Microcaecilia unicolor: 115466368
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Entry
115466368 CDS
T09142
Symbol
XAB2
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
muo
Microcaecilia unicolor
Pathway
muo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115466368 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
muo03019
]
115466368 (XAB2)
03041 Spliceosome [BR:
muo03041
]
115466368 (XAB2)
Messenger RNA biogenesis [BR:
muo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
115466368 (XAB2)
Spliceosome [BR:
muo03041
]
Complex B
Other components
Prp19-related factors
115466368 (XAB2)
Complex C
115466368 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_2
TPR_12
TPR_8
TPR_19
TPR_15
TPR_16
ARM_TT21_C
Mad3_BUB1_I
ARM_TT21
RPN7
TPR_1
LTN1_E3_ligase_6th
Motif
Other DBs
NCBI-GeneID:
115466368
NCBI-ProteinID:
XP_030053418
UniProt:
A0A6P7XLN1
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All DBs
Position
3:complement(232101798..232250462)
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AA seq
834 aa
AA seq
DB search
MNWKEEEDLQYEEEILRNPFSVKCWIRYIEFKQNAPPSVLNLIYERALKELPGSYKLWYN
YLKQRRKQVKVRCITDPGYEEVNNCHERALVFMHKMPRIWLDYCRFLMDQSKITRTRRMF
DRALRALPITQHHRIWPLYLKFVRLYPLPETAVRVYRRYLKLSPESAEEYIDYLRSIDRL
DEAALRLATIVNYEDFVSKEGKSNYQLWHELCNLISQNPDKVKSLNVGAIIRGGLTRFTD
QLGKLWCSLADYYIRSGHFEKARDVYEEAIQTVMTVRDFTQVFDSYAQFEESMIAAKMET
TSELGKEEEDDVDLELRLARFEQLINRRPLLLNSVLLRQNPHNVHEWHKRVKLYEGKPRE
IINTYTEAVQTVDPLKATGKPHGLWMAFAKFYEENGQIEDARTIFDKATKVNYKQVDDLA
SLWCEYGEMELRHENYDQALHILRKATAMPGKKAEYFDTSEPVQNRLYKSLKVWSMLADL
EESLGTFKATKAVYDRILDXRIATPQIIINYAXFLEEHKYFEESFKVYERGISLFRWPNV
YDIWNTYLTKFIDRYGGKKLERARDLFEQALDGCPCKFAKTIYLLYAKLEEEFGLARHAM
AVYERATRAVEPAEQYEMYNIYIKRAAEIYGVTYTRSIYEKAIEVLSDEHSREMCLRFAD
MESKLGEIDRARAIYSYCSQMCDPRLTATFWQTWKDFEIRHGNEDTIREMLRLKRSVQAT
YNTQVNFMASQMLKISSTTDLSSGQREMDDMKLLEQRAEQLAVEAEKDKPRVKEKILFVR
SDASRSELAELTKEANPDEIDIDEEDESNEDEPDEVSVQQRTVPSAVFGSLKDD
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgaattggaaggaagaagaggatctacaatatgaagaggaaattcttcgcaatccattt
tctgtgaagtgttggattcgttacattgagtttaaacagaatgctcccccaagtgtgctg
aatctgatttatgagagagccctcaaggagctgccaggaagctacaagctatggtataat
tatctgaagcagcgtcggaaacaagtgaaagtcaggtgcatcacagatccaggctatgaa
gaagtgaacaactgccatgagagggcattggtgttcatgcacaagatgccccggatctgg
ctggattactgtcggttccttatggatcaaagtaagatcacacgtactcgtcggatgttt
gaccgggcacttcgagccctccccatcacacagcaccatcgcatctggccactctactta
aaatttgtgcgtctctacccattgccagagactgctgtgcgggtctacaggaggtacttg
aagctaagccctgagagtgctgaagagtacattgattacctccggtccattgatcgtctg
gacgaggcagctttgcgccttgctaccattgtcaattacgaagattttgtgtccaaggag
ggcaagtccaactatcagctgtggcatgaattatgtaacctgatctcccagaatccggac
aaagtgaagtctctaaatgtgggtgccattattcgtgggggcttgactcgcttcacagac
caactgggcaaactctggtgctccttggcagactactacattcgaagtggccattttgag
aaggctcgggatgtttatgaggaagcaatccagacagtgatgacggtccgggatttcacg
caagtgtttgacagctatgcccagtttgaggaaagcatgattgcagccaaaatggagact
acatctgagttgggaaaggaagaagaggatgacgtggacctggagctgagattagcacgt
tttgagcagctgatcaatcgccgacccctgcttctgaacagtgtactgctgcggcagaac
ccccataacgtgcatgaatggcacaagagggtgaaactgtatgaaggaaagccacgagag
attataaacacctacacagaagcagttcagactgtggatcctctcaaagctactgggaaa
cctcatggactctggatggcttttgccaagttttatgaagaaaatggacagattgaggat
gcaaggacaatctttgacaaggccaccaaagtgaattataaacaggtggatgacctggca
agtttgtggtgtgaatacggtgagatggagctgcggcatgagaattatgatcaggccttg
cacatcctgcggaaagccacagccatgccaggaaagaaggcagaatactttgatacatca
gaaccagtccagaatcgcttgtacaaatccctcaaagtctggtccatgcttgcagacctg
gaggaaagtctaggcaccttcaaagctacaaaagcagtgtatgatcggatcctggacncg
cgcattgcaacacctcaaattatcatcaactatgctntatttctggaggagcacaaatac
tttgaggagagcttcaaggtgtatgagagaggaatatctctattcaggtggcccaatgtg
tacgatatctggaacacctacttgaccaaattcattgaccgctatggagggaagaaactg
gagagagcccgggacctctttgagcaggcactggatggttgtccatgcaaatttgcaaaa
actatttatttactatatgctaagctagaagaggagtttgggttggcacgacatgctatg
gcagtgtatgaacgggcaactcgtgctgtggagccagcagaacagtatgagatgtataac
atctatatcaagagagcagcagagatttatggtgtcacatacacacgcagcatctatgag
aaagctatcgaggtactgtcagatgaacactctcgtgagatgtgtcttcgttttgctgac
atggagtccaagttaggagagattgacagggcccgagccatttattcatactgctcgcag
atgtgtgacccacggctgacggctaccttctggcagacatggaaagactttgagatccgc
catgggaatgaggacacaatccgtgaaatgttacgacttaaacgcagcgtacaagccaca
tacaacacacaggtcaacttcatggcatcacagatgctgaaaatctctagcaccacagac
ttgtcttctggacaaagagagatggatgacatgaaactgctagagcagagggcagagcag
cttgctgtggaagctgagaaggacaagcccagagtcaaagagaaaatcctctttgtccgg
agtgatgcttcacgtagtgagctggcagagctcaccaaagaggccaacccagatgaaatt
gacatagacgaggaagatgaaagtaatgaggatgaaccagatgaggtaagcgtgcagcag
agaactgtgccctcggcagtatttggaagtctaaaggatgactga
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