Microcaecilia unicolor: 115472272
Help
Entry
115472272 CDS
T09142
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A isoform X1
KO
K12849
pre-mRNA-splicing factor 38A
Organism
muo
Microcaecilia unicolor
Pathway
muo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115472272 (PRPF38A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
muo03041
]
115472272 (PRPF38A)
Spliceosome [BR:
muo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
115472272 (PRPF38A)
Complex C
U4/U6.U5 tri-SnRNP related factors
115472272 (PRPF38A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
115472272
NCBI-ProteinID:
XP_030062347
UniProt:
A0A6P7Y4A3
LinkDB
All DBs
Position
6:26724221..26772856
Genome browser
AA seq
312 aa
AA seq
DB search
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTATDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDVILPRLQKRYVLEEAEQLDTR
ISALEEDMDDVESSEEDDDDDDKMDRVPSPDHHRRSYRDLDRPRRSPSPRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRERRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRVNE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcgcacggtgaaagatgctcatagtatccacgggactaatcctcagtatctg
gtggagaagatcatccgtacgcggatctacgagtctaagtactggaaggaagaatgcttc
ggcctgaccgctgaacttgtcgtagataaagccatggagttgaaattcgttggtggtgtt
tatggtggaaacataaaacctacccctttcctgtgcttgaccctgaaaatgctgcagatc
cagccggaaaaggatatcattgttgagtttataaagaatgaagatttcaagtatgtgaga
atgttgggcgccttatatatgagactaaccggcacagccaccgattgctacaaatacctt
gaaccactgtacaatgattatcggaagataaagagccaaaataggaatggagaatttgaa
ctgatgcacgtggatgaattcatagatgagctcctgcacagtgagcgtgtttgtgatgtc
atcttacctcggctgcagaaacgttatgtattagaagaagccgaacagctggatactcgt
attagtgctttggaagaagatatggatgacgtggagtccagtgaggaggatgacgacgat
gatgataagatggatagagtcccatcacctgatcaccacagaagaagctatcgagactta
gatagaccacgcagatctccttcaccacgatatcggcggagtcgaagcagatctccaaga
aggcgaagtcgctctccaaagcggaggagcccctcaccacgccgggaacgacatcgtagt
aaaagtccaaggcgccatcgaagcagatccagggaaagacgccaccgatcaagatccaaa
tctccagggcatcatcgaagccacagacacagaagccattctaaatcccctgaaagatca
aagaaaagccacaagaaaagtcggcgtgtaaatgaatag
DBGET
integrated database retrieval system
