacaagaataaagttggcagcaggtcatccaaggagcatgactggtacttggcttat
aaggcttctccaggaaaccttacccagtttgaggagatcctctttggcactaatagcatg
tcgactgcagttggagtcgtgggcattaagctggccactgctgacggacaaagattagtt
ggcgttggctatgttgattcaacacttaggaagatgggtgtgtgtgagtttccggacaat
gatcagttttccaacctggaagctctcctggttcagattggtcccaaagaatgtgtgctg
cccagtggggagactgcaggagatatgggaaaactgagacagattgttcagagggatggt
attctgataacagacagaaaaaaagcagagttcaccactaaagacaatgtgcaggacctc
aaccggctgctgaaagcgaagaaaggggaacaggttacgagtgcggcactgccagaaatg
gaaaagcaggttgctatgtcgtcattgtctgctgtgatcaaatacttggaactgttatct
gatgaatctaacttcggacaatttgaactcaccacctttgacctgagccaatatatgaga
ctggataatgcagctgtgagcgcacttaacctctttcagggtttggcagaagatacgagc
ggcactcagtctctggttggactgttgaacaagtgcaaaacccctcagggtcagaggttg
gttaatcagtggatcaagcagccacttatggacaagaacagaattgaggaaaggttaaac
ttggtagaggcctttgtggtagatgcggagctgagacagtgtcttcaggaagacctcctt
cgccgtttcccagacttcaaccgtctggcaaaaaagcttcagaggcaaactgcaaacttg
caggactgttacagactatatcaggccatcaaccagctacctactgttgtccaaacgctg
gaaaaatatgaaggagctcaccagatgttgttgttggctgtgtttgtaacaccccttaat
gatctcgtttctgatttctgcaagtttcaagaaatgatagaaactactctggacatggat
caggttgaaaaccatgaatttttggtgaaagcgtcctttgatcctaacctgatggagctg
agagagaagatgaacgaactggagaagagtatgcagtcctccctgcgtagtgcagcccgg
gaattgggtctggaggctgcaaagactataaaactggagtccaactctcagttggggcac
tacttccgtgttacttgcaaagaggagaaagcactgcgaaacaacaggaaattcagtact
ctagatattcagaagaatggagtgagattcaccaacagcaagctgagctctttcagtgaa
gactatgtcaaatgtagagaagagtatgaagaggcacagaacgctattgtaaaagagatc
attaatatttcttcaggctatatggaaccaatccacactctgaacgacgtgattgctcag
ttggatgctgttgtgagttttgctcacgtgtcaaatgccgcacctgtaccctacgtacgt
ccagtcatccttgaaaaaggtcaaggaagaatcgtcctgaaggctgccagacatccttgc
attgaagttcaggatgaggtagtattcatccccaatgatatcatctttgagaaagacaag
cagatgttccatattatcacaggccctaacatgggaggcaaatcaacatacatccgccag
actggagtgatagttctcatggctcagattggatgctttgtaccttgtgattcagcagag
gtgagcgtggtggactgcatcctggctcgagttggggcaggagacagtcagctcaagggg
gtctccactttcatggctgaaatgttagaaacggctttcatcctgaggtcagcaacagag
aattccctaattattattgatgaactaggaagggggacctccacatatgatggatttggc
ttggcgtgggctatatctgagtacattgccaccaaaattggttccttctgtttgtttgcc
acccattttcatgagctgactgcactggcagatcatgtggcaacagtgaataacttgcat
gttaccgcactaaccacagatgagaccctaacgatgctttaccgtgtaaagcaaggtata
tgtgatcagagttttgggatacatgtcgcagagcttgctaattttcctaaacatgttgtt
cagaacgctaaggcaaaagcactggaattggaggagttccaaaatattggaaaaacagag
gaagatgaagaaagctcatctgccaagaaacgctaccaggaaaaagaggaaggtgaaaaa
ataatccaggacttcatctccaaggttaaagcactgccaataacggagatgtctgaggaa
gatattaaaaccaaattaaaacatttgaaggctgaagtgttagccaaaaataacagtttt
gtgaatgagatcgttgcacgaataaaggttgcactctga
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