Microcaecilia unicolor: 115474808
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Entry
115474808 CDS
T09142
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
muo
Microcaecilia unicolor
Pathway
muo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115474808 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
muo03041
]
115474808 (PRPF40A)
Spliceosome [BR:
muo03041
]
Complex A
U1 snRNP components
U1 related factors
115474808 (PRPF40A)
Complex B
115474808 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
Motif
Other DBs
NCBI-GeneID:
115474808
NCBI-ProteinID:
XP_030066332
UniProt:
A0A6P7YFY1
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All DBs
Position
7:250504688..250707414
Genome browser
AA seq
971 aa
AA seq
DB search
MRLPLVGWSQSRPGTGEDRAIMSASDGANGPSQPAHFTNGPRMLRPAYMTHPVIPHYPPM
GMPPMGQRPPNMAPVSHGMMPQMMPPMSGPPMGQLPGIHPSVMSGMMMPHIPPGPMQPAV
PTGVSNMDAPVVGATAGAQAPHPAVSSQQSSTGNSSTNEEHHKQKSVWTEHKSPDGRTYF
YNIETKQSTWEKPDELKTPTEQLLSKCPWKEFKSDSGKSYYYNSQTKESRWAKPKELEDL
EAIIKAEESSKQEDSSPAPSVPAAAQETPSTIVAPAAPATPAAAPVPAPVAVTATATAAA
TTTTTTTAAPVTVTATAAPVATETDLAVADSAISAVENESTGTVTSEEQEQSAVLTAPEV
DAEGTNSAIEEPSKQELSVDSPKEEKENSKPVKKTYTWNTKEEAKQAFKELLKEKHVPSN
ASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESYQHFLE
NHEKMTSTTRYKKAEQMFGETEVWNAISERDRLEIYEDVLFFLAKKEKEQAKQLRKRNWE
ALKNILDNMANVTYCTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEE
EDEKQKGILRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTISSDIRFSNMLGQ
PGSTALDLFKFYVEDLKARYHDEKKIIKDILRDKGFIVEINTTFEDFVMVISSTKRATTL
DAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQAAPPIEPDSVWEEVRE
RFVKEPIFEDITLESERKRIFKDFIHLLEHECQHHHSKNKKHSKKSKKHHRKRSRSRSGS
DTEEEDDHSKKKRQRSESRSGSEHSSTEESERSYKKSKKHKKKNKKRRHKSDSPESDGER
EKDKKEKEREREKDKENEKERAKQRSDSRHKSPKKRTGKDSGNWDTSGSELSEGELESRR
RTLLEQLDDDQ
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgccgcttgttggttggtcccaaagtaggcctgggaccggagaagatcgggcc
atcatgtctgcgtcagatggtgcaaatggaccaagtcagccagcccatttcaccaatgga
ccacggatgctgcggccagcatatatgacgcacccagtcattcctcactatccacctatg
ggaatgcctcctatgggtcagagaccaccaaacatggcaccagtttcacatggaatgatg
ccccaaatgatgccacctatgagtggacctccaatgggacagttacctggaatccatcca
tctgtgatgtctggaatgatgatgcctcatatacctccaggtcccatgcaacctgcggta
ccgacaggcgtaagcaacatggatgcacctgtagtaggtgcaacagcaggtgctcaagcc
ccacatccagcagtttcaagccagcaatcaagtacaggcaacagttctacaaatgaagag
catcataagcaaaaatctgtatggactgagcataagtcacctgatggcaggacatatttt
tataacatagaaacaaagcagtctacatgggaaaagcctgatgagcttaaaacgcctact
gagcaattactgtccaaatgcccctggaaggagttcaagtctgactctggaaagtcttac
tactacaattcccagacaaaggaatcacgctgggcaaaacccaaagaattggaagatctt
gaagctattattaaagctgaagaaagcagtaaacaagaggattcttctccagcaccatct
gttcctgctgctgcacaagagactcctagtacaatcgttgctcctgctgctcctgctact
cctgctgctgctcctgttcctgctcctgttgctgttactgctactgctactgctgctgcc
actaccactactactaccactgctgctcctgttactgttactgccactgctgctcctgtt
gctactgaaactgaccttgcagttgctgacagtgcaatatctgctgtagagaatgaaagt
actggcactgttacaagtgaagaacaagagcagtctgcagttctgaccgcaccagaggta
gatgcagaaggcactaatagtgcaatagaagaaccttctaaacaggagctctcagtggat
tctcccaaagaggagaaagaaaacagcaaacccgttaaaaaaacgtatacatggaataca
aaagaagaagcaaagcaagcatttaaagaattgttgaaagaaaagcatgtaccatctaat
gcttcatgggaacaagctatgaaaatgatcattaatgatcccagatacagtgcattagca
aagttgagtgaaaaaaagcaagcctttaatgcttataaagttcagactgagaaagaagaa
aaagaagaagcaagatcaaagtacaaagaagcaaaagaatcttaccaacatttccttgaa
aaccatgagaagatgacgtccaccaccagatacaaaaaagcagagcagatgtttggagag
acggaggtgtggaatgccatatctgagcgtgatcgccttgaaatttatgaagatgttttg
ttctttttggccaaaaaagagaaggaacaagcaaaacagttgcgaaagaggaattgggag
gctttaaagaatatattggacaatatggctaatgtaacttactgtaccacttggtctgaa
gcacagcagtatctgatggacaacccaacttttgcagaggatgaggaacttcagaatatg
gataaagaggatgcacttatctgctttgaagaacatatcagagctttggaaaaagaagag
gaagatgaaaaacagaaaggtatactcagggaaaggcggcgacaacgtaaaaacagagag
tctttccagatatttttggatgagctacatgaacatggacagctgcattctatgtcatca
tggatggaattatatccaaccataagttcagacatcagatttagtaacatgcttggtcaa
ccagggtcaacagctcttgatcttttcaagttttatgttgaagatctgaaggcacgatat
catgatgaaaaaaagataattaaagatattttgagggacaaaggatttattgttgaaatt
aatactacttttgaagactttgttatggttatcagctctaccaaacgagcaacaacctta
gatgctggaaatatcaaactggctttcaacagtttgctagaaaaggcagaggctcgtgag
cgtgagagggaaaaggaagaagctcgcaaaatgaagaggaaagagtctgcatttaagagt
atgttaaaacaagcagcacctccaattgaaccagattctgtttgggaagaggttcgggag
aggtttgttaaggaaccaatatttgaagatattactctagaatctgaacggaagcgaata
tttaaagacttcatacatctacttgagcatgagtgtcagcatcatcattcaaagaataag
aagcattctaaaaagtctaaaaaacaccacaggaaacgttctcgttctcgctcgggctca
gatacagaggaggaggatgaccattctaaaaagaaaagacaacgatcagaatcacgatct
ggctctgaacactcctctactgaagagtctgagagaagctataagaagtccaaaaagcac
aagaaaaaaaacaaaaagaggaggcacaagtctgattctcctgaatcagatggtgaacga
gaaaaagacaaaaaggaaaaagagagagagagagaaaaggataaggaaaatgaaaaggaa
cgtgctaaacaaagatcagattctagacataaatctccaaaaaaacgaactggaaaagat
tctggcaattgggatacatcaggcagtgagctgagtgaaggagaattagaaagccgaaga
agaacccttttggagcaactggatgatgatcaataa
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