Microcaecilia unicolor: 115469176
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Entry
115469176 CDS
T09142
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
muo
Microcaecilia unicolor
Pathway
muo04382
Cornified envelope formation
muo04510
Focal adhesion
muo04512
ECM-receptor interaction
muo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115469176 (COL4A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115469176 (COL4A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
115469176 (COL4A1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
115469176 (COL4A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
muo04147
]
115469176 (COL4A1)
00536 Glycosaminoglycan binding proteins [BR:
muo00536
]
115469176 (COL4A1)
Exosome [BR:
muo04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
115469176 (COL4A1)
Glycosaminoglycan binding proteins [BR:
muo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
115469176 (COL4A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
115469176
NCBI-ProteinID:
XP_030057424
UniProt:
A0A6P7Y3K5
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All DBs
Position
4:271553375..271916484
Genome browser
AA seq
1675 aa
AA seq
DB search
MGPGQGFWLLLIVFLSAQTHQSAEAAACVGCGGKCDCSGVKGAKGEKGIHGLQGVIGFPG
MQGPEGPQGPIGMKGDTGEPGLPGTKGTRGPPGSPGFPGNPGLPGIPGLDGPAGPPGIPG
CNGTKGDRGPLGPPGLPGLSGNPGTSGFPGPKGDPGEMIGLLPSGLLKGEKGYAGHPGLP
GSPGLPGLQGPIGPAGQTGPPGPPGPPGPPGTKGQMGLGFRGPKGDKGEQGVSGPPGPQG
PVAQGSKGVIVYREKGEKGDKGEAGDHGAPGFPGASIKGEKGEAGKPGPRGKLGKDGEKG
EDGFDGPPGERGFPGTPGHYGLKGDKGEIGPQGPPGIVVRDGLEEIIGEKGDPGSPGFPG
IKGEQGLKGLQGLQGYPGPPGLSSPGRDGAPGFPGERGIKGEQGTPGLPLQGSKGRDGFP
GPPGFPGPPGTIDETSECLPGAPGDRGLPGQQGQQGFQGERGQKGDKGNHCAVCDPGVVG
LPGEPGPQGPPGDPGFPGAPGSKGEPGSPGFNGLIGAPGSKGVPGLIGRPGAKGEPGEVF
FEPKLKGDRGASGLPGTRGLPGEEGKPGRDGQPGRPGPEGVAGTPGPKGDQGSHGENGFP
GIRGERGPPGLPGIGHTGAAGDKGTQGFPGNSGLPGSPGSKGEPGRTILETGPPGPRGSP
GIPGLAGDQGETGVPGLSGRPGLLGEKGDRGLPGVGFPGPPGPKGHQGLPGASGHPGVKG
STGFDGIPGLPGLVGEKGEPGVGFPGPTGLPGPQGPAGAPGAKGNQGEPGVPGEQGFPGG
HGQFGAKGDPGRVGVPGLQGAPGVPGIGPQGSPGTPGTQGPPGLTGLTGSKGEKGFPGIP
GLDMPGSKGEKGIHGLTGNTGMPGLPGPPGPPGKEGLPGFQGLKGEMGVMGTPGEPGVTG
PIGTSGLPGEKGNPGSPGFPGGTGSPGYKGDKGEAGLPGPPGSMTDVDMGKMKGQKGELG
DKGDVGLIGEKGFQGQPGSPGMPGSDGEKGLPGREGPKGDLGSPGSPGLPGFPGPKGSMG
EMGLPGTPGEKGVPGVSGTPGVTGLPGSKGEKGIKGDQGVPGIGFPGLPGEKGAPGEEGP
RGDSGERGYKGDVGIPGFPGSPGVKGTVGAPGFQGSPGLPGEKGVKGFPGTDGTEGAKGQ
PGEPGLSGLPGLIGEKGERGYDGISGTPGEKGDPGIPGRGLPGHQGLKGDKGIKGDVGFP
GSPGIPGVSGIKGEQGEHGPQGPQGPAGFPGVPGIAVEGPKGDSGPHGPPGFPGLPGREG
LPGLPGQEGSKGIKGDRGWPGSPGGPGGKGDSGFQGIPGESGLPGSSGPKGEHGQPGVPG
FVGPKGTFGLPGSKGEQGDQGFPGPKGIQGPPGPTGVLQIIKGEPGLPGLEGPVGPLGPP
GFPGPKGQQGITGSVGLPGQPGSPGFDGTTGLKGDIGPTGPPGPRGFPGPPGPEGLPGPN
GSPGPSSMAHGFLVTRHSQTIEEPICPFGTKRIYTGYSLLYVQGNERSHGQDLGGAGSCL
RKFSTMPFLFCNLNNVCNFASRNDYSYWLSTPEPMPMSMAPITGDSIKPFISRCSVCEAP
AVVMAVHSQTIQIPQCPDGWISLWIGYSFVMQTSAGAEGSGQALASPGSCLEEFRSVPFI
ECHGRGTCNYYANAYSFWLATIDRNEMFKKPVPSTLKAGDLRTHVSRCQVCMRRT
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atgggtccggggcagggcttttggctgcttctgatcgtgttcctctctgcccaaacccac
cagagcgctgaggcagcggcatgcgtgggatgtggaggtaaatgtgactgcagtggggta
aaaggagcaaagggtgaaaagggcattcatggattacagggagtcattggttttcctgga
atgcaaggacctgaagggcctcaaggaccaattggaatgaagggtgacactggtgaacca
ggattaccggggaccaaaggaacaagaggtccaccaggttcaccaggatttccaggaaac
ccaggccttccaggcattcctggcctagacggtccagcaggtccacctggtatcccagga
tgcaacggtacaaagggtgacagaggtccccttggtcctcctggtttaccaggattgtct
ggaaatccaggaacatcaggatttccaggaccgaagggtgacccaggtgaaatgatcgga
cttctaccatctggtttattaaaaggagaaaaaggctatgcgggccatcctggattacca
ggttcaccaggattgccaggtttacaaggtcccataggtcctgctgggcaaacaggacct
cctggtcctcctgggccacctggtcccccaggtacaaagggtcaaatgggtttgggcttt
cgaggaccaaagggtgataagggagaacaaggggtttcggggcctcctggtccacaaggc
cctgtcgcacaaggttcgaaaggagttattgtatatagagaaaagggtgaaaagggtgat
aaaggtgaagcaggtgaccatggtgctccaggatttccaggggcaagtatcaaaggagaa
aagggtgaagctggaaagccaggaccacggggaaaacttggcaaagatggggaaaaggga
gaagatggatttgatggtccacctggtgaacgagggtttccaggaacaccaggccactat
ggtttgaagggagacaagggtgaaataggtcctcaaggacctccaggaattgtagtgcgt
gatggattagaagaaatcattggtgaaaaaggagatcctggctctcctggttttccagga
ataaagggtgaacaaggtctaaaaggtcttcagggattacagggatatccaggtcctcca
gggttatctagtcctgggcgtgatggtgcacctggatttcctggcgaaaggggtataaag
ggtgaacagggtacacctggattacctttacaaggatcgaagggacgagacggtttccca
ggccctcctggattcccaggacctccaggcactatagatgaaacctcagaatgcctgcct
ggagcaccaggtgatcgtggtttaccggggcagcaaggacaacaaggatttcaaggagag
agggggcaaaaaggtgacaaaggaaatcactgtgccgtatgtgatccaggtgtggtggga
cttcctggagaaccagggccacaaggacctccaggggacccaggctttcctggagcaccg
ggtagcaaaggggagccaggttcacctggttttaatgggctgataggagcacctgggtca
aaaggtgtaccaggactgatcggtcgcccaggagccaaaggagaacctggagaagttttc
tttgaacctaaattgaaaggtgatagaggggcttctggtcttccgggaactcgaggcctt
ccaggagaggagggaaaaccgggacgtgatggccagccaggtcgtccaggccctgaaggt
gtagcgggcaccccaggtccaaagggcgatcaaggttctcatggagaaaatgggtttcca
ggaatacgtggagaacgggggcctcctggtctcccaggaattgggcatactggtgcagct
ggtgacaaaggaactcaaggctttccaggaaattcaggactgcctggctctccaggatca
aaaggtgaaccagggagaaccattctagaaacgggaccaccaggaccaaggggatctcca
ggaattcctggtttagcaggcgaccaaggtgagacaggtgttccaggactttcaggaaga
ccgggacttcttggagaaaagggtgaccgtggcttgccaggagttggatttcccggacct
cctgggcctaaaggtcatcaaggtttaccaggtgcctctggacatcctggtgtaaagggg
tctacagggtttgatgggatcccaggattaccaggtttagtaggtgaaaaaggtgaacct
ggagtaggttttccaggtcctacaggactcccaggtccacaaggtccagctggagcccca
ggagcaaaaggaaatcaaggagaacccggtgtacctggagagcaaggcttcccaggtggt
catggtcaatttggtgccaaaggagatccaggtcgtgttggagtaccaggtctacagggt
gccccaggggtgcctgggataggccctcagggctcacctggaactcctggaacacaaggt
ccaccgggtttaacaggacttacaggatccaaaggagaaaaaggtttcccaggtatccca
ggattagacatgccaggatcaaaaggagaaaagggtatccatggcttaactggaaataca
ggaatgccaggcttgcctgggccaccggggccaccaggaaaagaaggccttccaggtttt
caaggactaaagggagaaatgggagttatgggaactccaggggaaccaggtgtcacggga
cccataggaacttctggacttccaggggaaaaaggtaatccaggttcacctggattccct
ggaggaactggatctcctggctacaaaggagacaaaggtgaagcgggtctaccaggtcca
ccaggatcaatgacagatgtagacatgggaaaaatgaaaggtcagaagggtgaattaggc
gataaaggtgacgtcggattaattggtgaaaaaggatttcaaggacaacctggtagtcct
ggaatgccaggaagcgatggtgaaaaaggattgccaggccgtgaaggacccaaaggtgac
ctgggttctccaggatctccaggattgccaggatttccagggccaaaaggatcaatgggt
gaaatgggtttgccaggtacccctggagagaaaggtgtaccaggtgtatcaggcactcca
ggtgttacaggccttccaggatcaaaaggtgaaaaggggataaagggagatcagggtgta
cccggcattggctttccagggcttcctggtgaaaagggtgcgccaggagaagagggtccc
cgaggtgattctggagagagaggttacaaaggtgatgttgggattccaggatttccaggt
tctcctggtgttaaagggactgttggagctccagggtttcaaggtagcccaggacttcca
ggagaaaaaggcgtcaagggtttccctggcacggatggcactgaaggagcaaaaggacaa
ccaggtgagcctggcttgtcaggactacctggcctcattggtgaaaagggtgagcgaggt
tatgatggaatctctgggacacctggtgagaagggggatccaggtattcctgggcgagga
cttccaggacatcaagggctaaagggagacaaaggtataaaaggagatgtgggtttccca
gggtccccgggaataccaggtgtttctggaatcaaaggagaacaaggcgaacacggtcca
cagggtcctcaaggacctgccggtttccctggagtaccaggcattgcagtggaaggtccg
aaaggagactctggcccacatggtccaccagggtttccaggtctcccaggccgtgaagga
ttaccaggtcttccaggccaagaaggttctaaaggtattaaaggagacagaggttggcct
gggtcccctggaggtccaggaggtaaaggtgactcagggtttcaaggaattccaggtgaa
tcaggattaccaggttcttctggtcctaagggtgaacatggacaaccaggagttccagga
tttgtagggcctaaaggtacctttgggctcccagggtctaaaggagaacagggagatcaa
ggttttcctggacctaaaggtatacaaggtccacctggtcccactggtgttcttcagatt
attaaaggagagcctggtttacctggcttagagggcccagtgggtcctttaggacccccg
gggtttccaggtccaaaaggacagcaaggtataactggatctgtaggtttacctggacaa
ccaggtagcccagggtttgatggcacaactggtctaaaaggagatattggtcccactggt
ccaccaggtccaagaggatttccaggtccaccaggcccagaaggtttacctggaccaaac
ggttctccaggaccatcatcaatggctcatggattccttgtcacaagacacagtcagacc
atagaggagcctatttgcccttttgggacaaagagaatttacactgggtattctttgctg
tatgtacaaggcaatgagaggtcacatggtcaagacttgggtggtgcagggagctgtctt
cgcaaatttagtaccatgccattcttgttttgtaacctcaacaatgtatgcaactttgca
tcaaggaatgactattcttactggctgtctactcctgaacctatgccaatgagtatggct
ccaattactggggacagtattaagcctttcattagtagatgctctgtttgtgaggctcct
gctgtagtgatggcagttcacagccagacaattcagatcccacagtgcccagatgggtgg
atatctctttggattggctactcatttgtcatgcaaaccagtgctggagctgagggctct
gggcaagctcttgcatctcctggatcctgcctagaggaattccgtagtgtcccattcatt
gaatgtcatggccgcgggacttgtaattattatgccaatgcgtacagcttctggcttgcc
actatagacaggaatgaaatgttcaagaaacctgttccttccactctgaaagcaggggac
ctgcgcactcacgtcagccgatgccaagtctgtatgagaaggacatga
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