Microcaecilia unicolor: 115467053
Help
Entry
115467053 CDS
T09142
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
muo
Microcaecilia unicolor
Pathway
muo00100
Steroid biosynthesis
muo01100
Metabolic pathways
Module
muo_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
115467053 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
muo01006
]
115467053 (FDFT1)
Enzymes [BR:
muo01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
115467053 (FDFT1)
Prenyltransferases [BR:
muo01006
]
Terpene biosynthesis
Squalene/phytoene synthase
115467053 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
HAUS4
SCC3_C
Octopine_DH
Motif
Other DBs
NCBI-GeneID:
115467053
NCBI-ProteinID:
XP_030054580
UniProt:
A0A6P7XV83
LinkDB
All DBs
Position
3:396455582..396579545
Genome browser
AA seq
454 aa
AA seq
DB search
MACTNCKTAVSLFKRTLSLSPAQKHSSQRSLLSVNRRHERGLREGRIVQNCVPLQTHAVS
RIHPSCFRQQDSISDSLKTCYKYLNETSRSFAAVIQALDGELRHAVCIFYLVLRALDTIE
DDMTIALETKIPMLHDFHTYLYQPEWRYVESKEKDRQVLEDFPTISLEFRSLAKNYQDVI
TDICHKMGVGMAEFLEKKVETLQEWDKYCHYVAGLVGIGLSRLFSASELEDPVVGQDAEL
SNSMGLFLQKTNIIRDYLEDQLEGREFWPREVWSKYAKKLSDLAKPENIDMAVQCMNELV
TNALHHVPDVLTYLSRLKNQSVFNFCAIPQMMAIATLAACYNNQQVFKGVVKIRKGQAVT
VMMDATNMQAVKAIIYQYADEIYQKIPLSNPSSKKTQRIILCIRNLSLPNGTLISRNHFS
PVYLSCAMLLAALSWQYLSAMSQASDEYVQASEN
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcctgcacaaactgtaagacggctgtttctctcttcaagagaactttgtccctctca
ccagcccaaaaacatagcagccagcgttctctgttgtcagtgaacaggcgacatgaaagg
gggttgcgagaaggcaggatcgtacaaaactgtgtgcctttacagactcatgcggtctct
cgaattcacccttcctgctttcgccaacaggactccataagtgacagtctgaaaacttgc
tacaagtacctaaatgagaccagcagaagctttgccgctgtgattcaggcactggatgga
gagctgcggcatgcagtatgtatattttatctggtcctccgtgctctggacactatagaa
gacgacatgactattgccttagaaacaaagattcccatgttgcatgattttcacacctac
ctttaccagccagagtggcgatacgttgagagcaaagagaaggataggcaagttcttgaa
gattttccaacgatttccttggagtttcggagtcttgcaaagaattatcaggatgtcatt
actgatatatgccacaagatgggtgtaggaatggctgagtttttggaaaagaaggtggaa
accttgcaggagtgggacaagtactgccattatgttgcgggactagtgggaattggattg
tctcgtctgttttctgcatcagagctggaagatcctgtggttgggcaagatgcagagctc
tcaaattctatgggccttttcctgcagaaaaccaacattattcgtgattacctagaggat
cagctggaggggcgtgaattctggcccagagaggtttggagcaagtatgctaagaagctg
tctgacttggctaagccagagaacattgatatggctgtgcagtgtatgaacgaactggtt
acaaatgctcttcaccacgtgcctgatgtccttacctatctgtctaggctgaagaaccaa
agtgtgttcaatttttgtgctattccacagatgatggccattgctactctggctgcctgt
tacaacaaccagcaggtattcaagggtgtagtcaaaattcggaaaggacaagctgtcaca
gtaatgatggatgccacaaacatgcaggctgtgaaagcaataatttaccagtatgctgat
gagatatatcagaaaattccgttgtcaaacccttcatctaaaaaaacacaaaggattatt
ctctgcatcaggaacttgagtttgcctaatggcacactgatttcccgcaatcatttctca
ccagtctatttgtcgtgtgctatgcttttggcagcattgagttggcagtacctaagtgca
atgtcccaagcctctgatgaatatgttcaagccagtgagaactga
DBGET
integrated database retrieval system
