KEGG   Microcaecilia unicolor: 115472272
Entry
115472272         CDS       T09142                                 
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A isoform X1
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
muo  Microcaecilia unicolor
Pathway
muo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:muo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115472272 (PRPF38A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:muo03041]
    115472272 (PRPF38A)
Spliceosome [BR:muo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    115472272 (PRPF38A)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    115472272 (PRPF38A)
SSDB
Motif
Pfam: PRP38 PRP38_assoc
Other DBs
NCBI-GeneID: 115472272
NCBI-ProteinID: XP_030062347
UniProt: A0A6P7Y4A3
LinkDB
Position
6:26724221..26772856
AA seq 312 aa
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTATDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDVILPRLQKRYVLEEAEQLDTR
ISALEEDMDDVESSEEDDDDDDKMDRVPSPDHHRRSYRDLDRPRRSPSPRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRERRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRVNE
NT seq 939 nt   +upstreamnt  +downstreamnt
atggcgaatcgcacggtgaaagatgctcatagtatccacgggactaatcctcagtatctg
gtggagaagatcatccgtacgcggatctacgagtctaagtactggaaggaagaatgcttc
ggcctgaccgctgaacttgtcgtagataaagccatggagttgaaattcgttggtggtgtt
tatggtggaaacataaaacctacccctttcctgtgcttgaccctgaaaatgctgcagatc
cagccggaaaaggatatcattgttgagtttataaagaatgaagatttcaagtatgtgaga
atgttgggcgccttatatatgagactaaccggcacagccaccgattgctacaaatacctt
gaaccactgtacaatgattatcggaagataaagagccaaaataggaatggagaatttgaa
ctgatgcacgtggatgaattcatagatgagctcctgcacagtgagcgtgtttgtgatgtc
atcttacctcggctgcagaaacgttatgtattagaagaagccgaacagctggatactcgt
attagtgctttggaagaagatatggatgacgtggagtccagtgaggaggatgacgacgat
gatgataagatggatagagtcccatcacctgatcaccacagaagaagctatcgagactta
gatagaccacgcagatctccttcaccacgatatcggcggagtcgaagcagatctccaaga
aggcgaagtcgctctccaaagcggaggagcccctcaccacgccgggaacgacatcgtagt
aaaagtccaaggcgccatcgaagcagatccagggaaagacgccaccgatcaagatccaaa
tctccagggcatcatcgaagccacagacacagaagccattctaaatcccctgaaagatca
aagaaaagccacaagaaaagtcggcgtgtaaatgaatag

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