Microcaecilia unicolor: 115472859
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Entry
115472859 CDS
T09142
Symbol
RC3H2
Name
(RefSeq) roquin-2
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
muo
Microcaecilia unicolor
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
muo03000
]
115472859 (RC3H2)
04121 Ubiquitin system [BR:
muo04121
]
115472859 (RC3H2)
Transcription factors [BR:
muo03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
115472859 (RC3H2)
Ubiquitin system [BR:
muo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115472859 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
Prok-RING_4
zf-CCCH_4
zf-C3HC4
zf_CCCH_4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
115472859
NCBI-ProteinID:
XP_030063186
UniProt:
A0A6P7YE15
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All DBs
Position
6:263599928..263821662
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AA seq
1131 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDETVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGGQVPDHQTIKLSSLGENKHYEVAKNCVEDLALYLKPLSGGKGVAS
LNQSTLSRPMQRKLVTLVNCQLVEEEGRLRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTSDPANLNRLRPHLELLANI
DPNPDASSPTWEQLANAMVAVKTVVHGLVDFIQNFSRKGHEALQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRSFPLLNKICINGTVTTSTGNIISVL
GSPETAGKMMQSTNSIASTESNVPQLISRCIDIAIRPVENVQKIGKISTDGQNVTGSPTE
SLLEKIGSPPKTPVSQVTSTSACSASMGMDVNSLPPKSSPFIARVPTYSPHSENVQYFQD
PRTQLTFEVSQYSQTGAFYPPPPPPPPALASCVPRFVRPSSVVEPSMPYTDRCSTFTPRD
RLTASPYQPSSPHQYGPVPPVPSGMYAPVYDSRRIWRPQMYHRDDIIRSNSLPPVEIMHA
SVYPTSLRERYNSLDGYYSVAGQLTNEQRTVPLSRESCTHLKPNYDEESRRKSEQWVPCD
NQKVHIASSTMPLIAQSPTSSSAFFSIDLSAEFSESVNDLTGPEFKNRDRLSQYSPWSCS
SISSCINSIDSEPKDVIANSNTALKDLNSSDVKKRVNLFEAQRRAKEEDPIIPFSDGPII
SKWGAISRSSRTGYHTTDPVQATASQGSTTKPITVTDYVPYISAVDSRWSLRASDATSYS
QYIERDRFLIVDFSGQKKHSSAGDMLKTEPQQSDYTEDISVTKPDRDIELELSVLDIDEP
DCQCEKAEVALDQVDQVSSGTVFENGLQHQQKEPLNQEVQRLAGEYAVLEKQTRLLPLTS
CFRQTVTTSRNNLPVTAAVSIGSFILKTSHMPEEKSDFLKPVASSKMVLNS
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaggcagctcagtggacagagttcctgtcctgtcctatttgttacaatgaa
tttgatgagacggtacataaacccatcagcttaggctgttcacatactgtctgtaagacc
tgcttgaacaaacttcatcgtaaggcctgtccttttgatcagactgctatcaatacagac
attgatgttcttcctgttaactttgcacttctccagttggtgggaggacaggtcccagat
caccaaacaataaaattaagtagcttaggagagaacaagcattatgaagttgcgaagaac
tgtgtagaagatttagcactctacttgaagccactaagtggaggaaagggtgttgctagt
ttgaatcagagcacactgagccgtccaatgcagagaaagctggttacgctggtgaactgt
cagctggtggaggaggaaggtcgtttaagagccatgcgggcagcacggtcactaggggaa
agaactgtaacagaacttattttacaacatcagaacccgcagcagctctcagctaacctt
tgggcagcagtccgggctcgtggatgccagttccttgggccagctatgcaggaagaggct
ctaaaattggtattacttgcattggaagatggttctgctctttcaaggaaggttttggta
cttttcgtggtgcagagactcgagcctcgatttcctcaggcatccaagaccagcatcggc
catgttgttcagctgctatatagagcttcctgtttcaaggtcaccaaaagggatgaagat
tcttccctaatgcagctgaaagaagagtttcgtagttatgaggctttgcgtagggaacac
gatgcacagattgttcacattgccatggaagcagggttgcggatatctcctgaacaatgg
tcttcccttctctatggagacttggcacacaagtcgcacatgcaatccatcattgacaag
ctccagtctccagaatcttttgcgaagagtgttcaagagcttactattgttctgcaacgt
acaagtgatccagctaacttaaacagattaaggccacatttagaacttctagcaaatata
gaccctaacccagatgcatcgtctccaacatgggagcagcttgcaaatgccatggtggct
gtgaagacagtggtgcatggtctagtggactttattcagaatttcagcagaaaagggcat
gaagcgctacagccacagccaaatagtaaatataaaacaagtatgtgccgagatctgcga
cagcagggaggctgtcctcgaggaacgaactgtacctttgctcactctcaggaagaacta
gaaaaatatcgactgaggaacaaaaagatcagtgctactgtgaggtcatttcctctactg
aataaaatctgcataaatggcactgtcacaacctccactggaaatattatttctgtctta
ggaagcccagaaactgcagggaagatgatgcaaagcactaatagcattgcaagcacagag
agcaatgttccccagctcatctcccggtgcattgatatagctatacgaccagtagagaat
gtccagaaaattggaaagatttccacagacggtcaaaatgtgactggatctccaacagaa
tcattacttgagaaaattggttctccaccaaaaactccagttagccaggtgacatctacc
tcagcgtgttcagccagtatgggaatggatgtgaattctttacctccaaagtccagccca
tttattgcaagggtacctacctactctccacattctgaaaatgtgcagtattttcaagat
cccaggacacagttaaccttcgaagtatcacagtactcacagactggagcattttatcct
cctccacctccaccaccaccagctctagcttcttgtgtgcctcgctttgtgagacccagt
agtgttgtggaaccttcgatgccatatactgatcgctgcagcacatttacccctcgagat
cgtctgacagcttctccataccagccatcatcaccacatcaatatgggccagttccccct
gtgccttctggcatgtatgccccagtgtatgacagcaggcgcatctggagaccacagatg
tatcatcgagatgacatcataaggagcaattctttgcctcctgtagaaatcatgcacgcc
tctgtatatccaacttcactgagagagcgatacaactctttggatgggtattattctgtg
gctggccaactaacaaatgagcagaggactgtacctttatccagggagtcttgtactcac
ttgaagcccaattatgatgaggagtcaaggcgaaagtctgagcagtgggttccttgcgac
aatcagaaagtacacattgcctcatcaaccatgcctttgattgctcagtcaccaacatca
tcatctgctttcttcagcatagaccttagtgcagagttctcagagagtgtaaatgatttg
accggccctgaattcaaaaacagagatcgtttgtcccagtattcaccatggtcctgcagc
agcatcagcagctgtataaattctattgattcagagcccaaggatgtcattgccaattca
aatactgcattaaaagacctcaacagtagtgatgttaagaaaagagtaaatttgtttgaa
gctcaaagaagagccaaggaagaagatcctatcattccctttagcgatggaccaatcatc
tccaagtggggtgcaatttccagatcctcccgaactggctatcacaccacagacccagtt
caggccactgcttcccaaggaagcactactaagcccatcactgtcacagattatgtccct
tatatcagtgctgttgattcaaggtggagcttgcgtgcctccgatgccacctcatactcg
caatatatagaaagggacagatttctgattgtggatttctctggtcagaaaaagcattcc
agtgctggagatatgttgaagactgaaccacagcagagtgattatacagaagacatctct
gtcactaaaccagaccgagacattgaattagaactttcggtccttgatattgatgaacct
gattgtcagtgtgaaaaggcagaggttgctctagatcaagttgaccaagtttccagtggg
acagtatttgagaatgggttgcagcatcagcagaaagagcctttgaatcaggaagtgcaa
agacttgctggagaatatgcagttctggagaagcaaaccagactcctgcccctgacgagc
tgtttcaggcaaactgtgaccacatccaggaacaacctgcctgtcactgccgcagtcagc
attggcagcttcatattgaagacatctcacatgcctgaagaaaaaagtgacttcttaaag
ccagttgcaagcagcaagatggttctaaacagttga
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