Microcaecilia unicolor: 115474705
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Entry
115474705 CDS
T09142
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
muo
Microcaecilia unicolor
Pathway
muo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115474705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
muo03019
]
115474705
Messenger RNA biogenesis [BR:
muo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
115474705
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
115474705
NCBI-ProteinID:
XP_030066188
UniProt:
A0A6P7YME1
LinkDB
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Position
7:13102033..13155074
Genome browser
AA seq
554 aa
AA seq
DB search
MAAGGGSAPRGGREAEEDDENWLYGDDNIGKREDGAISGHSEPLRPLQDITQENRIGVSE
DKHMSEQAPQSGDDDTDSDSDEDDVKVTIGNIKTGAPSYLGTPMNLNFKAGRGYGASVSA
KLQSKGIDLDAVGNINGLPVIEVDLDSFDEKPWRMPGADLSDYFNYGFNEDTWKAYCEKQ
KRLQLGLDASPPESVENMITVQQGGAGSTENEPENSLITPELKLDLSPSLVGGRMKAGPP
PNRKLGGTIDVIGGLAGTIRRVEGRRRDKHASEENPIQVLGDHGNIPQGTNQPNSQPQQK
PAQPPPPQQPPPPFVPPSGPPPLPLTRPPPPHFLHPPPPVTNVPPPLHPPGMPPPGPIPG
LFPPPLAPPPALLIPTLDSSSASYNNRQPPSFGYSSRDSAFVSYPPISSTRTPWVSAVDK
GTSNSGGSRWEYSRSRRERDRERTPSISEYSNDDERYHYYSQERSYDYERERERERERER
EYRRSRDHSREREERHRERRHREKEESSKHKASRRKQHENEDGEGHRRHKHKKNKRSRED
KEDVVSLGEQDGKE
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggcggcggctcagcaccgagaggcggccgagaggcggaggaggacgacgag
aattggctgtacggggatgacaacattggaaaaagagaagatggagcaatctcgggacac
tcagagccgctgcgccctttgcaagacatcactcaggagaataggattggcgtcagtgaa
gacaaacacatgtcagagcaggccccccagagtggcgatgacgacaccgacagtgacagc
gatgaggacgatgtgaaagtcaccattgggaacatcaaaaccggagcgccttcctatctg
ggaaccccgatgaatctgaacttcaaagcaggtagaggctacggcgcatccgtttcagcc
aagctacagtcgaaagggattgatttggatgctgtcgggaacataaatggcctgccagtg
attgaagtggacttggattcattcgatgagaagccgtggaggatgccaggtgccgattta
tcagattatttcaattatggttttaacgaggacacttggaaagcttactgtgagaaacag
aagcggcttcagctgggactggatgcctcaccccctgaaagcgtggagaatatgataacg
gttcagcagggaggagcaggaagtacagagaatgagccagagaacagtcttatcacccca
gaacttaaactggatttgtcgccgtctcttgtcggagggcggatgaaggcaggccctcct
cccaacaggaagctgggtggaacgatcgatgtgattggcggacttgcaggcactatcagg
cgagtggaaggaaggcggagggataagcatgcatccgaggagaatcccattcaggttctt
ggagatcatggaaatataccgcaaggaacaaatcagccaaactctcaacctcaacagaaa
ccagcacaaccacctcctccgcagcagccaccaccaccgttcgtccctccaagcggtcct
ccccctctgccgctcaccaggccgcctccgcctcacttcctgcaccctcctccgcccgtg
actaatgttcctccacctctgcacccaccaggtatgccgcctccaggacccatcccaggg
ttgtttcctccacctctggctcctccaccagcacttctgattcccacacttgatagctcg
tctgccagctacaacaacagacaacctccttcgttcggatacagctccagagattcggct
ttcgtaagctatcctccgatctccagcactcgcacgccctgggtgtcggcagtggataag
gggacgagcaactctggaggaagtcgctgggagtattctcgatccagacgcgagcgggac
agagagagaacaccatctatcagtgaatacagcaacgatgatgagcgataccattactac
agccaggagagaagttacgattatgagcgtgagcgagagcgcgagagagagagagagcga
gagtaccggcgaagcagagaccacagcagagagagggaggagcggcacagggaacgcagg
caccgagagaaggaggagagcagtaaacacaaggcatccaggcggaaacagcacgagaac
gaagatggcgaaggccacagacgccacaaacacaaaaagaacaagcggagtcgagaggac
aaagaggatgtagtttccttgggagagcaggacggcaaagagtaa
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