Microcaecilia unicolor: 115474242
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Entry
115474242 CDS
T09142
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
muo
Microcaecilia unicolor
Pathway
muo03013
Nucleocytoplasmic transport
muo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115474242 (UPF3B)
03015 mRNA surveillance pathway
115474242 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
muo03019
]
115474242 (UPF3B)
Messenger RNA biogenesis [BR:
muo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
115474242 (UPF3B)
mRNA cycle factors
P-body specific factors
115474242 (UPF3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Fer4_11
Motif
Other DBs
NCBI-GeneID:
115474242
NCBI-ProteinID:
XP_030065487
UniProt:
A0A6P7YDC6
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All DBs
Position
7:28693984..28725401
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AA seq
462 aa
AA seq
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MKQDKENAKPKERRVELRGEDPEKPERVKEKKETLSKVVIRRLPPSLTREQLEEHLQPLP
EHDYFEFFSNDSSLFPHMFSRAYINFKNQDDIVLFRDRFDGYVFIDQKGQEYAAIVEFAP
FQKVAKKKSKKKDAKCGTIDEDPEYRKFLENYSADDEKLACTPETLLEEIEARNKELIAK
KTTPLLNFLKNRQRIREEKREERRRRELERKRQREEERRKWKDEERRKRKEAEKLKKAER
GPETEREKSKDEPKIKLLKKPEKEDERDLEKKFKSRKSEKENLKEEKITTGQSSTLKRSD
GDMKEEKIKKSEDDYGRDYREKDYERERERERRLREKEKPRRLDEDRHKQRERFERDKTF
RRREEEFRKERDFYKERPKREKFADFTINSDKTEKATKEDKKEEMIKRDRIRNKDRPAMQ
LYQPGVRSRSRIAHCEENTPKSEELGADRKEECETHEIKEEE
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaggacaaggagaacgcgaaacccaaggagagaagagtggagttgcggggcgag
gacccagaaaagccagagagggtgaaggagaagaaagaaactctgagtaaggtggtgata
cggcgcttgccccccagcctgaccagggaacagcttgaagagcatctccagcctttacct
gagcatgattactttgaatttttttccaatgattcaagcttatttcctcacatgttttcc
agagcatatatcaactttaagaatcaagatgacattgttttgttcagggatcgctttgat
ggatatgttttcattgatcagaaaggtcaggagtatgccgccatagtagaatttgcacca
ttccagaaagttgccaaaaagaaaagtaagaagaaggacgccaaatgtgggaccatcgac
gaagaccccgaatacagaaagtttttggagaattacagtgcagatgatgagaagttggcc
tgcactcctgaaactctgctggaagaaatagaggcacgaaacaaagaactaatagctaaa
aagacaacgccacttttgaacttcttgaagaacagacagagaataagagaggaaaaaaga
gaagagaggaggaggagggaactggaaagaaaacgacagcgggaagaggagaggaggaaa
tggaaagatgaagaaagaaggaaaaggaaagaagcagagaagctgaagaaagcagagaga
ggtccagagaccgagagagagaaatcaaaggatgaacctaagattaagctgctgaagaag
ccagaaaaagaagatgaaagggatttggaaaaaaaatttaaatcaagaaagtctgaaaag
gagaatctgaaagaggaaaagattaccactgggcaaagttcaactctgaaacgatcagat
ggagacatgaaagaagagaagataaagaaatctgaagacgactatggaagagattatcgg
gagaaagactacgagagagagcgggagcgggaaagacgactgcgagagaaggagaaaccg
agacgcctagatgaagatcgccataagcagagggagcgatttgagcgagacaagacgttc
cgaagaagagaggaggaattcagaaaggagagagacttctacaaggaaaggccaaagaga
gagaagtttgcggacttcacaataaacagcgataaaactgaaaaagccaccaaagaagac
aaaaaagaggaaatgattaaaagagatcgaataagaaacaaggaccgccctgcgatgcag
ctttaccagcctggggtccggagtcggagtaggatagcacactgtgaagagaatacccca
aagtcagaagagctaggtgcagacagaaaggaagaatgtgagacacacgagataaaagag
gaggagtga
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