Microcaecilia unicolor: 115474199
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Entry
115474199 CDS
T09142
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
muo
Microcaecilia unicolor
Pathway
muo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
115474199 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
muo04131
]
115474199 (VPS8)
Membrane trafficking [BR:
muo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
115474199 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
Clathrin
TPR_VPS8_2
zf-RING_Vps41
TPR_Vps41
WD40_CDC20-Fz
zf-RING_11
zf-RING_2
zf_RING_Vps8_fungal
zf-RING_UBOX
WDR55
Motif
Other DBs
NCBI-GeneID:
115474199
NCBI-ProteinID:
XP_030065421
UniProt:
A0A6P7YKV0
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All DBs
Position
7:175553434..176485614
Genome browser
AA seq
1534 aa
AA seq
DB search
MTNHSTQAQSCVSSLSLVIAVLFRSLPPRKLDYSTNRVFNCFERRNGVESRRFNEPLVIK
EIACNEPSRAEYLGERENRVYAPALFLLASLGVLVLAVPAVAKMMEEERRASEKETASCS
VMENFHDDLNKPLTRDTALAPKFSYLDLEKEIDSKNDLIDDKEFDIPQVDTPPTLESILN
ETDDEDESFIPEDPSLLNIETVDTHSCDTSSLASSDSGDRTHLKRRKKLHDAFSRHGSVM
RRSLLKGVSAQIVSAADKVDAGLPTAIAVSNLIAVGTSHGLALIFDPNQALRLCLGSTAV
GAQYGAISALSINSDCSRLLCGFAKGQITMWDLASGKLLRSITDAHPPGTAILHIKFTDD
PTLAICNDSGGSVFELTFKRVMGVRTCDSRCLFSGSKGEVCCIEPLHAKAELRDHPITQY
FLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVAQQSSVNPMLAFCRGD
VVHFLLVKRDESGAIHVSKQKQLHLHYDLINFTWVNSRTVVLLDSAEKLHVIDRQTQEEL
EAMEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSICSYGGQIFYLGTKSVHVM
LLRNWRERIDHLLKQECFTEALALAWSFHEGKAKAVVGLSGDQSKRRVVVADRMVEILFQ
YADRALKKCPDQGKIQVMEQHFQDMVPVIVDYCLLLQRTDLLFTQMYDKLSENSVAKDVF
LDCLEPYILSDKLVGLTAQVMKDLLIHFQDRNMMDSVEACIVHMDITSLDIQQVVLMCWE
NHLYDAMIYVYNSGMNDFISPMEKLFKVIASPLSAGKALTDEQVVMGNKLLVYISCCLAG
RAYPLGDIPEDLVPLVKNQVFEFLIRLHSPEASFEEEVYPYMRTLLHFDTREFLNVLALT
FEDFENDKQAVEYQQRMVDILLKVMVENSDFTPSQVGCLFTFLARQLAKPENTLFVNRVL
FDQVLEFLCSPDDDSRHSERQQVLLELLQAGGLVQFEENRLIRLAEKAEFYQICEFMYER
KHQYDKIIDCYLQDPVRKEDVFNYIHNILSIPGYSPEEKQSTWNKSMGKIEELVSLNPCK
AADMVATHFIEQIDAIIKKLQDTYLLFQFLKSLLEPRDGAQISQEPPLMNPAVSELYIDL
LCGFSPLHVTEALKALEHYRIEETIQIAQKHKLLEASAYLLEKKGDVHGAFLVMLEKLQS
KLVVLTQENEKPKEVPPLKNVEDTLSETIALCQRASHSLNQQQREALWFPLLEAMMSPQK
LFSPAASQQYSEPLKCLTMLVLNSMAAFIALPSILQRILQDPVYGKGKLGEIQGLILGML
ETFNYEQTLLETTTNLLNQDLHWSLSNLRACVTRGLNPKQDYCCICLQQYKRKQEAADEI
IVFSCGHLYHSLCLLSKECSVEMVGQTRWTCYKCNSRNKGVQGSESVSELRQGRTSSLVQ
MKLTSSHHLASEECGNKKQTADTVLDPQQIQAFDQLCRMYRGTSRLALLTELSRTQGGEK
HGLLNVSQSGPAANSVFQNENFKLHLAPPPLTED
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatcacagcacgcaagcgcagtcatgcgtttcaagcctctctctggttatcgcc
gttcttttccgttcgcttccaccaaggaagttggattattcaaccaatcgcgtcttcaat
tgttttgaaaggagaaatggggtggaatcaaggaggtttaatgaaccccttgtaatcaaa
gagattgcttgtaatgaaccttctcgggcggaatatctgggggaacgggagaatagagta
tatgcgcctgcgctcttcctgctggcgtcccttggagttctggtccttgcagtaccggca
gtagcgaaaatgatggaagaagagaggagggccagtgagaaggaaacagcaagctgttca
gtgatggagaattttcatgatgatctgaataaacctttgactcgggacacagctctggca
ccaaagttcagctacctagacctggaaaaagaaatagactccaaaaatgatcttatagat
gacaaagaatttgatatcccacaagttgatactcctccaactttggaaagcattttgaat
gagaccgatgatgaagatgagtcttttattccggaggatccttctctcttaaatatagaa
actgttgatacacactcttgtgatacatcatctttggcgagctcagacagtggggaccgt
acacatttgaaaagaaggaagaaactccatgacgctttctcacggcatggatcagtgatg
cgacgttcccttctaaagggtgtttctgcgcaaattgtgtctgcagcggacaaagtggat
gctggcttaccaactgcaattgctgtatcaaatttgatagcagtgggaacttcacatgga
ctggccttaatatttgatccaaaccaggccttgcggttgtgtctgggtagcactgcagtt
ggggctcagtatggtgccatttctgctcttagtatcaacagtgattgttcccgattactc
tgtggcttcgcaaaaggacagattaccatgtgggacttggccagtgggaaactcttaaga
tccataacagatgcccaccctccaggaacagcaattttgcacatcaagtttacagatgac
ccaactcttgccatttgcaatgacagtggtggctccgtgttcgagttgacatttaagagg
gtcatgggagtgagaacatgtgactctcggtgccttttcagtggttccaagggtgaagtt
tgctgcattgagcccttgcatgcaaaggcagagctaagagatcatcccatcactcagtac
tttttattggctatggcatctttaactaagattttggttattggattgaagccgtctctt
aaagtctggatgacttttccctatggtcgcatggatccttccagcgtcccgcttttggcc
tggcattttgtagctcagcagagttcagtgaatccgatgctggcattctgtcgaggggat
gttgtgcatttcctcttggtaaagagagatgaatcgggggcaatacatgttagcaagcaa
aagcaacttcacctgcattatgacctcataaactttacatgggtcaattctcggacagta
gtgctgctagatagtgctgagaagctgcatgttatagatcgccagactcaagaagagcta
gaggctatggagatttctgaagttcagctggtatataatagcagccactttaaatccttg
gctacaggaggcaatgtcagccaagcactggcattagttggagaaaaagcctgttaccag
tctatctgcagttatggtggtcagatcttctatttgggcacaaagtctgttcatgtgatg
ctgttgagaaactggagagagagaattgatcacctactgaaacaagaatgttttacagaa
gcactggctctagcatggtcttttcatgaaggcaaagcaaaggctgttgtagggttgtct
ggagatcaaagcaaaagaagagttgtggttgctgatcggatggtagaaatacttttccag
tatgcagaccgtgctttgaagaagtgtccagaccagggtaaaatccaagtgatggagcag
catttccaggacatggtgcctgtcatagttgattactgtctcttgctgcagcgcacggat
cttttgttcactcagatgtatgacaagctcagtgaaaattcagtggccaaggatgttttt
ctagactgtttggagccatatatattgagtgacaagttggtggggctcacggcacaggtg
atgaaggacctgcttatccacttccaggaccgaaacatgatggatagtgttgaggcttgc
attgtgcacatggacatcacaagcctggacatacaacaggtggttcttatgtgctgggaa
aaccatctttatgatgcaatgatttatgtctacaacagcggaatgaatgacttcatcagc
ccaatggagaaactattcaaggtcattgcctctccgcttagtgcaggaaaggctcttaca
gatgagcaggttgttatgggcaacaagctcctagtctacataagctgctgtctggcgggc
cgtgcttatccattaggtgacatccctgaagatcttgtccctttggttaaaaatcaggtt
tttgagtttctaatccggctgcattctccagaagcatcttttgaagaagaggtgtaccct
tatatgcgcaccctactgcactttgacacaagagagtttctgaatgtcctagcattgact
tttgaagactttgaaaatgacaaacaagctgtggaatatcaacagagaatggttgacatc
ttattgaaggtaatggtggagaattctgatttcactccatcacaagtaggatgtctcttc
accttccttgcccggcagcttgcaaaaccagagaacactctgtttgtgaatcgggtgctt
tttgaccaagtgcttgaatttctctgcagcccagatgatgactcacgccattcagaaaga
cagcaggttcttcttgaactgctccaagctggaggactagttcaatttgaagagaacagg
ctgattcgtctggcagaaaaggcagaattctatcaaatttgtgagtttatgtatgaacga
aaacatcagtatgacaaaataatcgattgctacttacaagacccagtgagaaaggaagac
gttttcaactacatacacaatatcttatctattcctgggtacagtcctgaggagaaacag
tccacatggaataaatccatgggaaagattgaggagttggtctctctaaacccctgtaaa
gctgctgacatggttgccacccatttcattgaacagattgatgcaatcatcaaaaagctt
caggatacatatttacttttccagtttctgaaaagcctattggagcccagggatggtgct
caaatcagtcaagaaccgcctctgatgaatccagctgtcagtgagttgtatattgacctg
ctatgtgggtttagtcccctccatgtgactgaggcactgaaagccttggagcactacaga
atagaggagaccattcagattgctcaaaaacacaagcttctggaagcgtctgcctatctc
ctggagaagaagggcgatgtccatggagcatttcttgtcatgcttgaaaaattacagagc
aagcttgtggtgcttacacaggaaaatgaaaagccaaaagaagtgcctccattaaagaat
gttgaagatactctctcggaaaccattgcactttgccaaagggcatcacacagtttaaac
cagcaacaacgagaggcactctggtttccattgttggaggctatgatgtcacctcaaaag
ctcttcagccctgcagcatctcagcaatactctgaacctctgaaatgcttgaccatgctc
gtgttgaacagtatggcagcttttattgcccttccatcaattttacagagaatcttgcaa
gatccagtgtatggcaaagggaaactgggagagatacaaggtcttatactgggaatgctg
gaaacatttaactatgaacaaactcttttggagaccacaaccaacctgcttaaccaggat
ctacactggtccctttccaatctaagggcctgtgtgactagaggcctgaatccaaaacag
gattactgctgtatctgcctgcagcagtacaagagaaagcaggaggcagctgatgaaatc
atcgtgtttagctgtggtcatctttatcattctctgtgcctgctaagtaaagaatgtagt
gtggaaatggtggggcaaacaagatggacctgctacaagtgcaactccagaaacaaagga
gttcaaggaagcgagtctgtttctgagctcaggcagggaagaacttcttccttggtgcag
atgaaattgacatcatctcaccatttggccagcgaagaatgtgggaataaaaagcaaaca
gctgatacagtgttggatcctcaacaaatccaggcatttgaccagctgtgtcgtatgtat
agaggaacatcaaggctagcacttttgacagaactgtctcgcactcagggtggtgagaag
catgggctcctaaatgtatctcagagcggtcctgcagctaacagcgtcttccagaatgaa
aacttcaagctgcatcttgcaccccctcctttaaccgaagattaa
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integrated database retrieval system
