Microcaecilia unicolor: 115465745
Help
Entry
115465745 CDS
T09142
Symbol
CCDC88A
Name
(RefSeq) girdin isoform X1
KO
K25392
girdin
Organism
muo
Microcaecilia unicolor
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
muo03037
]
115465745 (CCDC88A)
Cilium and associated proteins [BR:
muo03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
115465745 (CCDC88A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK_N
HOOK
GAS
Motif
Other DBs
NCBI-GeneID:
115465745
NCBI-ProteinID:
XP_030052304
UniProt:
A0A6P7XPM2
LinkDB
All DBs
Position
3:147554089..148106574
Genome browser
AA seq
2033 aa
AA seq
DB search
MESEIFTPLLEQFMATPLVIWVKTFGALVKGNGTNLDEYVALVDGIFLNEVILQINPKSA
NQRINKKVNNDASLRIQNLSILVRQIKSYYQETLQQLIMMPLPNVLIIGKNPFSEQGTEE
IRKLLLLLLGCAVQCDRKEEFIEKIQGLDFDTKASVAVHIQEVTHNQENVFDLQLLDAAD
LSSEDLESLLRNTIFHLKRLVDERDEHRETIIELSEERDCLRFPPHPPGGHSSGDSPGMR
RTESKQHLSVELADAKAKIRRLRQELEEKTEQFLDCKQELEQMEVELKRLQQENMNLLAD
ARSARVYRDELDALREKAVRVDKLDSEVNRYKERMHDIEFYKARVEELKEDNQVLLETKT
MLEDQLEGVRARSDKLHELEKENLQLKAKFHDMEMERDMDRKKIEELVEENMTLELAQKQ
SMDESLHLGWELEQLSKTGEICEAPQMSLGHEVNELTSSRLLKLEMENQSLLKTVEELRN
AMGSAEGSNSKILKLEKENQRLSKKLGRLESEISHEKQSLQNCQALSNDLMKEKAQLEKT
IETLQENSERQIKGLEQENEHLTQTITSLRQRSQISAEARVKDIEKENKILHESIKETSS
KLNKLEFEKKQIRKELEHYKEKGERAEELETELHRLEKENEILQKKITSLKITCEKIEAL
EHENSDLELENRRLKKTLDNLKNVTFQLESLEKENSQLDEENLELRRTIESLKCINIKVA
QLELENKELENEKEQLKKGLDLMKALFKKNERLEVSYQGLDTENQRLQKALENSNKKIQQ
LETELQDLESENQAIQKNLEELKISSKRLEQLEKENKLLEQETYQLEKDKKQLEKENKRL
RQQAEIKDSTLEENNIKIINLEKENKALYKETNIFKESCIRLKELEMENKELVKRASIDK
KTLITLHEDLVNEKLKTQQMNNDLEKLTHELEKIGLNKERLLYDEQTTDDSRYKLLESKL
ESALKKSLEIKEEKIASLEARLEESTNFNQQLRQELKTVKKNYEALKQRQEEERMLQSSP
PKAGDESQSVNKWEKENQETTKELLKIKDRLIEIERNNATLQAEKQALKTQLKQLETQNN
NLQAQIQALQKQTVFLQEQNTALQTQNAKLQVENSTINSQSTSLMNQNSQLLIQQSGLEN
ENESLIKEREELKSMYDLLVKDHEKLAHVHERQAAEYESLIAKHGSLKSAHKNLEVAHKD
LEDRYNQLLKQKVQLEELEKALTAEQEKMLQENKKHETLAAVYQRLHDENERLNHTYSQL
LRENEGLQIDHKNLKSLLNNGKLEQTRLEAEFSKLKEQYQQLDITYTKLNNQCELLSQLK
GNLEEENRHLLDQIQTLMLQNRTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEKI
MDQYKFYDPSPPRRRGNWITLKMKKLIKSKKDGNRERLRSLTLPSSRSESNEGFLQLPHQ
DSQDSSSVGSNSLEDGQSLGTKKSSMVALKRLPFLRNRPKDKDKMKAFYRRSMSMNDLLQ
SMVLAGGQWTGSSENLECPDDIPTGKRRKELGSMAFSTTAINCATVNPSASFRTKQLLVN
KDTTSFEDVSPQGASDDSSTGSRIHASRPASLDSGRTSISNSNNNASVHEMKAGGVNDQS
RPQSHSSGEFNLLPDHEVWSSSNSSPVQYFGQHLKRSTRSSPMLPGIMHETESKGHQKTK
VGSPGSEVVSLKQFLEESNKLTLTQIQSASQENLLDEVIKSLSHSAELMGRDMPKKSSTL
SGKSFCDKTSTKPEQLIKSSLLKTDGNCIPDTPLKSTSSTPGKFNLEEEKLEAIQPQRQS
KDHNPYATLPRASSVISTAEGCTRRTSIHDFLSKDSRQPVSIDPSPTTADTSIPSTSSEY
CVDQQSSPFFACTTYSADSPLKKDAGHTGDPEYKSLQFNSPKTGRPHFSGAASPCPSYSD
LVGISSSNKIVSYTAPHMSQPFLSMNTELVSNISGLPQKSASNIYDKGCIAPFKGIRKDH
EIFSDSQMSDDINVKQTLSGNEFSAAPLNISASESLLQVSEDNQSVWYEYGCV
NT seq
6102 nt
NT seq
+upstream
nt +downstream
nt
atggagagtgagatatttacacccctgctggaacaatttatggccactcctctggtgatt
tgggtcaagacatttggtgctttagtaaaaggaaatggtacaaacctcgatgaatatgtg
gcattggtggatggcatattcctaaatgaggtcatacttcaaattaaccctaaatcagct
aatcaaagaataaataagaaagtcaacaatgatgcctcacttagaatacaaaatttatct
attttggtgagacaaattaaaagttattatcaggagaccttacaacagctgatcatgatg
cctttaccaaatgttttaataattgggaaaaatccattttcggaacaaggtactgaagaa
ataagaaagctactccttctgttactgggctgtgctgttcagtgtgatagaaaagaagaa
ttcatagaaaaaatccaaggtttagattttgacacaaaggcgtctgttgcagttcacatt
caggaggtaactcataatcaggaaaatgtgttcgacctgcaattattggatgctgcagat
ttgtcatcagaggatcttgagtcacttttgagaaatacaatattccatttaaaaagactt
gtagatgagagagatgaacacagagagactattatagaactctctgaagaacgggactgt
ttacgttttccacctcatcccccaggtggacattcatctggtgattctccaggcatgaga
cgtacagaaagcaagcaacacctgtcagtggagctggcagatgccaaggcaaaaataaga
cgacttagacaggaactagaagaaaaaacagaacagttcctggactgtaaacaagagctt
gagcagatggaagtggaactaaagaggcttcagcaagagaatatgaatctgcttgctgat
gctcgatctgccagagtatatcgtgatgaattagatgcactacgagaaaaggcggtcaga
gttgacaagcttgacagtgaagtcaaccgatacaaggagcgaatgcacgatattgaattt
tacaaagccagagttgaggagttaaaagaagataatcaagtactcttggaaacaaagaca
atgctggaagatcaactagagggagtccgagctcgttctgacaaattacatgaactagaa
aaagaaaatctacagctaaaggctaagtttcatgatatggagatggagcgagatatggac
agaaagaagattgaagaactggtagaagaaaatatgactctggaactggcccaaaagcaa
agtatggatgaatcgttacatcttggctgggaactagagcagctatccaagacaggtgaa
atatgtgaggcaccacaaatgtcacttgggcatgaagtcaatgaattaacatcaagcagg
ttgttgaagttggaaatggaaaaccaaagtttactgaaaactgtagaagagctgcgaaat
gctatgggttctgcagaaggaagcaattcaaaaattctgaagctagaaaaagaaaaccaa
agattaagcaagaagctgggaagacttgagagtgaaataagccatgagaaacaaagcctt
cagaattgtcaagctttgagcaatgacttgatgaaagaaaaagcacagcttgaaaagacc
atagagacacttcaagaaaactctgagcgacagattaaaggtttggaacaggagaatgag
catttaactcaaactataacttctctgaggcaaaggtcacaaatcagtgctgaagcaaga
gtaaaggatattgaaaaagaaaataaaattctccacgaatctattaaagagactagcagt
aagttgaacaagctggaatttgaaaagaaacaaatcagaaaagaattagaacattataaa
gaaaaaggagaaagagcagaagagcttgaaacagagttacatcgtcttgaaaaggagaat
gagatattacaaaaaaaaatcacaagtttaaaaattacctgcgagaagattgaggccctg
gaacatgaaaactcagacttggaattagaaaacagaagactgaaaaagactttagataat
ctaaagaatgttacttttcagttggagtcattagaaaaagagaattctcaacttgatgag
gaaaacttagaactgagacgaacaattgaatcattaaagtgcattaacatcaaggtggct
caattagaattagaaaataaagagctagaaaatgaaaaggaacaacttaaaaaaggtctt
gatcttatgaaagctttgttcaaaaaaaatgaacgcttagaagtcagctatcaaggttta
gacacagaaaatcaacgtctgcagaaggccttagaaaacagcaacaaaaaaatccagcag
ttagaaactgaacttcaagacctggagtctgaaaaccaagccatacaaaaaaatctggaa
gagttaaaaatctctagcaaacggctagaacaattagagaaggaaaataagctattagag
caggaaacctatcaactggaaaaagacaagaagcagctggagaaagagaataaaaggttg
cgtcaacaggcagaaattaaagacagtacattggaagagaacaacataaaaatcattaac
ctggaaaaagaaaacaaagccctttataaggaaacaaatatatttaaggaatcctgcata
aggctaaaagagctggagatggaaaataaggagcttgtgaaaagagcctctattgataaa
aaaacacttatcaccttgcatgaggatttggtgaatgaaaaactgaagacccagcaaatg
aataatgatcttgaaaagcttacacatgagctagaaaagataggattaaataaggagcgc
ctgttatatgatgaacagactactgatgacagtaggtacaagctgttggagtcaaaatta
gagtcagccttgaagaagtctcttgaaataaaagaagaaaaaattgcatctctagaagca
cgattagaggaatctacaaatttcaaccagcagcttcgccaagaactaaagacagtgaaa
aaaaactatgaagctctcaaacagcggcaagaagaggaaagaatgttgcaaagttctcct
cccaaagcaggtgatgaaagccaatcagtcaataaatgggaaaaagaaaatcaggaaact
acaaaagagttactgaagattaaagatagattgattgaaatagagagaaataatgccacg
cttcaggctgaaaaacaggcattgaagactcagctgaagcagcttgagacacagaacaac
aatctccaagcgcaaattcaggctctccagaaacagactgtttttttacaggaacagaat
acagccctgcaaacccaaaatgccaagcttcaggttgaaaactccactataaattcccaa
agtacttcacttatgaatcagaattcacaactactaattcaacaatctggcttggaaaat
gaaaatgaatcactaataaaagaacgagaggagctgaagtcaatgtatgatttactggtt
aaagatcatgaaaaattagcacatgttcatgaaaggcaagctgctgagtatgaatctctt
attgccaagcatggaagcctcaagtctgcacataagaacctagaggtggcacacaaagat
cttgaagataggtacaaccagttactgaaacagaaagttcagttagaagaactggaaaaa
gccctgactgcagaacaagagaagatgctacaagaaaacaaaaagcatgaaacattagct
gcagtgtaccaaagacttcatgatgaaaatgagagactgaatcacacttacagtcagctt
ttacgagaaaatgaaggtttgcaaattgaccataagaatttaaagagcttattaaacaat
ggaaagctggagcaaacaagactagaagctgaattttctaaactaaaggagcagtaccaa
caactggacattacgtacacaaaactgaataaccagtgtgaattgttgagccagcttaaa
ggaaacctggaagaagaaaatcgacatctgctagatcaaatccagactttgatgttacag
aatagaactctattggagcaaaatatggaaagcaaggatctgttccacgttgaacaaaga
caatacattgacaaattaaatgaactaagacgacagaaggaaaaattagaagagaagatc
atggatcagtacaaattttatgatccttctcctccaagaaggaggggcaactggataact
ttaaaaatgaagaaattgataaaatccaagaaagatggtaaccgtgaacgtctgaggtct
ctgactcttccatcttcccggtctgaatccaatgaaggatttcttcagctaccccatcaa
gatagtcaggatagctcttctgttggctcaaattcattggaggatggtcagtctctggga
accaaaaaaagcagcatggttgcactgaaaagactgccttttttgaggaacagaccgaag
gataaagacaaaatgaaggccttctaccgtcgctccatgtccatgaatgatctgctgcag
tccatggtcctagcaggaggacagtggacaggtagttcagagaatcttgagtgtcctgat
gatattcctactgggaaaaggagaaaggaattgggatctatggctttctctactaccgct
atcaactgtgcaactgtcaacccttctgcaagcttcagaaccaagcagttgcttgtaaat
aaagatacaacatcatttgaagatgtgagtccccaaggagctagtgatgattctagtaca
ggatcaagaattcatgcttccagaccagccagccttgatagtggcagaacatccattagc
aatagtaataacaatgcttcagtccatgaaatgaaagcaggtggagttaatgaccaaagt
aggccacaaagtcatagcagtggagaatttaaccttcttccagatcatgaagtgtggtcg
agcagcaacagcagtcctgtccaatattttggccaacatttgaaaaggagcaccagatct
agtcctatgcttccagggataatgcatgaaacagagagtaaaggacaccaaaagacaaaa
gttggttcacctggaagtgaggttgtttctttaaagcaatttctagaggaaagcaacaaa
ctcaccctgacacagattcagtcagcaagccaagaaaatcttttagatgaagtaataaaa
agtttgtcacattctgctgaactgatgggaagagacatgccaaaaaaatcttcaacatta
agtggaaaatctttttgtgacaaaacatcaacaaagcctgaacagttaataaagtctagc
cttcttaaaactgatggaaactgtattccagatacccccttgaagtctacatcaagcact
ccaggaaagtttaacttagaagaagaaaaactagaggccattcagcctcaacgacaatca
aaagatcataacccttatgcaaccttgcctcgtgcaagcagcgtgatctcaacagcagaa
ggttgtactcggagaacaagcattcatgactttttgtccaaagacagtagacagcctgta
tcaattgatccatcacccactacagctgataccagcattccatcaacttctagtgagtac
tgtgtagaccaacagtcatctcctttctttgcatgtacaacttatagtgcagattcccct
ctaaaaaaagatgcaggtcatactggtgatcctgagtataaatctttacagtttaacagt
ccaaagactggaaggccacatttttctggtgctgcttccccatgtccttcatatagtgat
ttagttggaatatcctccagtaacaagatagtgtcatacactgcaccccatatgtcccaa
ccctttttatctatgaacactgaactggtaagtaacataagtgggttgccacagaagtct
gcatcaaacatatatgataaaggatgtattgccccgtttaaaggtattaggaaagatcat
gaaatattttctgattcccagatgtctgatgacatcaatgtaaagcaaactttaagtggc
aatgaattttccgctgctcctttaaatattagtgcatctgaatccctattacaggtgtca
gaggataaccaaagtgtttggtatgagtatggttgtgtttga
DBGET
integrated database retrieval system