Microcaecilia unicolor: 115473755
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Entry
115473755 CDS
T09142
Symbol
VPS16
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
muo
Microcaecilia unicolor
Pathway
muo04140
Autophagy - animal
muo04148
Efferocytosis
muo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115473755 (VPS16)
04148 Efferocytosis
115473755 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115473755 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
muo04131
]
115473755 (VPS16)
Membrane trafficking [BR:
muo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
115473755 (VPS16)
Hops complex
115473755 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
115473755
NCBI-ProteinID:
XP_030064701
UniProt:
A0A6P7YIH4
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Position
7:140509106..141435309
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AA seq
835 aa
AA seq
DB search
MDCYTANWNPLGAVFYRKFDLYSMDWNLKEDLRDCLIAAGPYGGPVALLKNYSAKGMSSS
LRPVLEIYTASGLPLSSIPWKSGQVVQLGWTVTEDLLCIQEDGSVLIYDLFCGFKRHFSM
GNEVLQQHVVEARVFHTEYGTGVSILTKASRFTLTTNIDDLKLRRMPGIPGPPSCWAVLF
QDRATVILFAFGKDLYLLDHTSCSLLMPPGMSPLAGSYLDMSISFNHKLLALFTEPGYIW
MGSSSLKEKFGEYNSSIQLPPKQMVWCTRPRSKQHAIVLMWDRLLRLVGNSTESIQFVLD
EESYLVPELDGVRIFSRSTHEFLHEIPGATEEIFKIASMAPGALLLEAQKEYEKVSQKAD
EYLREIKDKGLLSEAVTQCIEAAGYEQEPEMQKSLLRAASFGKCFIDKFSPDGFVKMCRE
LRVLNAIRDYQIGIPLSYTQFHQLTIEVLLDRLVLRRLYSLAIKICDYLRLSEFQGVSRI
LAHWACYKVQQKDKSDEEVAKAINQKLRETPGISYSEIAARAHACGRMELAIKLLEYEPR
FGEQVPLLLKMKRSKLALSKAIESGDTDLVYTVVTYLKNELNRAEFFMTLQNQPVALSLY
RQFCKHQELETLKDLYNQDDDHQELGNFYMRSSYISEKRIEGRVSALQSAVDEYNKAKNE
FACKATEDQIKLLRMQHRLEDELDKSYLDISLHDTVSNLVMDGMFSKAEQLYKEFKIPDK
RYWWLKISALAEREDWEEMEKFSRSKKSPIGYLPFVEXCMKQDNRYEAKKYVARVTPEQR
VRSYILVGDLDQAAEAAIEHKNENEMILVQSKCTPTTDSVILEKINRAKTQILKK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggactgttacacagcaaactggaacccactcggggcggtgttttatcggaagtttgat
ttatacagcatggactggaacctgaaggaggatctcagggactgtcttattgctgctggc
ccttatgggggtcctgttgctctacttaagaattactctgcaaaaggaatgtcttccagt
ttaaggcctgtgctggaaatttatacggcatcagggcttcccctctccagcataccatgg
aagagtggtcaggtggtgcagctgggctggacagtaactgaggacctgctttgcattcaa
gaggatggatctgtgcttatctatgacttgttttgtggattcaagcgccatttcagcatg
ggcaatgaggttttgcagcaacatgtggtggaagctagggttttccatactgagtacggt
actggtgtttccatactaaccaaagcctctcggtttacccttaccacgaatattgatgat
cttaagctgcgccggatgccaggtataccaggtcctccatcctgctgggctgtcctattt
caagacagggcaaccgtgatcttgtttgcatttggtaaggatttatatctcttggaccac
acatcttgttccttgctgatgcctcctggaatgagtcctctggctgggtcatatctggat
atgtccatctcttttaatcataaactactagcattgtttactgaacctggatatatctgg
atgggatcatcatctttaaaggaaaaatttggtgaatacaactccagtatacagttgcct
ccaaagcaaatggtttggtgtacaagaccccggagtaagcagcatgctattgtactgatg
tgggacagactcctcaggctggttggaaattctacagaaagcattcaatttgttttggat
gaggaatcgtacttggtgcctgaactggatggagtgagaatcttctctcgttccacacat
gagtttcttcatgaaatcccaggggccactgaagagatctttaaaattgcatcaatggcg
cctggagctcttctactggaagcacagaaggaatatgagaaagtaagtcaaaaagctgat
gagtacctgcgagagataaaggacaaagggctgttgtctgaggcagtgacccagtgcata
gaagcagcaggctatgaacaagaacctgagatgcagaagtctttgctcagggcagcctcc
tttggaaaatgctttattgacaagttctctccagatggctttgtaaagatgtgccgtgag
ttgcgagttctcaatgccattcgagattatcaaattgggatcccattgagctacacccaa
ttccatcaactcaccattgaagttctgctggacagattagttttacgaagactttactct
ctcgctattaaaatctgtgactacctgcggttgtcggaatttcaaggagttagtcgcatc
ttggctcactgggcatgctacaaggtacagcagaaggacaagtctgatgaagaggtagca
aaagccatcaatcaaaaactgagagaaaccccgggtatatcgtactctgagattgctgcc
agggcacatgcctgtggaaggatggagcttgctataaagcttttagaatatgaacccagg
ttcggggagcaagtacctttgctgttaaagatgaagagaagcaaacttgccttaagcaaa
gcaattgagagtggagacactgatctggtatacactgttgtgacatacttgaagaatgaa
ctaaaccgtgccgagtttttcatgacattacagaatcaaccagtggccttgagcctctat
cgacagttttgtaaacatcaggaacttgaaactttaaaggatctttataatcaagatgat
gatcatcaggaacttggaaatttctacatgcgttctagttacatctcagaaaagagaatt
gagggaagagtctcagcactacagagtgctgttgatgagtacaacaaggctaagaatgaa
tttgcgtgcaaggcaactgaggatcagattaagctgctgcgaatgcaacacaggttagag
gatgaactggataagtcctacttggacatatccctgcatgacacagtttccaatctggtg
atggatggcatgttcagtaaagctgagcagctatacaaagaattcaaaattcctgacaaa
aggtactggtggctgaagatttctgctttggcagagagagaggactgggaggaaatggaa
aagttttccagaagtaaaaagtcacctattggctacctgccctttgttgaantgtgtatg
aaacaagataaccgctacgaggcaaagaaatatgtggcaagagtgactccagaacagagg
gtcagatcgtacatcctggtgggggatctggatcaagctgctgaggctgcaattgaacac
aagaatgagaatgagatgattctggttcagtctaaatgtactccgaccactgatagtgtc
attctggagaagatcaaccgagcaaaaactcagattttgaagaaatga
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