Microcaecilia unicolor: 115474744
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Entry
115474744 CDS
T09142
Symbol
COL6A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(VI) chain
KO
K06238
collagen type VI alpha
Organism
muo
Microcaecilia unicolor
Pathway
muo04510
Focal adhesion
muo04512
ECM-receptor interaction
muo04518
Integrin signaling
muo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115474744 (COL6A1)
04518 Integrin signaling
115474744 (COL6A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115474744 (COL6A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
115474744 (COL6A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
muo04147
]
115474744 (COL6A1)
00536 Glycosaminoglycan binding proteins [BR:
muo00536
]
115474744 (COL6A1)
Exosome [BR:
muo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115474744 (COL6A1)
Glycosaminoglycan binding proteins [BR:
muo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
115474744 (COL6A1)
Hyaluronan
Extracellular matrix or blood plasma proteins
115474744 (COL6A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
VWA_3
vWA-TerF-like
VWA_CoxE
Piwi
Motif
Other DBs
NCBI-GeneID:
115474744
NCBI-ProteinID:
XP_030066246
UniProt:
A0A6P7YNB7
LinkDB
All DBs
Position
7:128969837..129392270
Genome browser
AA seq
1042 aa
AA seq
DB search
MVIQTNWVLPLLQLCLFWNGVLTQQKEVTGTPGTSTNIIISPPAKTSAFQDCPVDLFFVL
DTSESVALRVKPFGNLVEQVKDFTKTFIDKLTSRYYRCDRNLVWNAGALHYSDEVILIKG
LTRMPAGQNDLKTKVQNIAYIGKGTHTDCAIKRGIEEVLIGGSHQRENKYLIVVTDGHPL
EGYKEPCGGLEDAANEAKHLGIKVFSVAISPNHLEPRLSVIASDPSYRRNFTATSSVGLS
QQDIEETIDTIIDMIKSDVEHACCSYECQPARGPPGPPGDPGYEGEIGKTGLPGDRGEPG
DPGRPGDIGPVGYQGMKGDKGTRGENGGRGPKGAKGEKGHRGTDGIDGQKGEVGFEGLPG
CKGSPGIDGEEGPFGPKGDPGSYGSKGQKGEPGANGGPGRSGNTGNPGEKGEPGARGEPG
EKGESGDEGDAGPDGPLGERGGAGERGPHGTSGARGPRGTRGEPGLPGDQGRDGPAGPSG
DPGDLGPSGPKGYRGEQGPPGPEGPKGPRGPQGLPGDLGVIGERGEDGFPGNGTEGFPGF
QGYPGARGDRGVNGTKGYLGPKGDEGEPGDPGDDNPTPGTSGAKGAKGYRGNEGPPVSNI
GPPGPPGPPGPDECDILDIIMRLCSCCECACGPIDVLFVVDSSESIGLANFQMAKDFIIK
VIDRLSKDEHVKFDAGESKVGVVQYSHGNTQETVAMGDPNIQSIGQLKEAVKNLGWIAGG
TWTGEALLFTKDNLLKRFTSNKRVALVLTDGRSDTARDPTPLSSLCEINTQVLSLGVGDI
FSLPPNPEQLDAIACGGTQYEPGLSLQKENYAELLEDSFLENVTSYICKDKKCPDYTCPI
TFTSPVDITFLMDSSTSVGSRNFEITKTFAKLMAERFLSASKPAAGDLRISVVQYSGKNQ
QKVEAQFLTNYTEIAKDINDMEFINDATDVTAALRTVTNLYRQSSQAGKKKKVLLFSDGN
SQGITESILEQVMQEAKKAGIEIYVLAVGNNAHESNLQVLATGKTTGYDAAYGERHLFRV
ADYPSLLRGVFYQTVSRKISLD
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggtgatccaaacaaactgggtgctgcctctgttgcagctttgcctgttctggaatggg
gtactgactcagcagaaggaagtaactgggacccctggtacttccacaaacatcattatt
tcaccccccgccaaaacatcagcattccaagactgccctgtggacctcttctttgtactg
gatacttcggaaagtgttgctctcagagtcaaaccctttgggaatttagttgaacaagta
aaggatttcactaagactttcattgataagttaacatccaggtactaccgctgtgatcgg
aatctggtatggaatgctggagctctccattatagcgatgaagtaattctgattaaggga
cttactcgaatgcctgctggacaaaatgatctaaagaccaaagtgcagaatatagcttac
attggcaaaggcacccacacagattgtgccattaagagagggattgaagaggtgctgatt
ggtggctcccatcagagagagaataaatatctgattgtggtgacagatgggcatccattg
gaaggatataaagagccatgtggaggattggaagatgccgccaatgaagcaaagcatctt
ggaataaaagtgttctcagttgccatttctcctaaccacttggaacctcggctaagtgtc
attgcatcagatccgagctatcgaaggaacttcacagcaactagttcagtcgggttatct
cagcaggacatagaagaaacaatcgataccatcattgatatgattaaatcagatgtggag
catgcatgctgctcctatgagtgccagcctgccaggggacctccaggaccaccaggtgat
ccaggttatgagggtgaaattggaaagacaggacttcctggagacagaggagaacctggt
gatccaggtcggccaggggacatcggacctgtgggttaccagggaatgaagggagacaag
ggaactcgaggtgagaatgggggacgaggaccaaaaggagccaagggtgaaaagggccac
cggggaactgatgggattgatgggcagaagggtgaagttggatttgaaggattaccgggt
tgtaagggatctccaggaatagatggagaggagggaccttttggaccaaaaggagatcct
ggttcttatgggtcaaagggacaaaagggagagccgggtgctaatggaggaccaggaaga
tctggcaatactggaaatcctggggaaaagggtgagccaggggcccgaggagagcctgga
gagaaaggagaatctggagatgagggagatgctggccctgatggacccctaggagaaagg
ggaggtgcaggagagaggggtccacatgggacgtctggagctcggggaccaagaggaact
aggggtgagccaggactaccaggcgaccaaggtcgggatggacctgctggaccctctgga
gacccaggtgatcttgggccttctggacctaagggataccgaggtgaacaaggcccccct
ggacctgagggccctaaaggacccagaggaccacaaggattaccaggggatcttggtgtg
ataggggaaaggggtgaagatggtttccctggaaatggcactgagggattcccaggtttt
caaggatatccaggtgccagaggtgaccgaggagtcaatggcactaaaggttaccttggc
cccaaaggagatgaaggtgaacctggtgatcctggagatgataatcccactcctggtacc
tcaggagcaaaaggagccaagggctatcgaggcaatgaaggtcctccagtgagtaacata
gggcccccaggaccaccagggccaccagggcctgatgagtgtgacattttagatatcatc
atgagattatgctcatgctgtgaatgtgcatgcggccccattgatgtactcttcgtagtg
gatagttcagaaagtattggccttgcaaacttccagatggcgaaagatttcattattaaa
gtaattgacagactgagcaaagatgaacatgttaagtttgatgctggagagtccaaggtg
ggagttgtccagtacagtcatggaaatacccaggaaacagtggctatgggtgaccccaac
attcagtccattgggcagctaaaagaggctgtgaagaatctgggctggattgctggtgga
acttggactggggaagctctactctttacaaaggacaatctcctcaagcgtttcacctca
aataagagagtggccctggttctcacagatggacggtcagacacagctagagaccctact
cctctctcttcactctgtgagatcaatactcaggtcctgtcccttggtgtgggtgacatc
tttagtttacctccaaatccagagcagctagatgccattgcctgtgggggcacacaatat
gaaccgggtctttctttgcagaaggaaaattatgcagaacttctggaagattccttccta
gagaatgtcacttcttatatctgcaaagataaaaaatgtccagattacacctgtccaatt
actttcacaagcccagtggacatcacttttttgatggatagctctactagtgttggaagc
cgaaactttgagattaccaaaacctttgctaagctcatggcagagcggttcctgagtgca
agtaagcctgcagcaggagatttgcgcatttccgttgttcaatacagtggcaaaaaccag
caaaaagtggaagcacaatttttaaccaactacacagaaattgccaaagatatcaatgat
atggagttcatcaatgatgctactgatgtgactgctgcccttagaactgttactaacctc
tatcgccagtcctcacaggctggaaaaaagaagaaggtattgctcttttctgatggtaac
tcacaaggaatcaccgagagcattcttgagcaggtcatgcaggaagcaaagaaagctgga
atagagatttatgtgcttgcagttggcaacaatgcccatgagtccaatctacaggttttg
gccactggaaaaaccacagggtatgatgctgcttatggggaacgtcatctctttcgggtg
gctgattatccctccctgctcaggggggttttctatcaaacagtatcaaggaagatttca
ctagactga
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