Microcaecilia unicolor: 115471632
Help
Entry
115471632 CDS
T09142
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
muo
Microcaecilia unicolor
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
muo03000
]
115471632 (RC3H1)
04121 Ubiquitin system [BR:
muo04121
]
115471632 (RC3H1)
Transcription factors [BR:
muo03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
115471632 (RC3H1)
Ubiquitin system [BR:
muo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115471632 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-CCCH_UNK
zf-C3HC4_2
zf_CCCH_4
zf-CCCH_4
FYVE
Vesi_VP2
PaaA_PaaC
Baculo_IE-1
zf-RING_4
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
115471632
NCBI-ProteinID:
XP_030061223
UniProt:
A0A6P7Y8A2
LinkDB
All DBs
Position
6:84888067..85231976
Genome browser
AA seq
1125 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQSIMLCSGIEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLDNGLVAVKTVVHGLVDYIQNHSKKGTDQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPTGSILPDE
GPVDMSSRKTSGLPNGIVPTGNVVTQLIPRGTDSSYDPALKPGKIDHLSSSAPGSPPELL
ESLPKNSISALPLNPHPVPPRVPADLPPISVAKQLQMVPRGSQMYPPQQADVFYQDPRGA
EPATYQPNVYYTSQSSQCVSRFVRPPPSAPEPGPPYLDHYSPYLQDRVVSSQYGTQPQQY
PPMGQPMYAPHYDSRRVYPPAQSYQREEMVRASPVPIDIPPATVSPYIPETRDRYQQVEG
YYPVGPHPGQIRPSYHREPYGRLPPQSHPSLDDLHRRRKEIMAQLEERKVISPPPFAPSP
TLPPPFHSDEYLNEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDAVVAGNVEM
TNVETKSLREQRLDLQRRVPEASDDDLIPFGDRPTVSRFGAISRTSKTLYQAAGPLQAMA
TQGAATKSVSISDYTPYGTQNSWGTPQYTPHQTISSQGHFSERERIPMADVAGHGKPIPT
SERDQLRMELQQLNHQINQQTQMRGIEAASNRLLLQREPSQPPLPPKWPAMISSEQLSLE
LHQVEREIGKRTRELSLESQSQDMKSKVNIGKQAENGQLEAQSKIPAEDLTLTFSSDVPN
GSTLSQENMSLLSNKTASLNLSEDPEAGGDNSDPQRAGVTSSSAS
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacaatggacggattttctctcctgccctatctgtactcaaact
tttgatgagaccattcggaagcccatcagtctgggttgtggccacacagtgtgcaagatg
tgcctgaacaaactccaccgcaaggcttgcccttttgaccagaccactatcaacactgac
attgaactccttcctgtaaactctgccttgctacaactagtaggtgctcaggttcctgag
cagcagtccatcatgttgtgcagtgggattgaagacaccaaacactatgaagaagccaag
aaatgtgtggaagaattagcactgtacctgaaaccacttagcagtgcaagaggtgtggga
ttgaacagcaccactcaaagtgtgctaagtcgtcccatgcagaggaaactggtgacattg
gtccactgtcagctggtggaggaggaagggcggatccgtgcaatgcgtgctgcacgttca
ttgggtgaaagaacggtcacagagctcattcttcagcaccagaatcctcagcaactctcc
tcaaacctctgggcagctgtaagggcccgtggctgccagttcctcggaccagcaatgcaa
gaagaagccttgaagttagttctgctggctttggaggatggatctgcattgtctcggaag
gtgctggttctttttgtggtccagaggctagagccacggtttcctcaagcttctaagact
agcattgggcatgttgtccaactcctttacagggcctcctgtttcaaggtaacaaaacgt
gacgaggactcctcattgatgcagttaaaagaggaatttcgcacttatgaagctctgcgg
cgagagcatgactctcagatagtgcagattgcaatggaggctggcctgcgcattgcacca
gatcagtggtcttcgcttctttatggggaccagtctcacaaatcccacatgcagtccatc
attgacaagttgcagaccccagcctcatttgcacagagcgtccaggaattgactattgct
ctgcagcggactggtgatccagccaatctgaaccgactccgaccacacttggagctgctg
gccaacatcgaccccagcccagatgccccaccaccaacatgggaacagctagataacgga
ctagtagctgtgaagactgtggttcatggactagtagattacattcagaaccacagcaaa
aaaggaacagaccagcagcagccccctcagcacagtaaatataagacgtacatgtgccga
gacatgaaacaaagaggaggttgtccccgtggagccagctgcacctttgcacactcacaa
gaggagttagaaaaattccgtaaaatgaacaagcgtcttgttcccagaagaccactgagt
gcctctttgggccagctaaatgaggtgggcctccctacaggttccatcctcccagacgaa
ggaccggtagatatgtccagccgaaaaacctcaggtttgccgaatggcattgtacccaca
ggaaatgtggtgactcagctgattcctcgggggactgactcgagctatgatccagcgctg
aagcctgggaagattgaccatctgagcagcagtgctcctggctcccctcctgaattgttg
gagtctcttcccaagaattctatatctgccttacctttgaatcctcaccctgtgccccct
cgagtaccagcagatttgcccccaatatctgtcgccaaacaactccagatggtacctcgt
ggctctcagatgtatcctcctcagcaggcagatgttttctatcaggaccctcgaggagcc
gagccagccacctatcaaccaaatgtctactatacatctcagtcctcacagtgtgtgtcc
cgttttgtccgacctcccccatcggctccagagcctggtcctccttatttagaccattac
tcgccatacctccaagatcgtgtggtgagctcccaatacggcactcagccacagcagtac
cctccgatgggtcagccaatgtatgcaccacactatgatagtcggcgtgtgtatcctcct
gctcagtcataccagcgagaagagatggtcagggcaagtcctgtacccattgacatccca
ccagcaacagtgtcaccgtacatacctgaaacaagagatcgctaccagcaagttgaggga
tactatcctgtgggacctcatcctggacagatcagaccttcttaccatagagagccttat
ggccgcttgccaccacagtctcatcccagcctagacgatcttcatcgtcgacggaaagag
atcatggcccagttagaggaaagaaaagtgatctccccaccgcccttcgcaccatcacca
actttgccacctcctttccattcagatgagtacttgaacgaagacctgaaagtagcaggt
aaatacaaaggaaatgactacagtcagtactctccctggtcatgtgataccatcggctcc
tacattggaaccaaagacgcaaaacccaaagacgctgtagtggccgggaatgtggagatg
acgaatgtagaaactaaaagcctgcgagagcaaaggttggacttgcaaaggagagtgcct
gaagctagtgatgatgacctcatcccatttggagatagaccaacagtgtcccggtttgga
gccatctcccgcacttctaaaaccctatatcaagctgctggtcctttacaggccatggca
actcaaggagctgccacaaaatcagtcagcatttcagattacactccatatggaactcaa
aacagttggggaaccccacaatatacacctcaccaaaccatatcttctcagggacatttc
agtgagagagaacgaataccaatggcagatgtggcgggccatgggaaacccatacccaca
tcagagagagatcagctaaggatggaactacagcagctcaaccatcagatcaatcagcaa
acacagatgcgaggaattgaggctgctagtaacaggctgctgttgcagagggagccaagc
cagccaccgctaccccctaagtggcctgcaatgatatccagtgaacagctgagcctagag
ctacaccaggtggagagagaaatcggcaagagaactcgggaactaagcctggagagtcag
tcccaggatatgaaaagtaaagtgaacatcggtaaacaggcagagaacggacagctagaa
gcacagagcaagattccagctgaagacctcacgctaactttcagcagtgatgtgccaaat
ggatcaaccttgtctcaagaaaatatgagcctcctgtcgaacaagactgcctctctgaac
ctgtcagaggatcctgaggctggaggagacaacagtgaccctcagagagctggagttaca
tcctcttctgcttcataa
DBGET
integrated database retrieval system
