Microcaecilia unicolor: 115470464
Help
Entry
115470464 CDS
T09142
Symbol
EDC4
Name
(RefSeq) LOW QUALITY PROTEIN: enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
muo
Microcaecilia unicolor
Pathway
muo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115470464 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
muo03019
]
115470464 (EDC4)
Messenger RNA biogenesis [BR:
muo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115470464 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
115470464 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
Beta-prop_HPS5
CelTOS
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
Motif
Other DBs
NCBI-GeneID:
115470464
NCBI-ProteinID:
XP_030059522
UniProt:
A0A6P7XVQ4
LinkDB
All DBs
Position
5:complement(186650444..187845482)
Genome browser
AA seq
1401 aa
AA seq
DB search
MSMDPSSSIDVDATQHLRDILKLDRPGPNDSGNEIQRNPSSYNGDLNGLLLPDPIAAGDG
VLLSEPNLRNAAMVNXQEKQVICLSGDDSSTCVMISAKDVEIVASNDSSICSKARGSNKV
KIQPVAKYDWEQKYYYGNLIAVSNSYLAYATRGANGSAMVRVLSVSTAERILLKGIVGRV
ADLAFAHLNSNLLSCLDEAGNLFVWQLTMENEKIQEEILVYIKRPDGTPLNNFRRIVWCP
FISDENEENASEEGSQTLALLHEDRAEVWDLDIVRANHSSWPSNVTDIKEGFIIVKGHSA
RLSEGALSPDGTVLATASHDGYVKFWQIYIEGQDQPRCLHEWKPHNGKPLSCLLFCDNHK
KQDPDIPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDPFNSSVLPGLKACLDLSAE
YLILSDVQRKVLYVMELLQSQDEGRALFTSISEFLLTHPVLSFGIQDVSRCRLRHTEVLP
AEEENDSITVEGSQGPGAVESAAGVLIKLFCVHTKALQDVQIRFQPPQXVDAATLSGVHT
SHQILVTFSDHLADLGSEEKGSIHSSQPDLRRITDLPLPADFLTLSNDVKPKLMTPDAFM
TPSTTLQMAASPGSSVSTLTAVTALSSTSINDTIISRPSEDLTLSPMLHLDSNLTVGSTT
NSSSSMQNSPRSHSVLIPGLSDKLTPKPAVQISAGNLPLELQALEPLVVPQASPTRERSP
DVISSASTAMSQDIPEIASETLQRSFAPAPLGLPAEVLEPNHRTDSMASAASALHLLSPR
NRRNSEHSHHSLDMVSGGDVDRLNTPSLLETALMPENAASDSVVSQAWPAAPDITRETRN
SMADSLRDEVQEKHKSSSFHRHSYHMLRDSQDVSTEQSDHDDEVESLAITSANFAAKGST
QRVPVKDWKAKVSPRASPKPRRKSKKDEGDRAQSPRKPDLQVNSEFQEELMALLRSQQRE
LSELRENQLELIQRLTNHMDSVQSSIMGHVERVIDSQQEQEQRRLDRVLSEGQQRNGQLQ
EHVSQQLSQSLSSALCNRLDKTVREEMKKTLPQSVSKSLEPVTSQLSTTIAAKLTAVEGT
LKENVTKLVKSKNTTDAIGRAAADALQGPIQSAYKEAFQSIMLPSFEKGCQSMFQQINSS
FKQGTQDYIQQLETHLQNKKVNEQEARDPLLSQLQHQMDTLQSITEQLASTITTSVRSEV
QQQLHVVMSSMQESILTQVQRIIKGEVSHAMKEQQAAVTSSIMQAMRSAAGTPIPSSQLD
LQSQQAHILQLMQQGHVNQAFQQALTASDLNLVLYVCETMDPQQVFDQHPCPLSQPVLLS
LIQQLASDLSTCTELKLNYLDEALMHLDHSDPVTHDHMGTVMNQVRQKLFHFLQVEPHSP
LNRLARRLMMMLQGLVSPGMS
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atgtccatggatccgtcttccagcatagatgtcgacgcgacgcaacatctgcgggatatt
ctgaaattggaccggcctggaccaaacgattcaggaaatgagatccaaagaaatcctagc
tcctacaatggagacctaaatggcctgttgctgccagacccaatagcagcaggagatgga
gtcttgctgtcagagccaaatctccggaacgctgccatggtaaacntacaggagaagcaa
gtcatttgcctctctggagatgatagttcgacttgtgtgatgatatctgctaaggatgtg
gagatagtggccagcaatgattccagcatctgcagcaaggccagaggaagcaataaggtt
aaaatacagccagtagctaaatatgattgggagcagaaatactattatggaaatctgata
gctgtttctaactcctacctagcatatgctactagaggtgctaatggttctgccatggtg
cgggtcctgagtgtttccactgcagagagaatcttgctaaagggcattgttggtagagtt
gctgacctggcctttgctcacctcaactccaacctattgtcttgcctagatgaggctggc
aacctttttgtctggcaactgaccatggaaaatgagaaaattcaagaagagattctagtt
tacataaagagacctgatggcacaccgctgaacaatttccgcagaatcgtatggtgtccc
ttcatctcggatgagaatgaggagaatgccagtgaggaggggagtcagacactggccttg
ctacatgaggaccgggcagaggtttgggacttggacattgttcgagccaaccacagttcc
tggccatcgaatgttactgatatcaaggaaggtttcatcattgtgaaaggtcatagtgcg
cgtctcagtgaaggagcactctctccagatgggacggtcttagccacagcaagtcatgat
ggttatgtcaaattctggcagatctacattgaaggtcaagatcagccaaggtgtctacat
gagtggaagccccataatgggaaacctctctcctgtcttctcttctgtgacaaccataaa
aaacaggatccagacattcctttctggaggtttttgatcactggagcagatcagaataga
gaactgaagatgtggtgcacagtatcatggacctgtctacaaactatccgattttctcca
gatccatttaactccagtgtgctcccaggactcaaggcctgcctagacctttctgctgag
tacttgatcctcagtgacgttcagcgaaaagtcctttatgtcatggagctcctgcagagc
caggatgaaggcagagctctgtttacatccatttcagagttcctccttactcaccctgtg
ttgagctttggaatccaagatgtgagccgctgtcgtttgaggcatactgaagtcctccca
gctgaggaagagaatgacagtattactgtagaaggatcacaaggacccggagctgttgaa
tctgcagcaggagtactgatcaagcttttctgtgtgcacacaaaggctctgcaggatgtt
cagattcggtttcagcctcctcaantggtggatgctgctacattgagtggagtccataca
tcccatcagattttggtaacattttcagatcatttggcagatctgggctctgaggagaag
ggatccatacatagttctcagcctgacttgcgacgcataactgatctacccctaccagcg
gacttcttgactctttccaatgatgtgaagcccaagctgatgacacctgatgccttcatg
actcccagcaccactcttcagatggctgcatcacctgggagcagtgttagcacgcttaca
gcagtgactgcactgagcagcacttcaatcaatgataccatcatatcaaggccatctgaa
gacctgacactgagtcccatgttgcatctggacagtaatctgactgtaggcagcactact
aacagcagcagtagtatgcagaacagtccaagaagccattctgtccttattccaggtctc
tcagacaaattgaccccaaaaccagctgtgcagatatctgcagggaatcttcctctggaa
cttcaagcactggagcccctagtggttccccaagcttcacctacccgggagcgctcgcct
gatgttatttcctcagcctccacagctatgtcccaagacatccctgagattgcttctgag
actttgcagcgcagctttgccccggcacctcttggacttcctgctgaagttttagaacca
aaccatcgcactgacagcatggcttctgctgcatctgccctacatctgctctccccaagg
aacaggcgtaactctgaacatagccatcactccttagatatggtatctggtggggatgtg
gacagattgaacacaccctcattgctggaaacagccttgatgccagaaaatgctgcttca
gatagtgtggtgagtcaggcatggccagctgctccagatatcaccagagaaaccaggaac
agtatggcagacagtctcagggatgaagttcaagagaagcataagagctcttccttccac
cgacacagctaccatatgctgcgtgacagccaggacgtcagcactgagcagagtgatcat
gatgatgaagttgaaagcctggctatcacatctgcaaattttgctgccaagggatctact
caaagagtgcctgtgaaagactggaaagccaaggtttctccccgagcgtctccaaaaccc
agaaggaagagcaaaaaagatgaaggggaccgggcacagtcaccaagaaagcctgatctt
caggtgaactcagagttccaggaggagctgatggccctgctgcgcagccagcagcgggaa
ctctcagaattgagagagaaccagctagagttgatacagagactcacaaaccacatggat
tctgtgcagagctccatcatgggccatgtagaacgagttatcgattctcaacaggagcaa
gaacagaggagactagatcgagtcttgtcagagggtcaacagaggaatggacagctccaa
gagcatgtgtctcagcagctgtcgcagtctctctccagtgctttatgtaatcgtcttgac
aaaactgtccgggaagagatgaaaaagacattgccacagagtgtttctaagagcttggag
ccagtgacaagccaactgagtactaccatagcagccaagctcactgctgtggaaggtacc
ctgaaggagaatgtaaccaagttagtgaaatcaaagaacactactgatgcaattggtcga
gcagcagcagatgccttacagggacctatccaatcagcctacaaagaagcattccagagt
atcatgctaccatcttttgagaagggctgccaatccatgttccagcagatcaacagcagc
ttcaagcaaggaacccaggattatattcaacagctggagacacatctgcaaaataagaag
gtgaatgagcaagaagccagagacccactactcagccagcttcagcatcagatggataca
ttgcagagcataacagagcaactcgcttccaccatcacaactagcgtgcgctctgaggtg
cagcagcagctgcatgtggtcatgagcagcatgcaggaatctattctcacccaggtgcaa
aggattatcaagggagaagtgagccacgcgatgaaggagcagcaggctgctgttacttcc
agcatcatgcaggctatgcggtcagcagcaggcacacctattccctcttctcagctagat
ctccagtctcagcaggcacacattttgcaactaatgcagcagggacatgtcaatcaggct
ttccagcaggctctaacagcttcagacctgaatcttgtgctctatgtgtgtgagacaatg
gatcctcagcaagtgtttgaccagcacccgtgtcctctctcacaacctgtcctcctgtcc
ctcattcagcagcttgcctcagatttgagcacatgtactgagctcaaactcaactatttg
gatgaagctctgatgcatttagaccacagcgaccccgtgacccatgatcatatgggcact
gttatgaaccaagtacgacagaagctctttcatttcctgcaggtggagccgcatagcccc
ttgaacagactggctcggcgcctgatgatgatgctgcaaggcctggtcagcccaggcatg
agctaa
DBGET
integrated database retrieval system
