Microcaecilia unicolor: 115466885
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Entry
115466885 CDS
T09142
Symbol
HBS1L
Name
(RefSeq) LOW QUALITY PROTEIN: HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
muo
Microcaecilia unicolor
Pathway
muo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115466885 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
muo03019
]
115466885 (HBS1L)
Messenger RNA biogenesis [BR:
muo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
115466885 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
UBA_RAD5A
GTP_EFTU_D4
AAA_29
Motif
Other DBs
NCBI-GeneID:
115466885
NCBI-ProteinID:
XP_030054311
UniProt:
A0A6P7XMC0
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All DBs
Position
3:339343888..339672374
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AA seq
678 aa
AA seq
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MARHRNVRGYNYDEDFDDDDLYGQSVEDDYCISPATAAQFIYSKREKPTAFAEPLEEEFG
DEEEPGDCDTSDPSLSGPDQARLYSCLDHMREVLGDSVAEQEMIRAVLSSKFDVSQALDL
VLTRNDKQNMKTISSGKTAKGKTRDVQCTQSDSDIVPKVAKMTVSGKKXTMGFDVPCTVP
EENDHIAGMTRKAPPAEDVSGVVEMASKVAAASQAIQLSEEVSPAAVPAKSSSKGKQQID
VKAELEKRQGGKQLLNLVIIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQESKKAGKAS
FAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITGAAQADVAI
LVVDASRGEFEAGFEAGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQEITSKLG
HFLKQAGFKESDVAFIPTSGLGGENLVSRSKSDELTQWYKGPCLIEQIDSFKPPQRSVEK
PFRLCVSDVFKDQGSGFSVTGKIEAGYVQTGDRLLAMPPNETCTVKGITLHDEAVDWAAA
GDHVSLTLTGMDIIKINVGSVFCYPKEPIRTCTRFRARVLIFNFEIPITQGFPVLLYYQT
VSEPATIKKLVSVLHKSTGEVVKKKPKCLTKGQNALIEIQTQRPIALELYKDFKELGRFM
LRYSGSSIAAGVVTEIKD
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggctcgccacaggaacgtgcgtggatacaactacgacgaagattttgatgatgatgac
ctctatggccagtctgtggaagatgattactgcatttcaccagcaacagctgctcagttc
atttactcaaaaagggagaaacccacagccttcgccgagccgttagaagaagaatttggg
gatgaagaagaaccaggtgactgtgacacatccgacccatcactttctggacctgatcaa
gctcgcctctattcctgccttgatcatatgagggaagtgcttggggactctgtggctgag
caggagatgattcgagcagtgctcagcagtaaatttgatgtgtcgcaggccttggacctt
gttctcacacgaaatgacaaacagaacatgaagactatctcttctgggaaaacagcaaaa
ggaaaaacaagagatgtccagtgcacacaatccgattctgacattgtgccaaaggtagcg
aaaatgacagtgtctgggaagaagnaaaccatgggatttgacgttccatgtacagtgcct
gaagaaaatgatcatattgctggcatgactcgaaaggctccacctgccgaagatgtgtct
ggggtggtggaaatggcctctaaagtagctgctgcttctcaagctattcaactgtcagaa
gaggtgagtcctgcagcagttccagcaaagagctccagcaaaggaaagcagcaaatagat
gtgaaagccgaactggagaaaagacaaggaggaaaacaattgctcaatctggtaataatt
ggtcatgttgatgctggaaaaagtactcttatgggtcacttactttacctgcttggaaat
gttaacaaaagaaccatgcataaatatgaacaggaatctaaaaaggctggaaaagcttca
tttgcatatgcttgggtattggatgagactggcgaagaaagagaaaggggagtaaccatg
gatgtgggcatgactaaatttgagacaaaaactaaagttattacgttgatggatgctcct
ggacacaaagattttatccctaatatgatcacaggagcagctcaggctgatgtggccatt
ttggttgtagatgccagtagaggagagtttgaagctgggtttgaggctggtgggcagaca
cgagagcatggacttctggttcgctctttaggagtaacgcagctggcagttgcagtcaat
aaaatggatcaggtgaactggcagcaggaaagatttcaggaaataaccagtaaacttgga
cattttcttaaacaagcaggctttaaggaaagtgatgtagcttttataccgacaagtgga
ttgggtggtgaaaatctagtcagtagaagcaagtcagatgaacttacccagtggtataaa
gggccttgtctgatagaacaaattgattctttcaaaccgccacagagatcagtggaaaaa
ccattcagactttgcgtatctgatgtttttaaagaccaaggatcgggattctctgtgact
ggtaaaatagaagcaggctacgtccagactggagatagactgctggcaatgcctcccaat
gaaacatgtacagtgaaagggattacactgcatgatgaggcagttgactgggcagcagca
ggagatcacgtcagtctcactttgaccggtatggatatcatcaaaatcaatgttggatct
gtattctgctatcccaaggagcccatcagaacctgcactcgtttcagagcacgagtcctc
atctttaattttgagattcccatcactcaaggttttcctgtacttttgtactatcaaact
gtaagtgagcctgccacaattaagaaattagtgagtgttttgcacaagagtactggagaa
gttgtaaagaagaaacctaagtgcttgacaaaaggccagaatgcactaatagagatacag
actcagaggcccattgcccttgaactgtataaggacttcaaggaacttgggcgcttcatg
ctccgctacagtggatcttctatagctgcaggagtcgtcactgagattaaagattga
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