Microcaecilia unicolor: 115469976
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Entry
115469976 CDS
T09142
Symbol
COL17A1
Name
(RefSeq) collagen alpha-1(XVII) chain isoform X1
KO
K07603
collagen type XVII alpha
Organism
muo
Microcaecilia unicolor
Pathway
muo04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
115469976 (COL17A1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
115469976
NCBI-ProteinID:
XP_030058645
UniProt:
A0A6P7Y6A0
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Position
5:37179507..37348972
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AA seq
1431 aa
AA seq
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MDSVTKKGSRNGLITTGRETVITTRLTSLPPKGGNSSGAKVSSHSGGSGMEKKVVTHGSS
YITTSSNSRLQVGSSGSKRAPSPSSTLSVSPSSTFDRKTYTSISHHAAYEGSSSGNSSPE
YPRKEFASSSTRGRTQSRESEIRVRLQSASPSTRWTELDDVKRLVKGGRSTSLSPTRSPS
NTLPIPKKATVETKIVTEGSQSASGTYDTTILDAALPSYMWTSTLPIGSSVSGYHNNMTH
SSSLLNANTQSTGSVFAFPNNLAPSHPTLNSGLNTSSTVFGVQNNLTPSSGLISSNTVTA
SSAAYGVKKNVPPCSHSTGVLSSTISTSAANTGTTRSDDILMKDYKFLLLEKENAPPKKE
SDILIMSKDSGKVFTASTTGISTSLGEDTLKKEKQIIISNGDSYLKSEANGGLKVTKDKA
TYAEIHKDYGAGGGGGGIGAAPAWCPCGSCCSWWKWLLGLLLAWLLLLGLLFGLIALAEE
VKALKSRVTELESLSHTNRLTSVDINGLNLAKSERIHDLKHRTEINTLDADFHGQTRENL
WLYIRDRMRTDKDLAYFKGERGEPGQKGDMGIQGSKGDRGLPGPSGPQGLLGHTGPEGPK
GTKGSTGESGMEGPMGQRGREGPPGPRGEPGPSGFGEKGDRGPTGEPGLPGSPGVPGSVG
PKGNSGSAGPQGIPGSPGIQGFRGEAGLPGPKGDKGTMGAPGPKGDHGDKGSRGLTGEPG
ARGLPGPIGEAGVKGSAGAPGPDGRQGLRGETGLMGLAGPRGPPGPAGDAGLAGIPGLQG
PPGLRGEPGRPGAKGDTGSAGRVISAEGLSSFNIPGPPGPPGPTGPEGPPGVPGSIGPAG
LPGQPGQKGARGEAGEAVYVTRTESSRSERVGNAEAQAGYTGAQAGPPGPPGPPGPPGAS
IQGPPGPPGIPGEGRQGPPGPPGSFVPTSETFFAGPPGPPGPPGPKGDQGERGRQGFQGE
PGQPGLPGVTGREGQIVIGPMGPPGNPGLPGPQGPPGERGEAGVPGAPGIPGAARVSGSG
SVSSSGSWTQGPPGPPGPPGPPGAAGRSSQEIQQFIAEYLQSIGYASGLPGPLRPAGASG
ISDEIILLLQRDDVRQYLIGPPGPPGPSGGGSVSLDYSELASRLMTYMSNSGISIGVPGP
PGSPGLPGLSYGDITALLQTSEFSRIVGPPGPPGQPGHPGSPGPVGPPGPLSSSQVGFSV
EQMAAYLERAGYVGGIQGPPGPPGPQGPPGNSGLVSYAENIQSDRFRTELIEYLSSDSVR
RYISGPPGPQGPPGPKGDSGILSSSSSLSSSSSSSLSSSSTSSSSLASMLDYSEISTRVV
ENIQNQGLLQDVTYTVQGIPGLPGPPGPPGRPGVSRVFAAYGNVTEDLMDFFRTYGTIPG
TPGIPGQKGERGFPGPKGEIGLQGFPGPQGPRGQKGEQAIIGRRKRRSTGL
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgtaaccaaaaaaggcagtcgaaacggtttgatcaccactggaagagagact
gtcatcacaacaagactgacatcgttaccaccaaaaggaggaaacagcagtggggccaag
gtatcatcacatagcggagggagtggaatggaaaagaaggttgtaactcatgggagcagc
tacatcaccacaagtagcaattcaagattacaagtagggtcctcgggctcaaagcgggct
ccatctcccagctctacgctctctgtttcacctagctcaacatttgacaggaaaacctat
acctccatttcccaccatgcagcctatgaaggaagctccagtggaaattcttctccagaa
tacccaagaaaagaatttgcatcttcctccaccagggggcggactcagagcagagagagt
gaaatccgggtacggctgcagagtgcttctccctccacgagatggacagaactcgacgat
gtgaaacgtttagtgaagggaggccggtccaccagcctcagccccactcgctccccttcg
aacactctccccatccccaagaaagccactgtggaaaccaagatagtaacagagggttcg
caatcagcatcaggaacttatgatacaaccatcttggatgctgcccttccatcctacatg
tggacctccaccctacccatcggatcctccgtcagtggttaccacaacaacatgacccat
agttcatctctgttgaatgcaaacacgcagtcaacgggttcagtgtttgcctttccgaac
aacctggctcccagccaccctacactgaactctgggctcaacacatcctctacagtattt
ggcgttcagaacaaccttactccaagctccggtctcatcagcagcaacacagtcacagca
tcgtctgcagcatatggagttaaaaagaatgtccctccttgcagccacagcactggggtc
ctcagcagcaccatatccacatcggctgctaacactgggaccacccgcagcgacgatatc
ctgatgaaggattacaagttcctgctgctggagaaggagaatgctccaccaaagaaggag
tcagacatcctgatcatgtccaaggacagcgggaaggtcttcacagcttccaccactgga
atcagcacttcactgggtgaagacaccctcaagaaagagaagcagataattatcagtaat
ggagactcctatctgaaatcggaggcaaatggcggtctaaaagtcacaaaggacaaagcc
acctatgcagaaatccataaagattacggagcaggcggaggcggaggaggaataggtgca
gctccggcttggtgtccttgtggttcttgctgtagctggtggaaatggctcttaggtttg
ctcttggcctggttgctgcttctcggtctactctttggactcattgctttagcggaggag
gtgaaggcactgaaatctcgtgtgacagagttggaaagcctgagtcacactaatcgactt
acctctgtggatatcaatggtttaaaccttgcaaagtcagaacgcatacatgacctgaaa
caccgaacggaaatcaataccttggatgcagattttcacggtcagacacgagagaacctg
tggctgtatatacgagacagaatgcggacagacaaagacctagcatatttcaagggagag
aggggagagcctggacagaaaggtgatatgggaatacagggttctaaaggagatcgtggg
ctcccgggaccatcagggcctcaagggcttcttggacacacaggaccagaaggacccaag
ggaacaaagggcagtacaggtgaatctggtatggagggacccatgggacagagaggacga
gaaggtccacctgggcctcgtggtgagcctggaccatccggatttggggagaagggagac
agaggtccaacaggagaaccaggtcttccagggtcaccaggtgtaccaggttcggtgggt
cccaaaggtaactccggatctgctggaccacagggcattccaggtagtccaggcattcaa
ggtttccgaggtgaggcaggtcttccaggtcctaaaggtgataagggaactatgggagca
ccaggaccgaaaggtgaccatggagacaaaggttctcgaggcctgacaggagaaccaggt
gcccggggattacctggccctataggagaggcaggggtcaaaggctcagcaggtgcacct
ggaccggatggacgccagggtctaagaggagaaacaggacttatgggattagctggaccc
cgaggcccacctggtccggcaggagatgcaggattagccgggattccaggattacaagga
cctccagggcttcggggtgagccagggcgaccaggggcaaaaggcgatactggatctgca
ggcagggttatcagtgcagagggcttgtcatcttttaatattcctggccctcctggtcca
ccaggacctactggccctgaaggtccaccaggtgttccaggttctattgggccagctgga
ctcccaggacagccaggtcaaaaaggagcccgcggtgaggcaggagaagctgtgtatgtg
actaggacagagtcgtcaagatcagaaagagttggtaatgctgaagctcaggctggatac
acgggagcacaagcaggacctccagggcccccaggtcctccaggcccaccaggagcttcc
attcaggggccaccaggaccaccaggcattccaggggaaggcagacagggaccaccaggt
ccaccaggatcttttgtacctacttcagaaaccttctttgcaggacccccaggtcctcct
ggcccacctggccctaagggagatcaaggtgaacgagggcgacaaggattccaaggtgaa
cccggacagccaggcctcccaggagtcacaggacgtgaaggtcaaatagtaattggacct
atgggacctcccggcaatccaggccttccaggcccacaaggaccaccaggagaaagaggt
gaagcaggtgttccaggggcacccggcatcccaggagcagcacgagtttcaggttcaggt
tcagtttcaagttcaggttcctggacccagggacccccaggtccccctggccctcctggt
ccacccggagctgccggacgtagctctcaggaaatccagcagttcattgctgagtacctt
cagagtattgggtacgcatctggtttgccagggccactgcgtcctgcaggagcctcaggg
atttctgatgaaatcattttactactgcaaagagatgatgttcgtcagtacctcattggt
cctcctggtccaccagggccctctggaggtggttccgtctccttggattattccgagctg
gctagccgacttatgacctacatgagcaattctgggattagtattggtgtccctggtcca
cctggttctcctggtctccctggactatcgtatggtgatataacagctctgctccaaact
tctgaatttagtaggattgttgggccaccaggacctccagggcaacccggtcatccagga
tccccaggacctgttgggccaccaggacctctcagttcaagtcaagttggcttcagcgtg
gagcaaatggctgcctacctagaacgtgcaggttacgttggaggaatccaaggaccaccc
ggacccccaggacctcaggggccgcctggcaactccggactggtctcctatgctgaaaat
atccaaagtgatcgattcaggaccgagctgattgaatatctatcaagtgacagtgtccga
aggtacatttcaggacccccagggcctcaaggaccaccaggacctaaaggagatagtgga
attttgtcatcttcttcatcgctatcatcctcatcctcatcgtccttatcatcttcttca
acttcatcttcatcgctggcatcaatgctagattatagtgagatatcgacccgggtggtt
gaaaacatacagaatcaaggactgcttcaggacgttacttatactgtgcagggaattcca
ggtttacctggacctccagggcctcctgggagacccggagtcagcagagtatttgcagca
tatggaaatgttaccgaggatctcatggactttttcagaacttatggtacaattccaggc
acccctggtatcccaggtcagaaaggagagagaggattccctggtcccaaaggtgagatt
ggactacaaggttttccaggccctcaaggaccaaggggacagaaaggtgaacaagccatc
attggcagacggaaaagaagaagtactggcttatga
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