Microcaecilia unicolor: 115467130
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Entry
115467130 CDS
T09142
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
muo
Microcaecilia unicolor
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
muo03041
]
115467130 (DDX1)
03016 Transfer RNA biogenesis [BR:
muo03016
]
115467130 (DDX1)
Enzymes [BR:
muo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115467130 (DDX1)
Spliceosome [BR:
muo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
115467130 (DDX1)
Transfer RNA biogenesis [BR:
muo03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
115467130 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
115467130
NCBI-ProteinID:
XP_030054708
UniProt:
A0A6P7XQ86
LinkDB
All DBs
Position
3:complement(426179807..426403450)
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AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEQMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPI
IQIVYETLKDHQEGKKGKATVKTGGAVFNKWQMNPYDRGSAFAIDSDGLSCQSREVKEWH
GCRSTRGVNKGKYYYEVSCHDQGLCRIGWSTSQASLDLGTDKFGFGFGGTGKKSHNKQFD
SYGEEFTMHDTIGCYLDFDKSTVKFSKNGKDLGHAFDIPSHLKDQTFFASCVLKNAELKF
NFGDEDFKFPPKDDFVALTKAPDGHVVKSQQTGSAQVGQTKNLPNAPKALIIEPSRELAE
QTLNNIKQFKKDVDNPKIRELLIIGGVAAKEQLSALEQGVDIVVGTPGRVDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRMHTQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKTDKLWERLGRNHVKTDDVHAKDNTRPGAN
SPEMYSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKLDCDNMEQYLIQQGGGPDRKGHQF
SCVCLHSDRKPHERKQNLERFKKGEARFLICTDVAARGIDIRGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVAAEKEKVWYHVCSSRGKGCYNTRLKEEGGCTIWYNEMQLLG
EIEEHLTCTISQVEPDLKVPLDDFDGKVVYGQRRAGGGGLYKGHVDVLAPTVQELSSLEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggctttctcagagatgggtgtgatgcctgagatagctcaggctgtggaacagatg
gactggcttttgcccacagatatccaagctgagtctatcccattgatcttaggaggtggt
gatgtgcttatggctgcagaaactggaagcggaaagacaggggctttcagtatccctatt
attcagatagtttatgaaacactcaaggaccatcaggaagggaaaaagggcaaagccaca
gtcaagactggtggtgcagttttcaacaagtggcagatgaacccttatgacagaggatca
gcatttgcaattgattccgatggcctttcttgccaaagcagagaagttaaggagtggcat
ggatgtagatcaactagaggagtgaataaaggtaaatactattacgaagtgtcctgtcat
gaccaaggattgtgcagaattggatggtctacttcgcaggcttccttggacctaggtact
gacaaatttggctttggctttggtggaactggaaagaaatctcacaacaagcagtttgat
agctatggagaggagttcactatgcatgatactattggctgctatttagatttcgacaaa
agcacagtcaagttctccaaaaatggaaaagatcttggtcatgcctttgatattccatca
catttgaaagaccagacgttttttgcatcttgtgtgctgaagaatgcagaactgaaattc
aacttcggtgatgaagacttcaagtttccaccaaaagatgattttgttgcactcactaag
gctcctgatggtcatgttgtgaagtcacagcagacaggaagtgcacaagtgggtcaaaca
aagaatcttcctaatgctccaaaagcactgatcattgaaccttccagagaattagcagag
cagaccttgaacaacatcaagcaatttaaaaaagatgtggataatcctaaaataagggaa
ctcttgataattggtggtgtggctgcaaaagagcaactatctgctttggagcaaggagta
gatattgttgtgggaactcctgggagagtggatgacctagtgtccacgggaaagctcaac
ttgtctcaagttagatttctggttcttgatgaagctgatggccttctttctcaaggttat
tcagattttatcaacaggatgcatacccagattcctcagatcacgtcagatgggaagagg
ctgcaggtgattgtctgctctgcaactctccactcctttgatgtgaagaaattgtcagag
aagattatgcatttcccaacatgggtggatctaaagggcgaggattcagtgccagaaact
gtacaccatgttgttgttcctgtgaatcccaaaactgacaaactgtgggaacggcttggc
agaaatcacgtgaaaaccgatgacgttcatgcaaaggataacacaagacctggtgctaat
agtccagaaatgtattctgaagccattaaaattctgaagggagaatatactgttcgagca
atcaaagaacacaagatggatcaagcaataattttttgcagaacaaaactagactgtgat
aatatggaacaatatctcatccaacaaggaggaggtcctgatagaaaagggcatcagttt
tcatgtgtatgcctgcatagtgacagaaaaccccatgaaagaaaacaaaatttggaaaga
tttaagaaaggagaggcaaggttccttatctgtactgatgtagctgccagagggattgat
atccgtggtgtcccctatgttatcaatgtcacccttcctgacgaaaaacaaaactatgtt
catcgcattggacgagttggcagagctgaaagaatgggtctggctatttctcttgtggca
gcagaaaaagagaaggtttggtatcatgtatgcagtagtcgtggaaagggttgctataac
accagactgaaggaagaagggggttgtaccatatggtacaatgagatgcagctactaggg
gagattgaggaacatctgacctgtaccatatctcaagtggaacccgatctgaaagtacca
ttggacgattttgatggaaaggtggtctatggacaaagaagagctggtggtggtggactt
tacaaaggtcatgtagatgttttggcacccactgtacaagagctgtcttcccttgaaaaa
gaagctcagacatctttcctacatcttggctaccttcccaatcagctcttcagaacattc
tga
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