Microcaecilia unicolor: 115468675
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Entry
115468675 CDS
T09142
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
muo
Microcaecilia unicolor
Pathway
muo03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
115468675 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
muo01009
]
115468675 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
muo04515
]
115468675 (PCDH20)
Protein phosphatases and associated proteins [BR:
muo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115468675 (PCDH20)
Cell adhesion molecules [BR:
muo04515
]
Cadherins
Protocadherins
115468675 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
DC_STAMP
Motif
Other DBs
NCBI-GeneID:
115468675
NCBI-ProteinID:
XP_030056427
UniProt:
A0A6P7XM62
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All DBs
Position
4:complement(111489590..111493864)
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AA seq
893 aa
AA seq
DB search
MGHQTSRSSISIRNLPHLFLCMVFITTGPFKCFASYSRATELLYTVNEGLPEGVLIGNIK
ADLQLGLSVDSPLSFSLVSKGISGQYVSLNNSTGELYTSAHELDREAQCQESLGMQDCLL
LLDIIILPQEYFRFVKVKIVIRDVNDNAPQFPVSQITVSVPENAQVNTRLAIEHPAFDPD
VGINGVQTYRLGDYFGVFTLDVEENESGERTPYVIVMGPLDRETKPEYVTRIIAEDGGNP
PLLGSATLLIHISDINDNCPLFSESQINVTLYGNSTLGTTVAIVQAEDKDLGSNAQITYT
FSERVPQSTRDLFNLDEITGIIKLSNTIDGNTIRLHKLTVLANGPGCIPAVITIQVSVIK
VIFRPPEVVPRYIANEVEGIVYLKESEPVSSPIAFFTVKDPDEKNKVDCFLEGDGPFRLS
PYKPYTNEYLLETTKPLDYEMQQSYEISVVAWSTHGFHVKTYVKVQVLDDNDNSPIFIQP
VVELSIEENNAPNVFLAKLYATDADSGARGEVSYFLGPDAPSYFSLDKITGVLTVSTRLD
REEKEKYRFTVKAKDNGSPPRDSIATVILTILDKNDNSPRFINKDFSFFVPENFPGLGEI
GVISVTDADTGKNGWVALSVINGSDIFVIDTGKGLLRAKVSLDREQQSSYVLWVEAVDGG
DPALSSTAKITILLLDVNDNPPLVLFPQSNMSYLLVLPSTLPGSPITEVYAVDKDTGMNA
VIAYSIIGRRGPRPESFRIDSKTGNITLEEALMRHDYGLYRLLVKVSDHGYPEPLYSTVM
VNLFVNDTVSNESYIESLLRKEPEINIEEREPQIAMEPTQQRVESASCMPLLVALSVISL
GCIILTTILGICFCLKKDTKHHRQNENLEVQMPLNGKIDLHILERKPMAISNI
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggggcatcaaaccagccggagcagcatcagtatcagaaatctgccgcacttgtttctg
tgtatggtgttcatcactactggaccttttaagtgctttgcaagctatagccgagccaca
gagctgttgtacacagtaaatgaaggattacccgaaggagtgctcatagggaatatcaaa
gcggatttacagttggggctctcagttgattctcctctttccttcagcttggtatcaaaa
gggatcagtggccagtatgtgagccttaacaacagcactggggagctgtatacgtctgcc
catgaacttgaccgggaagcccagtgccaggaaagcttgggtatgcaggactgcctcctt
ctcctggacatcatcatcctgccccaggagtatttcaggtttgtgaaagtaaaaattgtc
attcgagacgtcaatgacaatgcacctcagttccctgtctcccaaatcactgtttctgtg
ccagagaatgcccaggtgaacaccaggcttgccattgagcacccagcttttgatcctgat
gtgggaataaacggagttcagacctaccgactcggggactattttggagtgtttactctg
gatgtggaagaaaatgaaagtggagaaaggacaccttacgtgattgtcatgggtcctctg
gacagggaaacaaaacctgagtatgtgaccaggatcattgcagaagatgggggcaatcca
ccactgctgggaagtgccactctgttgattcatataagtgatattaatgataactgcccg
ttgttctctgagtcccaaatcaatgtgactctgtatggaaactccactctgggaacaaca
gtagctattgtgcaagcagaggataaggacttgggatcaaatgctcagataacatatact
ttcagtgaaagagttcctcagtcaacaagggacctgttcaaccttgatgaaattacagga
attataaaactgtctaatacaattgatggcaataccatccgactgcataagttaacagtt
cttgcaaatggtccaggttgcatcccagctgttatcactatacaagtgtcagtaataaaa
gttattttcagacctcctgaagttgtccctcgctacatagctaatgaggtggaaggcatt
gtttacctaaaagaatcggagcctgtaagctcacccatagcattttttacagtgaaagat
ccagatgaaaagaataaggtggactgttttttggaaggagatggaccattcagattgtca
ccatataagccatatactaatgaatatttgctagaaaccacaaagcccttggattatgaa
atgcagcaatcgtatgaaatatctgtggttgcatggagtacacatgggtttcatgtaaag
acatatgttaaggtgcaggtgctagatgacaacgataactctcccattttcattcaacct
gtagtagagttatcaattgaagagaacaatgcccctaatgtttttctggccaagttatat
gcaacagatgccgacagtggggcaagaggtgaagtttcatatttcctggggcccgatgca
ccttcgtatttttctttagataaaattactggagttcttacagtctctacacggttagac
agagaagaaaaagagaagtaccggttcactgtcaaagcaaaagataatgggtctcctcca
cgagattcaatagctactgtgattctgacaatactggataaaaatgacaacagtcctaga
tttatcaacaaggatttcagtttctttgtgccagaaaactttccaggcctgggtgaaatt
ggagtaattagtgttacagatgcagatacaggaaagaatggatgggttgccctttctgtt
attaatggaagtgatatctttgtaatagatactggcaaaggactcttaagagcaaaagta
tccttggacagggaacagcaaagttcctatgtgctttgggtggaagctgttgatggaggt
gaccctgccttatcctctacggcaaaaataactatcctgcttctagatgttaatgacaac
ccacctctggtcctgtttcctcagtctaacatgtcttatctgctagtccttccttcgact
ctccctggctcccccatcactgaagtttatgctgtagataaagacacgggcatgaatgct
gttattgcatacagtattatagggagaagggggcctcgccctgaatcattccggattgac
tccaaaaccggcaatatcactttagaggaagctctgatgagacatgattatggactgtac
agattgcttgtaaaagttagtgaccatgggtatccggagcctctctactctacagttatg
gtgaatctgtttgtcaatgacaccgttagcaatgagagctacattgaaagtttgttgcgc
aaggagccggaaattaatattgaggagagagagccacagatagcaatggaacctactcag
caaagagtagaatcagcttcttgcatgccactgttagtggccctgtcagtcataagcttg
ggatgtatcattctaacaactattttgggcatttgtttctgtttaaagaaagacacaaag
catcacaggcaaaatgaaaatttggaagtacaaatgccattaaatggaaaaatagactta
catatattggaaaggaaaccaatggcaatttctaacatttga
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