KEGG   Microcaecilia unicolor: 115472288
Entry
115472288         CDS       T09142                                 
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4 isoform X1
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
muo  Microcaecilia unicolor
Pathway
muo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:muo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115472288 (PRPF4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:muo03041]
    115472288 (PRPF4)
Spliceosome [BR:muo03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    115472288 (PRPF4)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40 Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_Gbeta WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd PRP4 Beta-prop_WDR75_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_Aladin WDR90_beta-prop_4th NBCH_WD40 Beta-prop_WDR41 Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_Vps41 Beta-prop_IFT122_1st WD_LRWD1 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N WD40_like
Other DBs
NCBI-GeneID: 115472288
NCBI-ProteinID: XP_030062369
UniProt: A0A6P7YBS5
LinkDB
Position
6:complement(225088886..225770974)
AA seq 508 aa
MSDDEDGSPVVKKSRIFYGSLAEKERERLAKGEPALLGKAAVKAAIEAGNINITSGESFD
LEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLR
NVLSVVGADALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKTARLWIARYSLPRALRRLD
EARKQKEIPESTRTSQKQELHKSLRTLNNFCSQIGDDRPISFCHFSPNSKLLATACWSGL
CKLWSVPDCNLVKTLRGHNTNVGAIVFHPKSTISLDEKDVNLASCAADGSVKLWNLDSDE
PVADIEGHMMRVARVMWHPSGRFLGTTCYDHSWRLWDLEAQEEILHQEGHSKGVYDIAFH
IDGSLASTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGISFSPNGYHIATGSGDNTSKVW
DLRMRKCIYTIPAHQNLVAAVKFQPTIGSFLLTGAYDNTANVWTHPGWAPLKTLAGHEGK
VMGLDISLDGELIATCSYDRTFKLWMAE
NT seq 1527 nt   +upstreamnt  +downstreamnt
atgtcagatgacgaagatggttcccctgtggtgaagaagtcccgtatattttatggaagc
ctagcagaaaaggagcgagaacgacttgcaaaaggagagcctgcactgttaggaaaagca
gcagtgaaagcggcaatagaagcaggcaatattaacataaccagtggtgagtcctttgat
cttgaggagcacatcagtgagcggcaggcagaggtgcttgctgagtttgaacgcaggaag
cgagcaaggcagatcaatgtctctacagatgactcagaggtgaaagcttgcttacgtgca
cttggtgagccaattacacttttcggagaaggcccagcagagaggagagaaagattaaga
aatgttctttctgtggttggtgcagatgcattaaaaaagacaaagaaggatgatgagaaa
agcaaaaaatccaaagaggagtatcaacaaacctggtatcatgaggggccaaacagcctg
aaaacagccagactctggattgctcgctattcattacctcgagcactgagacggttagac
gaagctcgtaagcagaaagagattccagagtcaaccagaacatcacagaagcaagagcta
cataaatctctacggaccttaaataacttttgcagtcagattggggatgaccggccaatc
tctttctgccatttcagtcccaactccaaactcctggctaccgcatgttggagtgggctg
tgtaaactctggtctgtacctgactgtaatctagttaagacgctgagaggtcacaacaca
aacgtgggagctatcgtgttccatcccaagtccacaatatcactggatgaaaaggatgtc
aaccttgcatcttgtgcagcagatggctctgtcaaactctggaatctggacagtgatgag
ccagtagctgatattgaggggcatatgatgagagtggcccgagtgatgtggcacccttct
gggagattcctgggcaccacatgttatgatcattcatggcgcctgtgggacctagaagca
caggaagagattctgcatcaggaggggcacagtaaaggggtatatgacattgcctttcac
attgatggctcactggccagcacaggtggacttgatgcatttggcagggtttgggatttg
aggactgggcgctgtatcatgttccttgaggggcacctgaaagagatctatggcattagt
ttttctcctaacggatatcacattgcaacaggaagtggggataacacaagtaaagtgtgg
gacctgcgtatgaggaaatgtatttacactatccctgcccaccagaaccttgtggcagcc
gtcaaattccaacctaccattggtagcttcttgctaactggcgcatatgacaacactgca
aatgtctggactcacccaggctgggccccactgaaaacactggctggccatgagggcaaa
gtcatggggctggatatctcgctggatggtgaactgatagccacatgctcatatgacagg
accttcaaactttggatggcggaatag

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