Microcaecilia unicolor: 115469126
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Entry
115469126 CDS
T09142
Symbol
TGFBRAP1
Name
(RefSeq) LOW QUALITY PROTEIN: transforming growth factor-beta receptor-associated protein 1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
muo
Microcaecilia unicolor
Pathway
muo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
115469126 (TGFBRAP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
muo04131
]
115469126 (TGFBRAP1)
Membrane trafficking [BR:
muo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
115469126 (TGFBRAP1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR_Vps41
Beta-prop_WDR19_2nd
FNIP_C
Motif
Other DBs
NCBI-GeneID:
115469126
NCBI-ProteinID:
XP_030057315
UniProt:
A0A6P7Y2U2
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Position
4:complement(259146342..259250871)
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AA seq
865 aa
AA seq
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MSVQAFRLVCAVDRELLPQVDKAAARIECLECCGHNLYLGTSDGFIHHLLLEERSGVMPG
HCTFSASRQLQRQVGAKKPVNELRAASALNRLLVLCDGIISLVHMQNLEPVPSGARIKGA
VTFTLNENPLSGDPFCVEVCIVSVKRRTIQLFHVYEDRVQILKEVSTPEQPFAVAIDGHF
LCLALTTQYIILNYNTGASQDLFPYSSEEKRPIVKRIGRQEFLLAGPGGLGMFATVAGIS
QRAPVHWSENVIGAAVCFPYVVALDAEFITVHSMLDQQQKQTLPFKDGHILQDFEGRVIV
ATSNGVYILTPLPLEKQIQDLLSSHRVEEALVLAKGARRNIPKEKFQVMYRRILQQAGFI
HFAQLRFPEAKELFRSGRLDVRELISLYPFLMPSSATFTRAHPPLHEYADLNHLTQGDQE
KMTRCKRFLMSYLNEIRSTEVANGYKEDIDTALLKLYAEASHESLLDLLVSENSCIVADS
ATWLEKHKKYFALGLLYRYHGQDAPALQLWRKXXMESLKTTTRPDLFEYLVDFLTFCTDQ
ELVWKYADWVLQKNEQVGVHIFIKRPLEEQQKNNFHPDDVIRCLHRYPKALFQYLEYIVL
DHGLQKEKYHTHLAVLYLEEVLRLKVVVKGDCMELAELQKKFQHLLQQSDLYRVHLLLDK
IKDSDLLLEQAILYGKLEDHEKALNILVWQLKDFPAAENYCLWNSESKDPSYKQRLFHQL
LSVYLHSDRPDESLLTAAVDLLNHHAAEFDATQVLRQVPDTWSAQLLSQFLVGAMRESVH
RKRMSQLMLGLAKTENIIYQYEKLKATESPIVLSDKKLCQVCRDPFHEPAFVRYPNGSLV
HTHCAASRHTNTSSTYHLSSPSRRT
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgcaagctttccggttggtgtgtgctgtggaccgagagctgttgccacaggtg
gacaaggctgcagcccgcattgagtgcctggaatgctgtggccataatctctacctgggt
accagtgatggctttatccaccatctgctgctggaagagcgcagtggggtcatgccaggc
cactgtactttttctgcctcccgccagcttcaacgtcaagtgggagccaagaagccagtg
aatgagttgcgggctgcctcggcactgaatcggttgctggtgctgtgtgatggtataatc
tccttggtgcatatgcagaacttggagcctgtgcccagcggggcccgtatcaaaggtgct
gtcacattcactctgaatgagaaccccctcagtggagaccccttctgtgtggaagtgtgc
attgtgtctgtgaagcgccgcaccattcagctctttcatgtctatgaagatcgtgtgcag
atcctgaaggaggtttcaaccccagaacagccttttgctgtagccattgatggccacttt
ctctgtctggcactcacaactcagtatattattttaaactacaacacaggtgcctcgcag
gatctgttcccctacagtagtgaggagaagcggcccatcgtcaaacgcataggcaggcaa
gagttcctgctggcagggcctggaggcttaggtatgtttgcaacagtggcagggatttcc
cagcgtgctcctgttcactggtcagagaatgtgattggagccgctgtttgtttcccttat
gtcgtagcactagatgcagagtttattaccgtacacagcatgttggaccagcagcaaaaa
cagacactaccttttaaagatggccacatcttgcaggactttgaaggaagagtaattgta
gctaccagtaatggagtgtacatcttgactccattacctttggaaaaacagattcaagac
cttctaagcagtcacagagtggaagaagctttagtcttggcgaagggagcgcgaaggaac
attccaaaagagaaatttcaggtaatgtacagaagaatcctgcaacaggcaggatttata
cactttgcacagcttcgctttccagaagctaaagaactcttcagaagcggccgactggat
gtccgggagctgatctccctctaccctttccttatgccttcgtcggccacattcacccga
gcgcacccgcctctccacgagtatgcagacttgaaccacctgacacagggggaccaggaa
aagatgacccgatgcaaacgcttcctgatgagttacttgaatgaaattcgcagcactgaa
gtggcaaatggctataaggaagacattgacactgctctgctgaagctatatgcggaagca
agccatgaaagcctgctggatcttctggtctctgagaattcctgcattgtagcagacagt
gccacgtggctggagaaacacaaaaagtattttgcacttgggcttttgtatcgctaccat
ggccaagatgctcctgcactacagttatggcgaaaatagtaaatggagagcttgaagaca
accacccgtcctgacctctttgagtacttagtggatttcctgactttctgcacagatcag
gagctggtgtggaagtatgctgactgggttttgcagaaaaatgaacaggttggggttcat
atttttattaaaaggcctttggaagagcagcagaaaaacaactttcaccccgatgatgtc
atcagatgtcttcacagataccccaaagcgttgtttcaatatctggaatatatagtcctt
gatcatgggctccagaaagaaaaatatcatacacatttagctgtgttgtacctggaagag
gtccttcggctaaaagttgtggtcaagggggactgcatggaactggctgaattacagaag
aagttccaacatctgcttcaacagtctgacctttatcgtgttcacctcctgttagataaa
atcaaagattcagatcttcttctggaacaagccatattgtatggaaaattagaagatcac
gaaaaagctcttaacatcttggtctggcagctgaaggactttcctgctgcggaaaactac
tgcctatggaactctgagagcaaggaccccagctacaagcagcggctcttccaccagctg
ctctccgtatacctgcactcagacaggcccgacgagtcgctgctgacagctgctgtggat
ctcttaaatcatcatgctgcagagtttgatgccactcaagtgttgcggcaggttcccgat
acatggtctgcacagctgctttcccagttcctggttggagccatgagggagagtgttcat
aggaagagaatgagccagctcatgctggggctagcaaaaactgaaaacatcatctatcag
tatgaaaagctaaaagccacggaaagtccaattgtgctgtcggacaagaagctctgccag
gtgtgccgggaccctttccacgagcctgcgtttgtcaggtacccaaacggcagcctcgtg
cacactcactgtgccgcaagccgacatacaaacactagctcaacctatcacctatccagt
cccagtagaaggacttga
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