Microcaecilia unicolor: 115468719
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Entry
115468719 CDS
T09142
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
muo
Microcaecilia unicolor
Pathway
muo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115468719 (CSTF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
muo03019
]
115468719 (CSTF3)
Messenger RNA biogenesis [BR:
muo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
115468719 (CSTF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
TPR_6
TPR_19
Motif
Other DBs
NCBI-GeneID:
115468719
NCBI-ProteinID:
XP_030056498
UniProt:
A0A6P7XVH2
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All DBs
Position
4:139270181..139478320
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AA seq
715 aa
AA seq
DB search
MSGEGVVDQAAEYVPEKVKKAEKKLEDNPYDLDAWSILIREAQNQPIDKARKTYDRLVSQ
FPSSGRFWKLFIEAEIKAKNYDKVEKLFQKCLMKVLHIDLWKCYLAYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NTPQEAQQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKHEKVH
SIYNRLLAIDDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDIRTRHHVYVSAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLAPEK
SGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYDGKETALLVDRYKFMDLYPCSASE
LKALGYKDVSRAKLASIIPDPVVAPSIVPTMKDELDRKPEYPKPDTNQMIPYQPRHLAPP
GMHPVPGGVFPVPPAAVVLMKLLPPPICYQGPFVQVDELMGIFRRCRMPDLDEAVRLITG
GQPELTVEGNGPLENAILNKAMKRPNEDSDEEEEKGSVLPPIHDIYRARQQKRIR
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagaaggtgttgttgaccaggctgcagagtatgttccagaaaaagtgaagaaa
gctgaaaagaaattagaagataatccatatgatcttgatgcgtggagcattctcattcga
gaggcacagaatcaacctatagacaaagcacggaagacctatgatcgtcttgtatcccag
ttccccagttctggcagattctggaaactattcattgaagcagagataaaagctaaaaat
tatgataaagtagagaagttgtttcagaaatgtcttatgaaggttttacacatagactta
tggaaatgttaccttgcctatgtacgagaaaccaaaggaaaactaccaagttacaaagaa
aaaatggctcaagcatatgactttgctttagataaaatcggcatggaaattatgtcctac
cagatatgggtggattacataaactttctgaaaggagtagaagctgtgggatcttacgca
gagaaccagcgaataacagcagttcgaagagtatatcagcgaggatgtgtaaaccctatg
atcaacattgaacaattatggagagactataacaaatatgaagagggcattaatattcat
cttgctaagaaaatgattgaagatcgcagtagagactatatgaatgctagacgcgtagcc
aaggaatatgaaactgtgatgaaaggtcttgatcgtaatgcaccctctgtacctccccaa
aataccccccaagaagctcagcaggtagaaatgtggaagaaatacatacagtgggaaaag
agtaatccactccgtacagaagaccaaactcttataacaaaaagagttatgtttgcttac
gagcaatgcctgttggttcttggacaccatccggacatctggtatgaagctgcacaatac
cttgagcaatctagtaagctgttggctgaaaaaggggatatgaacaatgctaaactattc
agtgatgaagctgctaacatttatgaaagagcaatcagcactttattgaagaagaacatg
ctgctttactttgcatacgccgattacgaggagagtcgaatgaaacatgaaaaagtgcac
agcatctacaatagattgttagccatagatgacattgatcctacactggtgtacatccag
tatatgaaatttgcaagacgtgccgaaggtatcaaatctggtagaatgatattcaaaaaa
gcaagagaggatatccgaacccgccatcatgtttatgtctctgccgcgttaatggaatac
tactgtagcaaggacaagtccgtggcttttaagatttttgagctggggttgaagaaatat
ggagatattcctgaatatgtactggcatacattgactatctgtctcaccttaatgaggac
aacaatacacgagttttgtttgaacgagttctaacgtcgggaagtttggcccctgagaaa
tctggtgaaatctgggccagattcttggcttttgaaagtaatattggtgatttggctagt
atactgaaagtggaaaagcgacggttcactgccttcaaagaggagtatgatgggaaggaa
acagctcttttggtggataggtacaaatttatggatttgtatccctgttctgcaagtgaa
cttaaagctcttggttacaaggatgtttcacgtgccaaactagcatctataattccagat
cctgttgtggccccttctatagtacccacaatgaaggatgaattagatagaaaaccagag
tatccaaagccagacacaaaccagatgatcccttatcagccaagacatctagctcctcca
ggaatgcatcctgtgccaggtggtgttttcccagttcctccagctgctgtagtgttaatg
aagcttcttcctcctcccatctgttaccagggtccttttgtgcaagtggatgaacttatg
gggattttccgaagatgtaggatgccggatttggatgaagctgtgagattgattactgga
ggccagcctgaattaacagtggaaggcaatggacctttggaaaatgccatcctcaataaa
gctatgaaaaggccaaatgaagattcagatgaggaagaagaaaaaggatcggtgcttcct
cctattcatgacatatacagagcacgacagcaaaagaggattcgatga
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