Microcaecilia unicolor: 115469462
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Entry
115469462 CDS
T09142
Symbol
SCAF4
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
muo
Microcaecilia unicolor
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
muo03021
]
115469462 (SCAF4)
03041 Spliceosome [BR:
muo03041
]
115469462 (SCAF4)
Transcription machinery [BR:
muo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
115469462 (SCAF4)
Spliceosome [BR:
muo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
115469462 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
115469462
NCBI-ProteinID:
XP_030057994
UniProt:
A0A6P7Y5G4
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All DBs
Position
4:complement(340373438..340687563)
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AA seq
1316 aa
AA seq
DB search
MDAVNAFNQELFSLMEMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEFKV
AGLYVIDSIVRQSRHQFGIDKDVFGPRFTKNITVTFQCLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGASVTVPVPETSNSEVCETSHLDHQMPVAEPNVMCNEGSPPPPS
NIQVEPPEMDANSIPTASQLPNSDAFAAVAQLFQTTQGQQQTDSTQLHQILQTFQQPPKP
PSPVLDDDVLAQVQAITAQLKTTTSQPPEQKMAFDKKLLDRFDYDDEPDTADDIKKEVST
PPPAPSQPPFGFSGDGMPPPVYPQLPAQLPNMDQYPQGMMGIPPDPLLNQAPLPPNGQMA
GFGLLPTPPYPPMVPPMVAPALPVPQPFQAPFPAQNETQIQKVHQQQEMSMEVEQPSVQE
VKHVSDGKKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSHERRER
EKERERRQKGLPPMKSEIVSVCSTTLWVGQLDKRTTQQDVGSLLEEFGPIESINMIPPRG
CAYIVMVNRQDAFRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELGVTYVPW
DKIKPEELESFCEGGVLDNETLSPEWKVIPKKPEKKEVTQNGGAENAHPEEAPPVPLPLQ
IPVPVPVPLHAPMPGPMPTHPPGPPIGALQPPPAFSPHLSMPPPGFAPGVPPPPPPPFMR
PGFNPLHLPPGFLPPGPPPLLAPPVSLPLTPGINIPTATSTNVTDSTSKDMSLGSPIPIV
VTGPRGNAESGDSMKMFGSGPPPVGLGGHPGPGGHPGPGGHPGPGGHPGPANHPGPGGHP
GPGGHPGPANHPGPTGHPGPGGHLGPTGHPGPANHPGPGGHPGPSNHPGPGGHPGPSNHP
GPGGHPGPGSHPGPANHPGPGGHPGPGGHPGPANHPGPGGHPGPANHPGPGGHPGPGGHP
GPANHPGPGGHPAPVNPPVPLLGTHPQSGGAPNSVPGLQPPSTGLLGARPGLIPLQRPPG
VPPPHLQRFPLMPPRSMPPHMGHRGPPPGPGGYGMPPPHGMRGPFPPHGHFVRPGGSGGP
GGSGGPEEREGRQFRNERQMFNPGRDHERFGRRPFGNRIENDRERFGNRHDERDDRFSNR
HDERDDRFGNRHDERDDRFGNRHDERDDRFGNRHDERDDRFGNRHDERDHDWPGGCERRE
WGGRTPERDRHWDTEERNRRFSGYRDRNQEPRDRETQREKEENRGKEKPEVTGGENSEKN
HESPRGRVGNTDIASELNKRESESKAPKPTEESPSVATSAAKHPEKDSGSFVEAPR
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atggatgcggtcaacgctttcaaccaggagctcttctctcttatggaaatgaagcctcct
atttctcgtgcaaaaatgattctaattactaaagctgccatcaaagctattaagctttac
aagcatgttgtccaaattgtggagaagtttatcaagaagtgcaaaccagaattcaaagtt
gcaggattatatgttattgactccattgttcgtcagtctcgtcatcaatttggaatagac
aaggatgtttttgggccaagattcacaaaaaatattaccgtcacattccagtgtttatat
ctctgtccttctgaagacaagagtaaaatagttcgcgtcctgaatctttggcagaaaaat
ggagttttcaaaatcgaaatcattcagcctcttctggacatggcagcaggagctagtgtc
actgtccctgtaccagagacctcaaacagtgaagtttgtgagacctctcatttagaccac
cagatgcctgttgctgaacccaatgtaatgtgtaatgaaggttcaccaccaccaccatca
aatattcaagttgagccacctgaaatggatgctaattcgatacctactgcatcacagcta
cctaattctgatgcatttgcagctgtagcccagctgtttcagacaacacaaggacaacag
caaactgactcgacacagctccatcagattcttcagacttttcagcagccacccaagcct
ccatccccagttcttgatgatgatgtgctagcacaagttcaagctatcactgctcagttg
aagactaccacatcacaaccaccagagcagaaaatggcttttgataagaagctgttggac
agatttgactatgatgatgaacctgatacagccgatgatataaagaaggaagtttcaaca
cctcctccagccccctctcaacctccatttgggttttctggagatggcatgcccccacct
gtatatccacagctacctgctcagctcccaaatatggatcagtatcctcaaggaatgatg
ggtatcccaccagatccattgcttaatcaggctcctcttcctcctaatggacaaatggct
gggtttggccttctgcccaccccaccgtacccacccatggtgccaccaatggtagctcca
gctctacctgttccacaacctttccaagcgcccttcccagctcagaatgagacacagatc
cagaaagtgcatcagcaacaggaaatgtcaatggaagttgaacaaccatccgttcaggaa
gtgaaacatgtttctgatggcaagaaatccagatccagatctgcatctagatcaccaaaa
agaagaagatctagatctggttccaggtctcgaaggtcacgtcacagacgctctcgttca
cgatcacgtgacaggcgccggcactcgccaaggtcaaggtcgcatgaacgccgtgaacga
gagaaagagagagagcgcaggcaaaaaggtcttcctccaatgaaatctgaaattgttagt
gtttgtagtactacattgtgggtgggacagctggacaaaagaacaactcagcaggatgtt
ggaagcctcttagaagagttcggtccaattgaatcaattaatatgatccctcccagaggc
tgtgcctatattgttatggtgaatagacaggatgctttccgtgcattacagaaattgagc
cgtggaaactacaaagtaaaccagaaatctataaagattgcttgggctttaaataaagga
ataaaggcagactacaaacagtactgggatgtggagctgggtgttacctatgtaccatgg
gacaaaattaagcctgaagaactggaaagcttttgtgaaggaggcgtgttggacaacgag
acccttagtccagaatggaaagtaattcctaagaaacctgagaaaaaagaagtaactcag
aatggaggagcagaaaatgcacaccctgaagaagcacctccagtaccacttcctttacag
atcccagtcccggttcctgttcctctccatgcccccatgcctggaccgatgccaacacat
ccacccggtcctccaattggtgctcttcaaccaccacctgcattctcacctcatttaagt
atgccacctccaggttttgcacctggtgttcctcctccacccccaccaccattcatgaga
cctggatttaacccactccatttaccaccaggctttctacctcctggtcctcctcctctt
ttagcaccaccagtatctcttcctcttactccaggaataaacatcccaactgctacttca
actaatgtgactgacagtacttcaaaagacatgtctttggggagtcccattccaatagta
gtaactggacccagagggaatgctgaatctggagacagtatgaaaatgtttggatccgga
ccgccacctgttggtcttggcggtcatcctgggcctggcggtcatcctgggcctggcggt
caccctgggcctggcggtcaccctggtcctgctaatcaccctgggcccggtggtcaccct
gggccaggcggtcatcctgggcccgctaaccatcctgggcccactggtcatcctgggccg
ggcggtcatcttgggcccactggtcatccagggcctgctaatcatcctgggccaggtggt
catcctggaccctctaatcatcctgggccaggcggtcatcctggaccctctaatcatcct
gggccaggcggacatcctgggccaggcagtcatcctggacctgctaatcatcctggtccc
ggcggtcatcctgggccgggcggtcatcctggtcccgctaatcatcctggtcccggcggt
catcctggtcccgctaatcatcctggaccgggcggtcatcctggtcccggcggtcatcct
ggtcccgctaatcatcctggtcctggcggtcatcctgctcctgtaaacccacctgttcca
cttcttggtacacatcctcaatcaggtggtgcacctaattctgtgcctgggttgcagcca
ccatcaactggtcttctgggtgcacgacctggattaataccactccaacgacctccagga
gttccaccacctcatctacaaagatttcccttaatgcctccccggtctatgcctccccat
atgggtcacagaggtccaccgccaggaccaggaggctatggaatgccgccgcctcatgga
atgagaggcccatttccaccacatggtcattttgttagaccaggtggatcaggaggaccc
ggaggttcaggtgggcctgaagagagagaaggaaggcagttcaggaatgagaggcagatg
tttaatcccggtagagaccacgaaagatttggaagaaggccttttggaaatcggattgaa
aatgatcgtgaacgctttggtaatcgacatgatgagagagatgaccgttttagtaatcga
catgatgagagagatgaccgctttggtaatcgacacgatgagagagatgaccgctttggt
aatcgacacgatgagagagatgaccgctttggtaatcgacacgatgagagagatgaccgc
tttggtaatcgacatgatgagagagatcatgattggcctggtgggtgcgagaggagggaa
tggggaggaagaaccccggaacgggacagacactgggacactgaggagagaaatagacgg
ttcagtggctatcgagatagaaatcaggagcctagagatagagagacacagagagaaaaa
gaagaaaatcgaggaaaagaaaagcctgaagtaacaggtggcgaaaatagtgagaaaaac
catgaatctcctagaggtagagtaggaaatacagacattgcttcagaacttaataaaagg
gagtctgaatcaaaggctccaaaaccaactgaagaatcaccatctgtggctacctcagct
gccaagcatccagagaaggattctggttcgtttgtggaggctcctcgctaa
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