Microcaecilia unicolor: 115474440
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Entry
115474440 CDS
T09142
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
muo
Microcaecilia unicolor
Pathway
muo03013
Nucleocytoplasmic transport
muo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115474440 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
115474440 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
muo03019
]
115474440 (THOC2)
03041 Spliceosome [BR:
muo03041
]
115474440 (THOC2)
Messenger RNA biogenesis [BR:
muo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
115474440 (THOC2)
Spliceosome [BR:
muo03041
]
Complex C
Other components
EJC/TREX
115474440 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
115474440 (THOC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
115474440
NCBI-ProteinID:
XP_030065759
UniProt:
A0A6P7YRG5
LinkDB
All DBs
Position
7:26024140..26296607
Genome browser
AA seq
1594 aa
AA seq
DB search
MAAAVLPADWIKNWEKSGKNEFLQLCRSLSESKSHDSVTFKDIQQALYELAYHVIRGNLK
QDQAANVLGDIIDLRDDMPSILADVFCILDIETSCLEEKSKRDHFTQLVISCLYLVSDTI
LKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQD
FSGSITSDLILENIKSLIGCFNLDPNRVLDIILEVYECRPDHDDFFVPLIESYMYMCEPQ
TLCHILGFKFRFYQEPNGETPSSLYRVAAILLQQNLIELEDLYVHLLPVDTAILEEHKRE
IMEAKQVVRKLTLVVLSSEKTEDKEKEKEKEEEKAEKLPDNQKLGLLEALLKIGDWQHAQ
SIMDHMPSFYATSHKSIAMALCKLINMTIEPLYRRVGVPKGAKGLPCPPLQNKRAPKPAE
CFEDLRKDVFNMLCSLGPHLSHDPILFAKVVRLGKAFMKEFQSDGSKQDEKEKMEILFSS
LLSITDQVLLPSVTLMGCNACMSEELWGMFKTFSYHFRYRLYGQWKNETYNSHPLLMKVK
AQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLK
YLTSLNYDVLAYCIIEALANPEKERMKHDDTTISNWLQSLASFCGAVFRKYPIELPGLLQ
YVANQLKAGKSFDLLILKEVVQKMAGIEITEEITMEQLEAMTGGEQLKAEGGYFGQIRNT
KKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQFGG
FLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKAEKGNKQ
QQHKVHKYITSCELVMAPVHDAVISLHPPKVWDDISPQFYATFWSLTMYDLAVPQNSYNR
EVSKLKIQMKAIDDNIEMPLNKKKKERERCTALQDKLQEEEKKQMEHVGRVLQRMKLEKD
SWLLAKSTKNETITKFLQLCIFPRCIFSTIDAIYCARFVELVHQQKTPNFSTLLCYDRVF
SDIIYTVASCTENEASRYGRFLCCMLETVTKWHSDKNVYEKECGNYPGFLTILRATGFDG
GNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLG
QALERRVQKICQEEKEKRPDLYALAMGYSGQLKSRKPYMVPENEFHHKDPPVRSVAPAVI
QNGPGSAGQPASITVNAAKTEECTAEETEKAKEKSQSAAKVVNKAASATPKMSTSNGNAA
SNSSKLVKEKDDKEKSGKEKEKEKKEKVPVAIPEAKMQGKEGKEKPKEERAVKDDKPREA
KEKTPKSDKEKEKVKKEDKASKEEKSKIVVTNIELKLAAEKEREREPSREREVSKDTKSK
ESIKGGDKVAVVGPLKSPVPRSEQQESEREQKRRKLDTHSSPSHSSTVKDNFSDLKDSSS
KHYPNHTAPTLSKSKEREVDKKDLDKSRERSREREKKEEKERKERKRDHSNNDREVSQEI
KRRKEENGTGGSSKHSKSESPSDSPRSNEKEKNKSKSSSKEKSDSLKPDKMEKSSSGSKK
ESRHDKEKSEKKEKRDSSGGKEEKKHHKSSDKHR
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcagtcctacctgctgattggataaagaactgggaaaaatctggaaaaaac
gaatttttgcaattatgtcgaagtctcagtgaaagtaaaagccatgacagtgtgactttt
aaagatatccaacaagccctctatgaacttgcatatcatgtcattaggggaaacttaaaa
caggatcaagctgctaatgttcttggtgatattatagatcttcgagatgacatgccctca
atattagcagatgtgttttgtatattagatattgaaaccagttgcttagaagaaaagagc
aagagagaccattttacacagctggtaatatcttgtttgtatctggtttcggataccatt
ttaaaggagcggctggatccggaaacattagaatcattaggtctcatcaagcagtcccaa
caattcaatcagaaatcggttaaaattaagactaaacttttttataaacagcagaagttc
aatttgttaagagaagagaatgaaggttatgcaaagctgattgcggaactgggacaagat
ttctctggaagcataactagtgatttaatcctggaaaatatcaagtctttaataggttgt
ttcaacttggatcctaatagagttttggatatcatcctagaagtgtatgaatgcaggcca
gatcatgatgacttctttgtccctttgatagaatcctacatgtatatgtgtgagcctcaa
acactgtgtcatattcttggattcaaattcagattttatcaggaacctaatggagagacc
ccttcctctttgtacagagtagctgcaattcttttacaacaaaatctcatagagcttgaa
gatctttatgtccaccttcttccagtggatactgccattcttgaggaacacaaacgagaa
attatggaggctaaacaagttgttagaaaattaactttggtggtattatcctctgaaaag
acagaagataaagagaaggaaaaagagaaggaagaggagaaagcagaaaagctaccagat
aaccagaaacttggattgttggaagcactgttgaagattggtgattggcaacatgcacaa
agcattatggatcatatgccctctttttatgctacatcacataaatctatagcaatggca
ctttgcaaacttattaatatgactattgaacctctgtatcgaagagtgggagttcctaaa
ggtgccaagggattgccttgtcctcctctgcagaataagagagcaccaaaacctgctgaa
tgttttgaagatttgaggaaagatgttttcaacatgctttgctctcttggtccccatctc
tcacatgaccccattttattcgctaaagtggtgcgtctagggaaagcctttatgaaagag
tttcagtctgatggaagcaagcaagatgaaaaagaaaaaatggagatcttatttagtagt
ctgctcagtattacagatcaggtgttgcttccttctgttactcttatgggctgcaatgca
tgcatgtcagaagagctctggggaatgttcaaaacattttcttaccatttcaggtatcgt
ctttatggacaatggaaaaatgaaacgtacaatagccatccgctgctaatgaaagttaaa
gctcagacaatagacagagccaaatatatcatgaagcgtctaaccaaggaaaatgtgaag
ccttctggaagacagattggaaagctaagtcatagcaatccaacaattttatttgattat
atcttatcacagatacaaaagtatgacaacttgataacacctgttgtggattccttgaaa
tacctcacttcattgaactatgatgttttggcttattgtatcattgaagctcttgctaat
ccagagaaagagagaatgaaacatgatgatacgaccatctccaactggttgcagagcctg
gctagcttctgtggtgcagtgtttcgaaaatatcctattgagcttcctggtcttcttcag
tatgtggcaaatcaacttaaagcaggaaaaagctttgatctgcttattttgaaggaagta
gtacaaaaaatggctggaatagaaattacagaggagataacgatggagcagcttgaggct
atgactggtggggagcaactgaaagctgagggtggatactttggacagatcagaaacact
aaaaaatcatctcagaggttaaaagatgcattattagaccacgaccttgcccttcccctc
tgtctactaatggctcagcagaggaatggggtgatctttcaggaaggcggagagaaacat
ttgaaactggtggggaaactgtatgatcagtgtcatgacaccctggtgcagtttggtggg
tttttggcatccaatctaagtacagaggattatattaagcgtgtaccttcaatagatgtt
ctttgtaatgagtttcacacaccccatgatgcagcgtttttcctatcaagacctatgtat
gcacaccacatttcatctaaatatgatgaactcaaaaaggctgaaaagggaaataagcaa
caacagcataaggtccacaagtatatcacatcatgtgagttggtaatggcccctgtccat
gacgctgtgatctcactgcatcctcctaaggtttgggatgacatcagtccacagttctat
gctaccttctggtccctgaccatgtacgaccttgctgttccacaaaacagctataacaga
gaagtcagtaagctcaaaatccaaatgaaagccattgatgacaatatagagatgccactg
aacaaaaagaagaaggaaagggagcgttgcactgcccttcaggacaaacttcaggaagag
gagaagaagcagatggagcatgtggggagagttctgcagagaatgaagctagaaaaagat
agctggcttctggcaaaatctaccaaaaatgagaccatcacgaaatttctacagctgtgt
atatttcctcgttgcattttttcaaccattgatgccatttactgtgctcggtttgtagag
ttagtccatcaacagaaaactcctaatttttccacacttctctgctatgacagggttttt
tctgatattatttacacggtggcaagctgtactgaaaatgaagctagtcgatatggcagg
tttctgtgctgtatgctggagacagtgacaaagtggcacagtgataaaaatgtgtatgaa
aaggaatgtggaaattacccagggttccttaccatattaagggcaactggatttgatggt
gggaacaaagctgatcaattagattatgaaaacttccgacatgtggttcacaagtggcat
tataagttaacaaaggcatctgtacactgccttgagacaggagaatatactcatatcaga
aatatcctgattgtgctgaccaaaattcttccatggtacccaaaggttctgaacctgggc
caggcattggaaagaagagttcaaaaaatttgtcaggaggagaaagagaagaggcctgat
ctatatgctctggcaatgggctattctggacagttgaaaagtagaaaaccttacatggtg
cctgaaaatgagttccaccacaaggatccacctgtgaggagtgtggcacctgctgtgatc
cagaatggaccaggtagtgctggtcagcctgcatccatcacagtgaatgcagccaaaact
gaagaatgcacagctgaagagactgaaaaagcaaaagagaaatctcagagtgctgcaaaa
gtagttaataaagctgccagtgctacaccaaagatgtccaccagtaatggaaacgctgct
tcaaatagtagcaagctcgttaaagaaaaagatgataaagaaaagagtggaaaggaaaaa
gagaaagaaaaaaaagaaaaggttcctgttgctattccagaggccaagatgcaagggaag
gagggaaaagagaagccaaaggaagaacgggcagttaaagatgacaaaccgagagaggcc
aaagaaaaaacaccaaaatctgacaaagaaaaggagaaagtgaagaaggaagacaaagca
tccaaagaagaaaaatccaagatagttgttaccaacattgaattaaaactggctgcagag
aaggagagagagagagagccttccagagagagagaggtttcaaaggatacgaaatccaag
gagagcattaagggaggagacaaggttgcagttgttgggcccttgaagtcacctgttccc
cggtcagagcaacaggagtctgagagggaacaaaaacgtcgcaaactagatacccactct
tctccatcacattcctcaacagtaaaggacaacttcagcgacctcaaggactcttcatca
aagcactaccctaaccatactgctccaacactgtccaagagcaaggagagagaagtggac
aagaaagatttggataaatcaagggaaaggtcacgagagagagagaagaaagaagaaaag
gaaaggaaggaaagaaaaagggatcattcaaacaatgaccgtgaggtgagccaagaaata
aaaagacgtaaagaagaaaatggaacaggtggctcttccaaacatagtaaaagtgaaagt
ccttctgattcccctcgttcaaatgagaaagagaaaaacaaatcaaaatcttctagcaaa
gaaaaaagtgattcactcaaacctgacaagatggagaaaagttcttctggaagcaagaag
gaatctaggcatgataaggaaaagtcagaaaagaaagaaaaacgtgacagttctggagga
aaggaagaaaagaaacaccataaatcttcagataagcacagataa
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