Microcaecilia unicolor: 115468957
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Entry
115468957 CDS
T09142
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1 isoform X1
KO
K10610
DNA damage-binding protein 1
Organism
muo
Microcaecilia unicolor
Pathway
muo03420
Nucleotide excision repair
muo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115468957 (DDB1)
09124 Replication and repair
03420 Nucleotide excision repair
115468957 (DDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
muo04121
]
115468957 (DDB1)
03400 DNA repair and recombination proteins [BR:
muo03400
]
115468957 (DDB1)
Ubiquitin system [BR:
muo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
115468957 (DDB1)
DNA repair and recombination proteins [BR:
muo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
115468957 (DDB1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
115468957 (DDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RIG_2nd
Beta_propel
Motif
Other DBs
NCBI-GeneID:
115468957
NCBI-ProteinID:
XP_030057004
UniProt:
A0A6P7Y2D8
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All DBs
Position
4:complement(205549179..205825546)
Genome browser
AA seq
1140 aa
AA seq
DB search
MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGENKDLLFVLTAKYNACILEYKQSGDSIDIITRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELQVIDVKFLYGCQAPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGIVNLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAYKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDSQRD
TDDMLVLSFVGQTRVLMLNGEEVEETDLAGFVDDQQTFFCGNVAHRQLIQITSASVRLVS
QEPKSLVSEWKEPSGKNISVASCNSNQVVVAVGRALYYLEIHPQELRQISCTEMEHEVAC
LDITPLGESNGMSPLCAIGLWTDISARILKLPSFELLHREMLGGEIIPRSILMTTFESSH
YLLCALGDGALFYFGLNVDSGILSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRKICYQEVSQCFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSSSKLFSSSTSPHET
SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDINTYFIVGTAMVYPEE
AEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGET
STPTQGSVLFGTVNGMIGLVTSLSEGWYNLLLDVQNRLNKVIKSVGKIEHSFWRSFHTER
KTEPATGFIDGDLIESFLDINRSKMQEVVANLQIDDGSGMKREATVDDLIKIVEELTRIH
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacaactacgtggtgacggcgcagaaacccactgccgtgaatggttgcgtcaca
ggacattttacctctgctgaggacttaaatttgctgattgcgaagaatacacgacttgag
atctacgtggttactgcagagggcctgcgtccagttaaggaggtgggaatgtatggcaag
attgctgttatggagctcttccggccaaagggggaaaacaaggacctgctgtttgttctc
actgccaagtacaatgcctgtatcctggagtacaaacaaagtggggacagtattgatatc
ataacccgtgcacatggaaatgtacaggatcgcattggtcgcccctcagaaacaggcatc
attggtatcattgatccagaatgccgtatgattggactgcgtctctatgatgggcttttc
aaggtcatcccccttgaccgggacaacaaagagttaaaagcctttaatatccgactagaa
gagctgcaggtcattgatgtgaagttcctatatggctgccaggccccaaccatctgtttt
gtctaccaggatcctcagggccgccatgtgaagacttatgaagtgtccctgcgagagaag
gagtttaacaaaggcccgtggaaacaggagaatgttgaggctgaggcatcaatggttatt
gcagtccctgagccttttggaggtgcaatcatcattggtcaagaatctattacttatcac
aatggtgataaatatctggcaatagctccacccattatcaagcaaagtactattgtgtgc
cacaaccgagtagatcccaatggttctcgctatctgttgggggacatggaagggcgtctc
tttatgctgctgctggagaaggaagagcagatggatgggattgtcaacttaaaggacctg
agagtggagctgcttggggagacttccattgcagagtgcctgacatacctggataatgga
gtggtctttgttggatctcgtcttggcgattcacagcttgtaaagttgaatgtggacagc
aatgagcagggctcttatgtggttgccatggagacttttactaatctaggccccatcgtg
gacatgtgtgtggtcgatctggagagacaagggcaaggccagttggtcacttgttcaggt
gcatataaggaggggtccctgaggatcatccggaatggtatcgggattcatgaacatgcc
agcattgacctgcccgggattaaaggcttatggcccctaaggtctgactctcaacgagat
accgatgacatgctggtattgtccttcgtggggcagactagagttctaatgttgaatggt
gaagaagtggaggaaactgatctagcaggttttgtagatgaccagcaaaccttcttttgt
ggaaatgtagcccatcgccagctaattcaaattacatctgcgtctgttcgactggttagt
caggagcccaagtctctggttagtgagtggaaggaacccagtggcaaaaacatcagtgtg
gcctcttgcaacagtaaccaggtggtggtggctgtgggaagggctctctactacctggaa
atccatccccaggagctgagacagatcagctgcacagaaatggagcacgaagtggcctgc
ctggatatcacacctctaggggagagtaatgggatgtcccctctctgtgctattggcctc
tggactgatatctctgcgcgaatcctgaagctaccatcttttgagttgttacacagggag
atgctgggaggagagattatcccccgctccattctgatgaccacatttgagagcagccat
tacctgctctgtgctctgggagatggagccctcttctactttggactgaatgtagactca
gggattctaagtgatcggaaaaaggtaacacttggcacacagcccactgtccttaggacc
tttcggtctctgtccaccactaatgtctttgcctgctcggatcgacccacagttatctat
agcagtaaccacaaactggtcttctcaaatgtcaatctgaaggaggtgaactatatgtgc
cctcttaactcagatggataccctgacagcctggcgttggctaacaatagcactctgacc
attggcactattgatgagatccagaaactgcacattcgcactgtcccattgtatgagtct
cccaggaagatttgttaccaggaggtgtctcagtgttttggggtgctttcaagtcgcatc
gaagtgcaggatgcaagtggaggaaccactgctttgagacctagtgctagtactcaggct
ctttccagcagtgtgagttccagtaagctgttctctagtagtacgtccccacatgagaca
tcttttggagaggaggtagaggttcacaacctgctcattatagaccaacacacctttgaa
gtgctccatgcccatcagtttctgcaaaatgagtatgcactgagcctagtgtcctgcaag
cttggaaaagatatcaacacttacttcattgtgggcacagcgatggtatacccagaggag
gcagagcctaagcagggccgcattgttgtctttcagtattctgatgggaaactccagaca
gttgctgagaaggaagtgaaaggtgctgtttattctatggtagaatttaatgggaagctc
ctggccagtatcaacagcacggttcgattgtatgagtggacggcagaaaaggagttgcgc
actgaatgtaaccattacaataacatcatggctttatatctgaaaacaaagggagatttt
atcctggtgggagacctaatgcgctcggtattgctgcttgcctacaaacccatggagggc
aactttgaggagattgctcgggattttaacccaaactggatgagtgctgtggagatactt
gatgatgacaattttctcggagcagaaaatgcctttaacctctttgtgtgtcagaaggac
agtgcagctacgacggatgaggaacgacaacaccttcaggaagtgggtctgtttcacctg
ggcgagtttgtgaatgtattctgtcatggttcacttgtcatgcagaatctgggcgaaact
tctacacccacccagggctcagtgctgttcggaacagtgaatggaatgattggtttggtt
acctcattgtcagagggctggtacaacctattgttagatgtgcagaaccgacttaacaaa
gtcatcaagagtgtgggcaagatcgaacactctttctggagatcatttcatacagagcga
aagactgaacctgctacagggttcattgatggtgatttgattgagagcttcctggacatt
aaccgctccaaaatgcaggaggtggtagcaaatttacagattgacgatggcagtggaatg
aagagagaggcaactgtagatgacctaataaagattgtggaggaactcactaggattcat
taa
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