Microcaecilia unicolor: 115473304
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Entry
115473304 CDS
T09142
Symbol
TNRC6C
Name
(RefSeq) LOW QUALITY PROTEIN: trinucleotide repeat-containing gene 6C protein
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
muo
Microcaecilia unicolor
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
muo03019
]
115473304 (TNRC6C)
03036 Chromosome and associated proteins [BR:
muo03036
]
115473304 (TNRC6C)
Messenger RNA biogenesis [BR:
muo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115473304 (TNRC6C)
Chromosome and associated proteins [BR:
muo03036
]
Eukaryotic type
Gene silencing
piRNA pathway
115473304 (TNRC6C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
UBA
RRM_1
RRM_occluded
UBA_NBR1_C
THOC7
Motif
Other DBs
NCBI-GeneID:
115473304
NCBI-ProteinID:
XP_030064003
UniProt:
A0A6P7YG45
LinkDB
All DBs
Position
6:311778922..312032538
Genome browser
AA seq
1771 aa
AA seq
DB search
MHGDSSACNVTFPKMVGRHLSSDLSHSGLGDHYENSHWGQQATFRGDTNCSWDKVIIDRT
DKEAWPSITGTETEFASECTTDTDSASNCGSENSSMATGSAQGNFTGHTKKTNGNNGTNG
ALIQSTSNQSALGAGGANANGNTARVWGVAPGSNSGLAHCSSNGGDGKMDNMIGDGRSQN
CWGTSNSNAGINLNLNPNANPAAWPVLGHEGTVGGGNPSSVCSPVSAIGQNMGNQNGNPT
GTLGAWANLLPQESTELQTSASQNVSFSVQPQNLNTDGPNNTNPMNSSQNPINAMQANGL
PNWGMAVGMGAIIQPHLQSLPGANGSSVSQTGGSSCEVIGSSAWGMTPSNPTGNSSSGFS
QGNGDTVNSALSAKQNGSSSTVQKEGNAWDSGPPTSPSVMAWGRGGSGSGVGSMHSGAWG
HPCRNTGNGVNGEWSKLQNQHSNIDISGKGSTGWDSPSVASQNPATQQGNEQMNSWAKAA
ASSTTVGEGSNDGAGNQNEGSTGRGGIGMVDQGQVQLPRQDLDPRVLSNTGWGQTPVKQN
IAWNFEESSRSDRKNDNGTEAWGCAAAQSSNSGVKNDGSIVNSTNTSSVSGWVNSPPATV
PANTGWGDNNKAPNGPGGWGDSASSTAVNAAAAKSGHTWSGTANQEDKSPTWGEPHKPKS
QNWGDGQKSNPGWTSGGGDWADSSSIPGHMGDGKKNGSGWDFETRSGSGWNDNTRSGTSG
WGNGTNTKANPGTSWESLKPCPQQNWGNKSQDSNVNSWGGAASVKQTGSGWTGTGGPGPV
SGPAKQKDINSSSSSEPTGWEEPSPPSIRRKIEIDDGTSAWGDPSNYNKKTVNMWDRNNP
VSQSSTTANTTTTTTTTTNTAMVEPLPSHQSSAQQNRSPLLGSGWGDMPTVHTKTETSWG
EPPSPSAAIDNGTSAWGKPPNSGSGWGDSSAESAGTYGRASAPAAAPALCKPASKSMQEG
WGNSGDDMNLSTSQWEDEEGDVWNNAASQESNSSCSSWGNAPKKGLPKGMKTSSKQDEAW
IMNRLIKQLTDMGFPREPAEEALKSNNMNLDQAMSALLEKKVEMDKRGMGVTDYNGMVTK
PLGCRPPPISKESSMDRPTFLDKDGGLVEEPTSSPFLPSPSLKLPLSNSALPNQTLGGIA
TGLGMQNLNSSRQIPSGNLGMFGNSGAAQARTMQQPQQPPVQPLNSSQPSLRAQVPQFLS
PQVQAQLLQFAAKNIGLNPALLTSPINPQHMTMLNQLYQLQLAYQRLQIQQQMLQAQRNV
SGPMRQQEQQVARTINNMQQQIQQHQRQLAQALLMKQQPPPPHPSLHPSAGKSAMDSFSS
HPQAPSLSDLQTKEQQSSPNTFAPYPFVAGLNPNMNVNNMDITGGLSVKDTSQSQSRLPQ
WTHPNSMDNSSSAASPLDQNPSKHGAMSGGLSIGPPGKSSIDDXYSRYDLIQNSESPASP
PVAVPESWSRAKPDTDKISNGSSISWPPEFHPGVPWKGLQNIDPESDPDVTPGSVPTGPT
INTTIQDVNRYLLKSGGKLSDIKSTWSSSPISHTQASLSHELWKVPRNTTAPTRPPPGLT
NTKPSSTWGASPLGWTSSYSSGSAWSTDSSGRTSSWLVLRNLTPQIDGSTLRTLCLQHGP
LITFHLNLTQGNAVVRYSSKEEAAKAQKSLHMCVLGNTTILAEFAGEEEVNRFLAQGQPL
PPTSSWQSNTGSSQTRIGSTSSSHPLVRNDTGHWNAPCLGGKGSNDLLWGGVPQYSSSLW
GPPSADDGRVIRSPTPLNTLLPGDLLSGESL
NT seq
5316 nt
NT seq
+upstream
nt +downstream
nt
atgcacggagacagctctgcatgcaatgtaacgtttcctaaaatggttgggcgacacctt
tcctcagatctcagtcacagtggattgggagaccattatgaaaattcccactggggacag
caagctactttcagaggtgataccaactgcagctgggataaagtgataatagacaggact
gataaggaagcgtggccttccattacaggaactgagactgaatttgcctcagaatgtact
acagacactgactctgcctccaactgtggctcagagaatagtagcatggctacagggagt
gcccaaggcaacttcactggacatacaaagaaaactaatggcaataatggcaccaatgga
gcactcatccaaagcacttctaaccagagtgcccttggagcaggtggagcaaatgctaat
ggaaacacagccagggtgtggggtgtggccccaggctccaactctggtttagctcactgc
tccagtaatggtggtgatggaaagatggacaatatgattggagatggtagaagtcaaaac
tgctggggtacttccaactcaaatgctggcattaatcttaatcttaaccctaatgccaac
ccagctgcctggcctgtacttggacatgaaggaactgtggggggaggaaacccgtccagt
gtttgcagtccagtcagtgccataggtcagaatatggggaaccagaatgggaacccaact
ggcaccttaggtgcatgggcaaacttgctgccgcaagagagcacagaactacaaacgtcc
gcttctcagaatgtgtctttcagcgtacaacctcagaaccttaacactgatggaccaaat
aacactaaccccatgaactcttcacaaaaccctattaatgcaatgcaggcaaatggactg
ccaaactgggggatggctgttggtatgggggcaatcatccagccccatttgcaaagcctt
cctggtgctaatggatcatcggtctcacaaactggtggaagcagttgtgaagtaataggt
agttcagcgtggggcatgaccccatctaatcccacaggaaatagcagttctgggttcagt
caggggaatggagacactgtgaactcagcattaagtgctaaacaaaatggatccagtagt
actgtgcaaaaagaaggaaatgcatgggattcagggccacctacgagtcccagtgtaatg
gcatggggtaggggcgggagtggaagtggtgttggaagtatgcattctggagcttggggc
catccttgccgtaacactggtaatggtgtaaatggtgaatggagcaaactccaaaaccag
cattccaatattgacatcagtgggaaaggatcaacaggatgggatagccctagcgttgcc
agccagaatcctgccacgcagcagggcaatgaacaaatgaactcttgggccaaagctgca
gcatccagtactacagtgggtgaggggagtaatgatggtgctggaaatcaaaatgaagga
agcactggaagggggggaataggtatggtagaccaagggcaagtccagttgcctaggcaa
gatcttgatccaagggtcctgtccaatactgggtggggtcagactcctgttaagcaaaac
attgcttggaactttgaagaatcttcaaggtctgatcgaaagaatgacaatgggacagag
gcctggggatgtgcagctgctcagtcttcaaactcaggggtgaagaatgatgggtccatt
gtgaacagtacaaatacctcttcagtatcgggttgggtcaattcccctcctgcaactgtt
ccagcaaatacaggttggggagacaacaacaaagcgccaaatggcccagggggatggggg
gactcggcaagctctactgctgtcaatgctgctgctgccaaaagcggccacacttggagt
ggaaccgcaaatcaggaggacaaatcacctacctggggtgagcctcataagcctaaatct
cagaactggggagatgggcaaaaatcaaatccaggatggacttcaggaggtggagactgg
gcagattcatcatccattccaggtcacatgggtgatgggaagaagaatggttctggatgg
gactttgaaaccaggtcaggatctggatggaatgataatacaaggtctgggaccagtgga
tggggaaatggcacaaacaccaaggctaatcctggtacaagttgggaatctttaaaacct
tgtcctcagcaaaactggggtaacaaatcccaggatagcaatgtgaacagctggggagga
gctgcttctgttaaacagacaggatctggatggactggcactggtgggccagggccagta
tcagggccagccaaacaaaaggacatcaacagcagcagcagtagtgagcccacgggctgg
gaagagccttctccaccatccattcgccgcaagatagaaattgatgatggtacctcagct
tggggtgacccaagtaactacaacaaaaaaactgtaaacatgtgggatagaaacaaccct
gtaagtcaaagcagtaccacagccaacaccaccaccacaaccaccaccacaactaatact
gctatggttgaacctctgccatctcatcagtcaagtgcccagcagaaccggtccccactg
cttggttcaggctggggagacatgcctactgttcacacaaagactgaaacctcttgggga
gagcccccctccccctctgctgcaattgataatggcacttcagcttggggtaaaccacct
aatagtggttcagggtggggagatagctctgctgagtcagcagggacatatggaagggca
agtgctccagcagcagccccagcactgtgcaaaccagcttcaaaatctatgcaagaaggc
tggggcaatagtggggatgatatgaacctcagtacaagccagtgggaggatgaagaagga
gatgtatggaataatgctgcttcccaagaaagtaactcctcctgtagttcctgggggaat
gccccaaagaaaggacttccaaagggcatgaagacttctagcaagcaagatgaggcctgg
atcatgaatcgtctaataaaacagctcacagatatggggtttccaagggagcctgcagaa
gaggccttgaaaagtaacaatatgaatttggatcaggccatgagtgctctgctggaaaag
aaggtggaaatggacaagcgtggaatgggagtgactgactataatggaatggtcaccaaa
ccccttggctgccgcccgccaccaatctccaaagagtcttccatggaccgtcccacattc
cttgacaaggatggcggcctagtggaagagcccacttcttcaccgtttttgccttcacca
agcctgaaactccccctttcaaacagtgcactccctaatcagaccctgggtggcattgcc
acagggctgggcatgcaaaacttgaattcttctagacagataccgagtggcaatctgggt
atgtttggcaatagcggagcagcacaagccaggaccatgcaacagccgcagcaaccgcca
gtgcaacctcttaactcatcccagcctagtcttcgtgctcaagtgcctcagtttctatcc
cctcaggttcaagcacagcttttgcagtttgcagcaaaaaacattggtctcaatcctgca
ctattaacctcgccaattaatcctcagcatatgacgatgttgaaccagctctatcaactg
cagctggcataccaacgtttacaaatccagcagcagatgttacaggctcagcgtaatgtt
tctggacccatgagacaacaggagcagcaagttgcacgtacaatcaataacatgcagcag
cagatccagcagcatcaacgccagctggcccaggccttgcttatgaagcagcagcctccc
ccaccacatccttctctacacccttctgcaggcaaatcagccatggacagtttctcatcc
catccccaggctcccagcctatctgacctgcagaccaaagagcagcaatcttcacctaac
acctttgctccttacccttttgtcgctggactgaacccgaacatgaatgtaaacaacatg
gacattactggtggtttatcagtgaaggacacttctcagtcccaatctcgccttcctcag
tggacacaccccaactcaatggataattcatccagtgctgcctctccacttgaccagaac
cctagcaagcacggtgctatgtctggaggtttaagcattggtcccccaggcaagtcctcc
attgatgacntctacagccggtatgatctgatccaaaatagcgaatcaccagctagccct
cctgtagctgtacctgaaagctggtcacgtgccaaacctgatactgataaaatatctaat
ggctctagcatcagctggccaccagagtttcaccctggagtgccatggaaaggtctgcag
aatattgacccagaaagtgatcctgatgtcacacctgggagtgtcccaactggaccgacc
attaataccaccatccaggatgtaaatcgctatcttctcaagagtggaggtaaattgtca
gacatcaaatctacatggtcctccagcccaatctctcacactcaagcctcattgtctcac
gaactgtggaaggtacctagaaacactactgctccaacaagaccgcctccaggcttaact
aataccaagccatcatctacctggggtgccagtcctcttggctggaccagctcttactct
tccggttctgcttggagcactgacagctcaggaagaacaagtagctggttagttctccgt
aacctcacaccccagatcgatggctccacattgcgaacgctgtgtttgcagcatggccct
ctgattacattccacctgaacctaactcaagggaatgctgtggtccgatacagttccaag
gaggaagcagccaaggcccagaaatctctgcatatgtgcgttctgggaaatacgaccatc
cttgccgagtttgcaggtgaagaggaagttaaccgttttttagcacaaggccagccactg
ccacccacctccagttggcagtccaacactggaagcagccagactcgcattggctccaca
agcagctctcatccactggtgcggaatgacacaggccattggaatgccccatgcctaggt
ggcaaagggagcaacgatttgctttggggaggggtccctcagtattcaagcagcctttgg
ggcccacctagtgcagacgatggcagggttatcagaagccctacacctttaaacaccctt
cttccaggtgaccttctcagtggagagtctttgtaa
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integrated database retrieval system
