Microcaecilia unicolor: 115470452
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Entry
115470452 CDS
T09142
Symbol
CTCF
Name
(RefSeq) LOW QUALITY PROTEIN: transcriptional repressor CTCF
KO
K23195
transcriptional repressor CTCF
Organism
muo
Microcaecilia unicolor
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
muo03000
]
115470452 (CTCF)
03036 Chromosome and associated proteins [BR:
muo03036
]
115470452 (CTCF)
Transcription factors [BR:
muo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
115470452 (CTCF)
Chromosome and associated proteins [BR:
muo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
115470452 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_ZN142
zf-C2H2_REST
zf-met
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-C2H2_6
zf-C2H2_15
zf-WIZ
DUF8106
Zn_ribbon_DUF2089
Motif
Other DBs
NCBI-GeneID:
115470452
NCBI-ProteinID:
XP_030059504
UniProt:
A0A6P7Y9K5
LinkDB
All DBs
Position
5:complement(182449029..182861969)
Genome browser
AA seq
731 aa
AA seq
DB search
MDGDTIEAIVEESETFMKVKERKTYQRRREGGQDDDLPQTQTDGSEVAHDVNSSVQMVMM
EQLDPTLLQMKTEVMEGGVPQEGDPTVDDTQIITLQVVNMEEQPINLGELQLVQVPVPVT
VPVAASSVGELHAAYENEVSKEILQDGEPMICHTLPLPEGFQVVKVGANGEVETLEQAEL
QAQEDTSWQKDPDYQPPVKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSDVNAE
KVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAF
RTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPXKCSMCDYASVEV
SKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMK
MHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERYALI
QHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDMHFK
RYHDPNFVPAAFVCSKCGKTFTRRNTMARHSENCTGPDGTDGENGGEGQEPSMKKSKRGR
KRKMRSKKEDSSDSEENAEPDLDDNEDEEETAVEIEPEPEVQMVTLVPPPAKKRRGRPPG
KTNQPKQNQTAAIIQVEDQNTGAIENIIVEVKKEPETETVEGVVEQVQAAAPVEAPNGDL
TPEMILSMMDR
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgacacaatagaagccattgtagaggaatctgaaacttttatgaaagtgaaa
gagcgaaaaacctatcagagacgacgtgaaggtggacaggatgacgacttgccacagacc
caaacagatggcagtgaagtagcccatgatgttaacagcagtgtccaaatggtcatgatg
gagcaactagatccaacacttcttcaaatgaagacagaagtaatggaaggtggagttccc
caggaaggtgatccaactgtggatgacacacagataataacattacaggttgtgaatatg
gaagagcaacctataaatcttggagaactgcaacttgttcaagttcctgtgccagtgact
gtacctgtagcagcatcttctgtaggagaacttcatgcagcttatgaaaatgaagtatcc
aaagaaatacttcaggatggagagcccatgatctgtcataccttacctttgccagaaggc
ttccaggtagtaaaagtgggagccaatggtgaagtggaaacattagaacaagctgaactt
caggcacaggaagacacaagctggcaaaaagatccggactatcagccaccagtcaaaaag
acaaagaaaacaaaaaaaagtaaattacgttatacagaggaaggaaaagatgtggatgtt
tctgtgtatgattttgaagaagagcagcaggaaggattgctttcagatgttaatgcagaa
aaggtggttggtaacatgaaacctccaaagccaactaaaattaaaaagaaaggtgtgaag
aagacattccagtgtgagctctgcagttacacgtgtccacggcgttctaacttggatcgt
catatgaagagccacactgacgaaagaccacacaaatgccatttgtgtggtagagctttc
aggacagtcacattgctgagaaaccacctgaacactcatacaggtactcgtcctcacaag
tgtcctgattgtgacatggcctttgtgaccagtggagagttggttcggcatcgtcgttac
aagcacacacatgagaaacctnttaagtgttcaatgtgtgactatgccagcgtggaggtc
agcaagttgaaacgccacattcgctctcacacaggggaacgtccattccagtgcagtctg
tgcagctatgccagcagagatacctataagctgaagagacacatgcggacccactcgggt
gaaaagccatatgaatgttatatctgccatgctcggtttacccagagtgggaccatgaag
atgcacattctgcagaaacacacagaaaacgtggcaaagtttcattgtcctcactgtgac
acagtgattgcaagaaagagcgatttaggtgtccatttaagaaaacagcattcctacatt
gagcagggcaagaagtgtcgttactgtgatgcagtgttccatgagcgctatgcccttatt
cagcatcagaagtctcacaagaatgagaagcgcttcaagtgtgaccagtgtgattacgcc
tgtagacaggaacggcacatgatcatgcacaagcgcacccatactggagaaaaaccttat
gcctgcagccattgtgataaaactttccgccagaaacaactacttgacatgcacttcaaa
cgttaccatgaccccaactttgtccctgctgcctttgtctgttccaagtgtgggaagacc
tttactcgcaggaataccatggctagacactctgagaactgtactggtcctgatggcaca
gatggagagaatggaggtgaagggcaagaaccatcaatgaagaagagcaaacgtgggcga
aagagaaaaatgcgctccaagaaagaggattcctcagatagtgaagaaaatgctgagcct
gacctggatgataatgaagatgaggaagagacagcagtagaaattgaacctgagccagaa
gtgcagatggttactcttgtgccgcctccggcaaagaaacgaagaggaaggccacctggc
aaaaccaaccagccaaaacagaaccagacagcagcaatcattcaggtggaagaccagaac
actggtgccattgaaaacatcattgtggaagtaaagaaagagcctgaaacagaaactgta
gaaggagtggtagagcaggtgcaggcagcagcaccagttgaagctcctaatggagaccta
accccagaaatgattctcagcatgatggaccgatga
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