Microcaecilia unicolor: 115468053
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Entry
115468053 CDS
T09142
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1 isoform X1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
muo
Microcaecilia unicolor
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
muo03000
]
115468053 (SOX1)
Transcription factors [BR:
muo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
115468053 (SOX1)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
115468053
NCBI-ProteinID:
XP_030055429
UniProt:
A0A6P7XY97
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Position
4:complement(268733688..268734839)
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AA seq
383 aa
AA seq
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MYSMMMETDLHSPGGQPPNNTGQVGAGGGTKSNQDRVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLLKKDK
YSLAGGLLAAGAGGGPGVSMGVGVSPAGVGQRLESPGGAAAGGGYAHMNGWANGAYPGSV
AAAAAAAAMMQEAQLAYSQHPGAGAHHHHPHHPHHHHPHHPHNPQPMHRYDMSALQYSPL
SGSQSYMSASPSGYGALSYGGSSAGAAAGAGAGGPPQQQQPQQPSQHQSSAAAVAAAAAA
AAAASTGALGALGSLVKSEPSVSPPVTSHSRGPCPGDLREMISMYLPGGEGGDPAAASRL
HSLPQHYQSAGTGVNGTVPLTHI
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagacggacttgcactcgcccggcgggcagcccccgaacaac
acgggccaggtcggggcgggcggcgggaccaaaagcaaccaagaccgggtgaagagaccc
atgaacgccttcatggtatggtcccgcgggcaacgccgcaagatggcccaggaaaacccc
aagatgcacaactcagaaatcagcaagcgcctgggcgctgaatggaaggtgatgtcagag
gccgagaagcggccttttatcgacgaggctaagcggttgcgggcgctgcacatgaaggag
cacccggattataaatatcggccccgacgcaagaccaaaaccctgctcaagaaggacaag
tactcgctggccggcgggctactggcggccggcgccggaggaggccccggggtcagcatg
ggggtcggggtgagcccagcaggggtgggccagcgcctggagagccccggcggggcagca
gccgggggcggctacgcgcacatgaacggctgggccaacggcgcctacccgggttcggtg
gcggcagcggcggcggcagcggccatgatgcaggaggcgcagcttgcctacagccagcac
ccgggagccggggcgcaccaccaccacccgcatcacccgcaccaccaccatccgcaccac
ccgcacaacccacagcccatgcatcgctacgacatgagcgccctgcaatacagccccctc
tccggctcccagagctacatgagcgcctcgccctccggctacggcgccctctcctacggc
ggcagcagcgctggggcggcggcaggtgcgggagcgggggggcccccgcagcagcagcaa
ccacagcagccgtctcagcaccagagctctgcagccgccgtggcagcagcggctgcggct
gcggcagctgcctccactggcgctctgggcgccctaggttcactggtgaaatcggagccc
agcgtgagtcctcctgtcacctcgcactcgcggggtccctgccccggagacctgagagag
atgatcagcatgtacttgccgggcggagaaggaggggacccggcggcggccagtagactg
cattccttgccccagcactaccagagcgcgggcacgggggtgaacgggacggtgcccctt
acccatatctaa
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