Microcaecilia unicolor: 115473459
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Entry
115473459 CDS
T09142
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
muo
Microcaecilia unicolor
Pathway
muo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115473459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
muo03041
]
115473459
03009 Ribosome biogenesis [BR:
muo03009
]
115473459
Enzymes [BR:
muo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115473459
Spliceosome [BR:
muo03041
]
Complex A
U1 snRNP components
U1 related factors
115473459
Complex B
115473459
Ribosome biogenesis [BR:
muo03009
]
Eukaryotic type
Pre-60S particles
Helicases
115473459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
115473459
NCBI-ProteinID:
XP_030064290
UniProt:
A0A6P7YMC8
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All DBs
Position
6:complement(328775321..328782510)
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AA seq
611 aa
AA seq
DB search
MPGYGNDRDRGRDRGFGGPRFGGSRGGPPPGKKFGNPGERLVKKIWNLNELPKFEKNFYQ
EHPNVTRLTPQEVEQYRRSKEITVRGHNCPKPVMNFYEANFPVSLMDVIKGQNFTEPTAI
QAQGWPVALSGLDMVGVAQTGSGKTLSYLLPGIVHINHQPFLERGDGPIVLVLAPTRELA
QQVQQVAGDYGRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLR
RCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYVHI
NIGALELSANHNILQIVDVCQDGEKDDKLLRLMEEIMSEKENKTIVFVETKRRCDDLTRR
MRRDGWPAMGIHGDKSQQERDWVLSEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSSKTGTAYTFFTPNNVKQVSDLISVLREANQAINPKLLQLIEDRGR
FRGRGMKDDRRDRYSTGKRFGGGLRDRENYDRGFGSKTQNGAYNTHNYSNGNAYGNYGTA
GMQSTYRSGNQTSYQNGYDASQQYGSMMNGMAQQQYTYPAAATTATAPPPPPAAATSTPM
MGYPMPTGYPQ
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgcctggatatggaaacgacagagaccgtggtagagaccgagggtttggtggtcctcgc
tttgggggtagtaggggaggacccccacctggaaagaagtttggaaaccctggtgagaga
cttgtgaagaaaatttggaacttgaatgagctgcccaaatttgagaaaaatttttaccag
gagcatcccaatgtaaccaggctcaccccgcaagaagtggagcaatacagaagaagcaag
gagataacagtaaggggtcataactgccctaaaccagttatgaatttctatgaagcaaat
tttccagttagcctcatggatgtaataaaaggccagaatttcactgagccaacagctatt
caggcacaaggttggccagttgctttaagcggattggatatggttggagtagcacaaact
ggatcaggaaaaacactttcttatttgttgcctggtatagtccatataaaccatcagcca
tttctggaacgaggtgatggaccaattgtattggtactggcaccaactcgagaattggct
caacaggttcagcaagtggcaggtgattatggtagggcatgccgtctgaagtcaacctgc
atttatggaggtgctccaaagggaccacaaattcgtgatctagaaagaggtgttgaaatc
tgtattgcaactcctggacgactgattgactttttagaagctggaaagaccaatcttaga
agatgtacataccttgtgctcgatgaagctgatagaatgcttgatatgggttttgaacct
caaataagaaaaattgtggaccagatcagacctgacagacagactttgatgtggagtgca
acatggcccaaagaagtgagacagcttgctgaagactttctaaaggattatgttcatatc
aacattggtgcattagagctgagtgcaaaccacaacattcttcagattgtggatgtatgt
caggacggcgagaaggatgataagctgcttcgattaatggaagaaattatgagtgaaaaa
gaaaacaaaaccattgtctttgtagaaaccaaacggcgatgtgacgatcttacacgacgg
atgagaagagatgggtggccagccatgggtattcatggagacaagagtcagcaggaacgg
gactgggttctgagcgaattcaaacatggtaaagctcctatcctgattgccacagatgtc
gcatcaagagggttagatgtggaagatgtgaaatttgtcatcaattatgactaccctaat
tcctcagaggactatatccatcgaattggaagaactgcccgtagtagcaaaacgggtaca
gcttataccttctttactcctaacaatgtaaaacaagtaagcgacctcatctctgtgctt
cgggaagctaaccaggcaatcaacccaaaactgctgcagctgattgaagatagaggtcga
ttcaggggtagaggcatgaaggatgaccgtcgtgacagatactctacaggcaagaggttt
ggtggcggtcttagagacagggaaaattatgacagaggctttggttcaaaaactcagaat
ggtgcttacaatactcacaactatagtaatggcaatgcctatggaaactacggtacagca
ggcatgcagtccacttacaggtctggaaatcaaacatcctatcagaatggttatgatgca
agccaacaatatggaagtatgatgaatggtatggcccaacagcagtatacatatcctgct
gctgctacaactgctactgctcctcctcctcctcctgctgctgctaccagtactccaatg
atgggctatccaatgccaacaggatatccccagtaa
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