Microcaecilia unicolor: 115473460
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Entry
115473460 CDS
T09142
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
muo
Microcaecilia unicolor
Pathway
muo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115473460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
muo03041
]
115473460
03009 Ribosome biogenesis [BR:
muo03009
]
115473460
Enzymes [BR:
muo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115473460
Spliceosome [BR:
muo03041
]
Complex A
U1 snRNP components
U1 related factors
115473460
Complex B
115473460
Ribosome biogenesis [BR:
muo03009
]
Eukaryotic type
Pre-60S particles
Helicases
115473460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
P68HR
ERCC3_RAD25_C
UTP25
Motif
Other DBs
NCBI-GeneID:
115473460
NCBI-ProteinID:
XP_030064291
UniProt:
A0A6P7YH67
LinkDB
All DBs
Position
6:complement(328722289..328761657)
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AA seq
625 aa
AA seq
DB search
MARISCIRLSDLFLNRQFKRAKICFCGRDRGFGGPRFVWSRGGPPPGKKFGNPGERLVKK
IWNLNELPKFEKNFYQEHPNVTRLTPQEVEQYRRSKEITVRGHNCPKPVMNFYEANFPVS
LMDVIKAQNFTELTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPGIVHINQPFLEQG
DGPIVLVLAPTRELARQVQQVAGDYGRACRLRSTCIYGGAAKGPQIRDLERGVEICFATP
GRLIDFLEAGTISLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE
VRQLAEDFLKDYVHINIGALELRANHNIFQIVDVCQDFEKDDKLLRLMEEIMSEKENKTI
VFVETKRRCDNLTRRMRRDGWPAMGIHGDKSQKERDRVLSEFKHGKAPILIATDVASRGL
DVEDVKFIINYDYPNSSEDYVHRIGRTARGSKTGTAYTFFTPNNVKQVSDLISVLREANQ
AINPKLLQLIEDRGQFRGRGMKDDSRDRYSTGKRFGGGLRDRENYDRGFGSKTQNGAYNT
HNYSNANAYGNNYGTAGMQSTYRSGNQTSYQNGYDASQQYGKMMNGMAQQQYTYPAAATT
ATAPPPAAATSTPMMGYPMPTGYPQ
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggctaggatctcttgcatcaggctgtctgatttgttccttaatagacagttcaagaga
gcaaagatttgtttctgtggtagagaccgaggatttggtggtcctcgctttgtgtggagt
aggggaggacccccacctggaaagaagtttggaaaccctggtgagagacttgtgaagaaa
atttggaacttgaatgagctacccaaatttgagaaaaatttttaccaggagcatcccaat
gtaaccaggctcaccccgcaagaagtggagcaatacagaagaagcaaggagataacagta
aggggtcataactgccctaaaccagttatgaatttctatgaagcaaattttccagttagc
ctcatggatgtaataaaggctcagaatttcactgagctaacagctattcaggcacaaggt
tggccagttgctttgagcggattggatatggttggagtagcacaaactggatcaggaaaa
acactttcttatttgttgcctggtatagtccatataaaccaaccatttctggaacaaggt
gatggaccaattgtattggtactggcaccaactcgagaattggctcgacaggttcagcaa
gtggcaggtgattatggtagggcatgccgtctgaggtcaacctgcatttatggaggtgct
gcaaagggaccgcaaattcgtgatctagaaagaggtgttgaaatctgttttgcaactcct
ggacgactaattgactttttagaagctggaacgatcagtcttagaagatgtacatacctt
gtgctcgatgaagctgatagaatgcttgatatgggttttgaaccccaaataagaaaaatt
gtggaccaaatcagacctgacagacagacattgatgtggagtgcaacatggcccaaagaa
gtgagacagcttgctgaagactttctaaaggattatgttcatatcaacattggtgcatta
gagctgagagcaaatcacaacatttttcagattgtggatgtatgtcaggacttcgagaag
gatgataagctgcttcgattaatggaagaaattatgagtgaaaaagaaaacaaaaccatt
gtctttgtagaaaccaaacggcgatgtgacaatcttacaagacggatgagaagagatggg
tggccagccatgggtattcatggggacaagagtcagaaggaacgggacagggttctgagt
gaattcaaacatggtaaagctcctatcctgattgccacagatgtcgcatcaagagggtta
gatgtggaagatgtgaaatttatcatcaattatgactaccctaattcctcagaggactat
gttcatcgaattggaagaactgcccgtggtagcaaaacgggtacagcttataccttcttt
actcctaacaatgtaaaacaagtaagcgacctcatctctgtgcttcgggaagcaaaccag
gcaatcaacccaaaactgctgcagctgattgaagacagaggtcaattcaggggtagaggc
atgaaggatgacagtcgtgacaggtactctacaggcaagaggtttggtggcggtcttaga
gacagggaaaattatgacagaggctttggttcaaaaactcagaatggtgcttacaatact
cacaactatagtaatgccaatgcctatggaaacaactacggtacagcaggcatgcagtcc
acttacaggtctggaaatcaaacatcctatcagaatggttatgatgcaagccaacaatat
ggaaagatgatgaatggtatggcccaacagcagtatacatatcctgctgctgctacaact
gctactgctcctcctcctgctgctgctaccagtactccaatgatgggctatccaatgcca
acaggatatccccagtaa
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