Microcaecilia unicolor: 115474763
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Entry
115474763 CDS
T09142
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB-like
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
muo
Microcaecilia unicolor
Pathway
muo03022
Basal transcription factors
muo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115474763
09124 Replication and repair
03420 Nucleotide excision repair
115474763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
muo03021
]
115474763
03400 DNA repair and recombination proteins [BR:
muo03400
]
115474763
Enzymes [BR:
muo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
115474763
Transcription machinery [BR:
muo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
115474763
DNA repair and recombination proteins [BR:
muo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
115474763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
AAA_34
Motif
Other DBs
NCBI-GeneID:
115474763
NCBI-ProteinID:
XP_030066275
UniProt:
A0A6P7YSN2
LinkDB
All DBs
Position
7:complement(297730211..297825390)
Genome browser
AA seq
830 aa
AA seq
DB search
MRLPVSGTAGGWLERSRPGRSPLRARVRRWVSEVAGRRRKETRGPAMGDLKDKFEEKKKS
KKRQYEEEEEEEEDTLGGKPQEAVPSAAGKQVDEAGTKVDEYGAKDYRLQMPMKEDHTSR
PLWVAPDGHIFLEAFSAVYRYAQDFLVAISEPVCRPVHIHEYKLTAYSLYAAVSVGLQTS
DIIEYLQKLSKTGVPEGIVHFIKLCTVSYGKVKLVLKHNRYFVESIHPEVIQQLLQDHVI
KDCRLRNAEGEETELITETFTSKSAIAKTSEVGFGPSTSQGPEAHGKGDVPSDLFEFYEQ
MDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRNDSVNPDINIDLKPTA
VLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLGNSAVSVEQW
KAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSWEAERVMEWLKSQE
WGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNFLIGPKLYEANWM
ELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFRACQFLIKFHERR
NDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNPKINTIFISKVGDTS
FDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMIAEEYNAFFYSLVSQDTQEMAYST
KRQRFLVDQGYSFKVITKLAGMEEEELAFSTKKDQQQLLQKVLAASDLDAEEEVVAGESG
LKSSTQVARRFGTMSSMSGADDTVYMEYQAPRSKSSTSKHIHPLFKRFRK
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgcgacttcctgtttccggtacagctggaggctggctggagaggagccgtcctggacgg
agcccgttgagagcaagagtaagacgttgggtgtcagaggtggcgggacgccggagaaag
gagactcggggcccggccatgggcgacctgaaagacaagtttgaggaaaagaagaaatct
aaaaagcgtcagtatgaagaggaggaggaggaggaggaggatactttagggggtaaaccc
caggaagctgtcccttctgctgctgggaagcaagtggatgaagctggcaccaaagtggat
gaatatggtgcaaaggattataggctacagatgcccatgaaggaggaccacacctcacgc
ccactttgggtggcgccagatggccacattttcctggaagccttttctgcagtttatagg
tacgcccaagactttctggtagccatatcagaacctgtgtgcagaccagtccatattcat
gagtacaaactaactgcttactcactctatgccgcggtcagcgttggtttgcagacaagt
gatatcattgagtacttacagaaactgagcaagactggggttccagagggcatcgttcac
tttattaagctgtgcacagtcagctatggaaaagtaaagctggtgctgaaacataacagg
tattttgtggaaagcattcatccagaagtaatccagcaacttcttcaggaccatgttatt
aaggactgccgactaagaaatgcagaaggagaagaaacggagcttatcacagagactttc
accagtaaatcggctattgcaaagacaagtgaggttggatttggtccctccacatcacaa
ggtcccgaggctcatggtaaaggcgatgtgccctcagacttgtttgagttttatgagcaa
atggacaaagatgaagaggaggaggaagaaacccagactgtatcatttgaagtcaaacag
gaaatgattgaagaacttcagaaacgatgtattcacctggaataccctttgctagcagaa
tacgatttcaggaatgactccgtcaatccagatattaatattgacctcaagccaactgct
gtccttcggccttaccaagaaaagagtcttaggaagatgttcggcaatggacgtgctagg
tctggtgttattgtgctcccatgcggtgctgggaaatctttagtgggtgttacagctgcc
tgtacagtacggaagcggtgcctggtactcggtaactctgctgtttcggtggagcagtgg
aaagcccagtttaaaatgtggtccaccatagatgacagtcagatctgtcgcttcacatcc
gatgctaaggacaaaccaattggctgttcggttgctattagcacgtactccatgctgggt
cacacgactaaaaggtcgtgggaagcagagagagttatggagtggctgaaaagtcaagag
tggggactcatgattctcgatgaggtgcataccatacctgccaagatgttccgccgtgta
cttaccatagttcaggcgcactgtaagctgggactgactgccaccctcgtccgagaagat
gacaaaattgtagatttgaacttcttgataggaccaaaattgtatgaggccaactggatg
gaactacagaacaatggttacattgctaaagtccagtgtgcagaggtctggtgcccaatg
tctcccgaattttatcgagaatatgtggctattaagacaaagaaacgaatactgctctac
acaatgaacccaaataaattcagagcatgccagtttctgattaaatttcatgaacggaga
aacgacaagatcattgtgtttgcagacaatgtctttgccctgaaggagtatgccatccgg
ctgaacaaaccctatatctatggccctacatcccaaggagaaaggatgcaaatattacag
aatttcaagcacaatccgaagatcaacactatctttatctcaaaggtgggtgacacatct
tttgacctaccagaagccaatgttctaattcagatttcttcccatggagggtctcggaga
caagaagctcagagactggggagggtgctgagagcaaagaaagggatgatagcagaggag
tacaatgcttttttctactccctcgtatctcaagacactcaagaaatggcatactcgacc
aaacgacagagatttctggttgatcaaggttatagcttcaaggtgattacaaagcttgca
ggaatggaagaggaagagctcgctttctcaactaaaaaagaccagcagcaacttctccag
aaagtgctagcagcatctgacctggatgctgaagaggaggtggtggcaggagaatctggt
ctaaagtcttcgactcaagtggctcgtcgttttggtaccatgagttccatgtctggggca
gatgacacagtttatatggagtaccaagcccctcgctccaagagctctacttcaaaacac
atccatccacttttcaaacgcttcaggaaatga
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