Microcaecilia unicolor: 115465841
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Entry
115465841 CDS
T09142
Symbol
SMARCC1
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF complex subunit SMARCC1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
muo
Microcaecilia unicolor
Pathway
muo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115465841 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
muo03021
]
115465841 (SMARCC1)
03036 Chromosome and associated proteins [BR:
muo03036
]
115465841 (SMARCC1)
Transcription machinery [BR:
muo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115465841 (SMARCC1)
Chromosome and associated proteins [BR:
muo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115465841 (SMARCC1)
PBAF complex
115465841 (SMARCC1)
GBAF(ncBAF) complex
115465841 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
HEAT_GCN1
G_path_suppress
DUF919
Motif
Other DBs
NCBI-GeneID:
115465841
NCBI-ProteinID:
XP_030052482
UniProt:
A0A6P7XA70
LinkDB
All DBs
Position
1:43753047..44295939
Genome browser
AA seq
1222 aa
AA seq
DB search
MKQKQASIGLADGSGCGNGLGLACFSARQRLLQQQQQRRRRRRRGRRRGGTSSSGGGGGS
CARAAEESASPAREEEEEEEVDDEEDEDDDGGGGGEEELGGGGSEVVSAEVERRRRREEE
DVDEEEEEENEEEEEDCCSTMAAAAALVRKKDGGPTLKFWESPETVSQLDSVRVWIGKHY
KKYVQADAPTNKTLAGLIVQLLQFQEDAFGQHVTNPAFTKLPATCFMDFKASGTLCHILG
SAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNFEKTLVQNNCLTRPTVYLVPDLELKLASK
LKDIVKRNQGTVTDEKSKASHHVYPIPTSLVDDEWLRPVMKRDKQVLVHWGFYPDSYDTW
VPTNDLDAEVEAPAVPEKPWRVYAKWILDTDVFNEWMNEEDYEVDENKKPVAFRQRISLK
NDEPAHSPERRERKTTASAKKRKRSPSPPATLLEPKKKTGKKGQTAMHGKKKGQKDDDEQ
EDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSEHTPVKGGFIADLDEQEDETVAASGKEDD
DPGKGDQSRSVDSSEDNVTEQTNHIIIPSYASWFDYNCIHIIERRAVPEFFNGKNRSKTP
EIYLAYRNFIIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDAESR
PMAXGPPPTPHFNVLADTPSGLAPLHLRTPQIPAAQQMLNFPEKNKDKPTDLQNFGLRTD
IYSKKTLAKSKGASAGREWLEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRL
PIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSR
VREEVPLELVEAHVKKVQEAARISGKVDPTYGLEHSCIAGTGSNDPGNSADGTEEDKMET
ETTEAPPHEKAEIKGESETESGERPSYGTNEKPTDKEEDGETTEKTEEEAEENKENVDLA
KEKENSLVKKKMEHDISEGNVVTAAAAALASAATKAKHLAAVEERKIKSLVALLVETQMK
KLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAEMRARQQLEQQHGSN
TQQSAGPAGSGIAPLASSNLSGLMSHQQPSPYSTLHHQMPLPHVPQQGQMPSTGTMISGQ
TIPGRIMSNISSNVHSAGGPHPPPASSLPPLSGNIVGPRAPLAPNGMYPPAQQQQQLPQA
SSQPSSDGSTPPPSVPVASSTP
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaaagcaagcgagcattgggctggcggacggtagtggctgcggcaacggcctc
gggctggcgtgctttagcgcgcggcagcggctgctacagcagcagcagcaacggcggagg
cggcggaggagggggcggcgtcgcggcggcaccagcagcagcggtggcggcggaggaagc
tgtgcacgcgccgccgaagagagcgcgagcccggctagagaggaggaggaagaggaggag
gtagacgacgaggaggacgaagacgacgatggtggcggcggcggtgaagaagaattagga
ggcggtggcagtgaggtggtttccgctgaagtggagcggcggcgccgccgggaggaggag
gacgttgacgaagaggaggaggaggagaacgaggaggaggaagaagactgctgctctacg
atggcagcggcggctgccctggtgcggaagaaagacggcggaccgacgctgaagttctgg
gagagcccggagacggtgtcacagctggattcagtgcgggtgtggatcgggaaacattat
aagaagtatgttcaagcagatgcccctaccaacaaaaccttggctggcttgatagttcaa
ctgcttcagtttcaagaagatgcttttggacagcatgtgaccaacccagcttttaccaaa
cttcctgcaacatgcttcatggattttaaagcttctggaacattatgccacattcttggt
tctgcctacaaatacaaaaatgaacagggatggaggagatttgaccttcagaacccttca
cgaatggatcgaaatgtagaaatgtttatgaactttgaaaaaacactagtacagaacaac
tgtctgaccagaccaactgtctaccttgttccagatcttgagctcaagttggccagtaaa
ctgaaggacattgttaagcgtaatcagggaacagtcactgatgagaagtcaaaagcctcg
caccatgtttaccccattcctacctcactggttgatgatgagtggttgagacctgtgatg
aaaagagacaaacaagtcttggtccattggggtttttacccagacagctatgacacatgg
gtccccaccaatgatcttgatgctgaagttgaagcccctgcagtcccagagaaaccatgg
agggtttatgcaaaatggattctggatactgatgttttcaatgaatggatgaatgaagaa
gattatgaggttgatgagaacaagaagccggtggctttccgccagcggatctccctgaag
aatgatgagcctgcacacagtcctgagagaagagagaggaagacaacagctagtgccaag
aaaagaaaacgttctccatctccacctgccactctattggagcccaagaaaaagactggg
aaaaaaggtcagactgctatgcatggcaagaagaaagggcagaaggatgacgacgaacag
gaagaccttacaaaagacatggaggatccaacgcctgttcccaacatagaggaggttgtg
cttcccaaaaatgtgaacccaaagaaagacagtgagcacacacctgtaaaaggaggattt
attgcagatctagatgaacaagaagatgagacggtggctgcaagtggaaaggaagatgat
gatcctggtaaaggtgatcagagccgatcagttgactcaagtgaagacaatgtcacagaa
cagacaaaccatatcatcatcccaagttatgcatcttggtttgattataactgcattcat
ataattgaacgccgtgctgttccagagttcttcaatggaaaaaataggtccaaaacccca
gaaatatacctggcttaccgaaacttcattattgatacataccggctgaatcctcaggag
tacttaaccagcacagcctgcaggagaaatctaactggagatgtctgtgctgtaatgagg
gtacatgccttcttggagcagtggggccttgttaattaccaagtagatgcagagtctcgt
cccatggcanntggccctccacctactcctcattttaatgtgcttgcagataccccatca
ggacttgcacctctgcacctccgaacccctcagattcctgctgctcaacaaatgttgaat
tttcctgagaaaaacaaagacaagccaacagacctgcaaaactttggtttgcgcacagac
atttactcaaagaaaacattagcaaagagtaaaggagccagtgctggaagggaatggttg
gagcaggagacacttctactgttggaggctctggaaatgtacaaagatgactggaataag
gtttcggagcatgtaggcagccgcactcaggatgaatgcattctccacttcctaaggctt
cccattgaagacccttatttggagaattcagatgcatcacttggtcctctggcttatcag
cctgtcccctttagccagtctggaaatcctgttatgagtacagttgctttcttggcttct
gtggtggaccccagagtggcatcagctgcagccaaagctgctctagaggagttttctcgg
gtccgggaggaggtacctttagaattggtagaagcccatgttaagaaggtacaagaagca
gccaggatatctgggaaagtcgatcccacgtatgggctggagcatagctgcattgcagga
actggttcaaacgatcctggtaattctgctgatggaacagaagaagataaaatggaaaca
gagacaacagaagcaccgcctcatgaaaaggctgaaatcaaaggggaaagtgaaactgag
agtggtgagagaccctcatatggaacaaacgagaaacctactgataaggaagaagatggt
gagaccactgaaaagacagaagaagaggcagaggagaacaaggaaaatgttgatttagcc
aaggagaaggaaaatagccttgtgaagaagaaaatggagcatgatatttcagaagggaat
gtggtaactgctgctgctgctgctttggcctctgctgcaaccaaagcaaagcatctggca
gcagtagaagagagaaagatcaaatcccttgttgctctccttgtggaaacacaaatgaag
aaacttgagatcaaacttcgtcattttgaagagctggaaaccattatggacagagaaaaa
gaggctcttgaacaacaaaggcaacagctgcttacagagcgtcagaactttcacatggag
cagctgaagtatgctgaaatgagggctcgtcaacagctggagcagcagcatggctcaaac
acacagcagtctgcaggtcctgctgggtctggcatagcaccccttgcatcatccaacctg
tcaggacttatgtctcatcagcagccatctccgtattccacactgcaccatcagatgccc
ctgcctcatgtaccacagcaaggtcagatgccaagtacaggtaccatgatatctggtcaa
actattccaggccgcataatgtcaaacatctcatccaatgtgcactcagctggtggtcct
caccctccacctgcatcaagtctgccaccattgtctggaaacatagttggaccacgtgca
cctttggcaccaaatggcatgtatccaccagcacaacaacagcagcagctgcctcaagct
tcatctcagccatcatctgatggatcaacaccacctccctcagtaccagtagcctcttca
actccttag
DBGET
integrated database retrieval system
