Microcaecilia unicolor: 115473797
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Entry
115473797 CDS
T09142
Symbol
THOC6
Name
(RefSeq) THO complex subunit 6 homolog isoform X1
KO
K13175
THO complex subunit 6
Organism
muo
Microcaecilia unicolor
Pathway
muo03013
Nucleocytoplasmic transport
muo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115473797 (THOC6)
09122 Translation
03013 Nucleocytoplasmic transport
115473797 (THOC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
muo03019
]
115473797 (THOC6)
03041 Spliceosome [BR:
muo03041
]
115473797 (THOC6)
Messenger RNA biogenesis [BR:
muo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
115473797 (THOC6)
Spliceosome [BR:
muo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
115473797 (THOC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_WDHD1_1st
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_WDR5
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WD40_Gbeta
ANAPC4_WD40
Beta-prop_WDR41
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_ACSF4
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
Beta-prop_IP5PC_F
Beta-prop_SPT8
WDR54
Beta-prop_NOL10_N
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
115473797
NCBI-ProteinID:
XP_030064768
UniProt:
A0A6P7YIE4
LinkDB
All DBs
Position
7:complement(122042187..122364885)
Genome browser
AA seq
330 aa
AA seq
DB search
MDEMDMQRSLELLHMTVFSQSFSPCGKYLAAGNNYGQIAIFSLSSALSSEAKEESKKPVV
VFTAHDSPVYSLVSTDRQLISAGDGEVKAWNWSEIVKKGCKEAWSRRPPSRISLEIPEIN
CLLLNPKDNSLLLAGGDAHIYVMDMETGGFTNKFHGHKEYVHCLALREQVHECLSGSEDG
TVRLWDSRTGGQVHAIEVYKYEECCRPQYGKWIGCLATDSDWMLCGGGPALTLWHLRSLT
PTTIFPIQECQHQVMFYQDLILSAGQNPTINHCQISGDIKAQIPCTSRTIYSMSINDQSQ
ENKVLTAAGNSSRVDVFTNFGYRAFSLMFV
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggatgagatggatatgcaacgttcattagagctccttcacatgactgtcttttcccag
agcttttccccctgtgggaagtacctcgctgctggaaacaactacgggcaaatcgccata
ttcagcttgtcatcggcactgagctctgaagccaaggaagagagtaagaagcctgttgtt
gtgttcacagctcatgatagtcctgtatacagcttggtctccacagacagacagctgata
agtgctggagatggagaagtgaaggcctggaactggagtgaaattgttaagaagggctgt
aaggaagcctggagccgcaggccaccatccagaattagtttggagattcctgaaatcaac
tgtctcctcttaaacccaaaggacaacagtcttctgttggcaggaggtgatgctcacatt
tatgtgatggacatggaaacaggagggttcacgaataagttccatggacacaaggagtac
gtgcactgtctggcccttcgagaacaggtccatgaatgcttgtcaggcagcgaggatgga
accgttcgactttgggattcacgaactggaggacaagttcatgcaattgaagtttacaaa
tatgaggaatgttgtaggccacaatatggaaagtggataggctgcctagcaacagactct
gattggatgttgtgtggcggaggtccagcactcaccctgtggcatctccgctccctgact
cctaccacaatcttccccatccaggagtgccagcaccaggtcatgttttaccaggatttg
atcctctctgcaggtcaaaacccaacaatcaaccactgtcagatctctggcgacattaaa
gcccagattccctgtacttcccgcaccatctactccatgagtatcaatgaccagtctcag
gaaaacaaggtgctgaccgctgctggtaacagctcccgagttgatgtatttacaaacttt
ggatatcgagccttctctctcatgtttgtatag
DBGET
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