Microcaecilia unicolor: 115474933
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Entry
115474933 CDS
T09142
Symbol
COL3A1
Name
(RefSeq) collagen alpha-1(III) chain
KO
K19720
collagen type III alpha
Organism
muo
Microcaecilia unicolor
Pathway
muo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115474933 (COL3A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
muo00536
]
115474933 (COL3A1)
Glycosaminoglycan binding proteins [BR:
muo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
115474933 (COL3A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
TILa
Motif
Other DBs
NCBI-GeneID:
115474933
NCBI-ProteinID:
XP_030066503
UniProt:
A0A6P7YNA4
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All DBs
Position
7:complement(207807377..207983139)
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AA seq
1461 aa
AA seq
DB search
MTSFVQIIPLLLLAVFHPSVILAQQQESRQPTDCEQSGQVYSDRDVWKPEPCQICVCDAG
NILCDEILCDDTELNCDNPEIPFGECCPRCPTGPTGPRPPPNGNGNGDGDIKRGPKGDPG
VPGTPGIPGRNGDPGMPGSPGSPGVCLSCPTGGQGSFSPQFDVKSGVVDQMGLPGAPGPP
GPSGQPGHPGPPGSHGYQGATGEPGQAGPTGPPGPAGALGPIGPAGKDGESGRPGRPGER
GLPGTPGAKGPPGMAGFPGIKGHRGFDGKDGAKGDAGASGLKGDTGAPGANGSPGLMGPR
GQSGERGRPGSSGPAGSRGNDGAPGAAGPPGPSGSPGTAGFPGGPGHKGEPGSPGSKGSD
GAPGGRGEPGPQGHAGATGPPGPSGRDGGPGGKGEVGPAGVPGAPGLSGARGPPGPSGTN
GVPGQRGGNGEPGKDGGKGDVGPKGERGEAGSPGAAGPPGEEGKRGTNGEPGTNGVPGTQ
GERGTPGFRGPPGSNGVSGEKGPPGERGAPGTTGPSGPHGDAGRDGSPGLPGMRGLTGSP
GGPGADGKPGPQGPSGESGRPGNAGPPGSRGQPGVMGFPGPKGNEGQPGKNGERGNPGSG
GPQGLPGKNGDPGAPGPAGPAGPSGERGEPGASGPTGFQGLPGPAGNPGESGKPGEAGPK
GENGGPGSPGSKGEPGAPGERGAPGSPGTHGERGGPGPSGPEGGKGPAGPSGPPGSVGPP
GIQGMPGEPGTLGLPGIKGDKGESGSQGHDGSPGKDGGRGPAGPIGPPGPGGPTGDKGEP
GPSGGPGPTGSRGGPGERGEIGPPGPAGFPGAPGQNGEGGPKGEKGSAGERGEPGSPGAA
GPQGGPGSTGPAGAPGSKGERGSPGSPGGAGFPGARGLPGPPGNNGNAGPPGPSGGPGKD
GPPGPAGHAGAPGGPGGVGPKGEPGPQGQSGSPGQRGEAGAPGPAGISGPAGSRGVVGLP
GLSGRPGSSGLPGTKGEDGKPGTNGASGERGPAGPPGPSGISGSPGEAGRDGNPGSDGQP
GRDGFAGPKGDRGENGAPGAPGVPGAPGHVGSPGAVGPAGKSGDRGESGPAGSPGSSGPA
GTRGAPGPQGSRGDKGETGERGVNGMKGHRGFPGTAGAPGSVGPPGPPGALGNPGSAGPR
GPPGPSGPQGKDGHSGYAGPIGPPGPRGSRGETGSEGASGPAGPPGQPGPPGAPGPCCGG
PIAPEKGPFGQSPYFGDQPPEERINAVEIMSSLKSITSQIENIISPDGSRKNPARNCRDL
KLCHPELKSGYYWIDPNQGCKMDAIKVFCDMETGETCVNANPGSVPLKNWWTSSGNEKKH
VWFGESMNGGFQFSYGDSELPEDISEVQIAFLRILSSRASQNITYHCKNSIAYMDQENGN
VKKALKLMSSTDSEFKAEGNSKFTYAVLEDGCTKHTGEWGKTVFEIRTRKSMRLPIIDIA
PMDIGGPDQEFGVDIGPICFL
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atgacgagctttgtgcagataatcccactgctccttcttgcagtgtttcatccttcagtt
attttggcacaacaacaagaatcaagacagccaactgattgtgaacaatctggccaggta
tactctgaccgagatgtgtggaaaccagaaccttgccaaatctgcgtgtgcgacgctgga
aacattctctgtgatgaaatcctctgtgacgacacggaattaaactgtgataaccctgag
attccttttggagaatgttgtccaaggtgtcctacaggccctactggtccgaggcctcct
ccaaatggtaatggtaatggtgatggtgatatcaaacggggaccaaaaggtgatcctggt
gtacctggcacacctggaattcccggtcgaaatggtgaccctggcatgcctggttctcct
ggttctcctggagtatgcttgtcatgtccgactgggggacaagggagtttctctccacag
tttgatgtcaagtctggagtagtagatcaaatgggtcttcctggagcaccaggtcctcct
ggtccatctggtcaacctggtcatccaggtccacctggttctcatggataccaaggtgcc
actggcgaacctggacaagctggccccactggacctccaggtccagcaggagcattaggc
ccaattggaccagctggaaaagatggtgaatctggaagacctggacgacctggtgagcgt
ggattacctggtacaccgggtgctaaaggtccccctggtatggctggattccctggaatt
aaaggtcacagaggctttgatggaaaagatggtgctaagggtgacgcaggggcttctggc
ctgaagggtgacactggtgctcctggagcaaacggatcacctggactcatgggtccaaga
ggtcagtctggggaaagaggtcgccctggttcttccggtcctgctggttcccgtggtaat
gatggtgctcctggggcagctggcccacctggtccctctggctctcccggtactgcaggt
ttccctggtggcccaggccataagggtgaacctggttctcctggttccaaaggctctgat
ggagctccaggtggtagaggagaacctggtcctcaaggccatgctggtgctactggccct
cctggtccctctggcagagatggaggtccaggtggcaagggagaagttggtcctgctggt
gtgcctggtgctcctggtttaagtggggcccgtggccctcctggaccttctggtactaat
ggtgttcctggacaaagaggtggaaatggtgaacctggcaaggatggtggaaaaggagat
gtaggaccaaagggggagcgtggtgaagcaggttctcctggagcagctggtcctcctggt
gaagaaggtaaaagaggaactaacggtgaaccaggaacaaacggtgtgcctggaactcag
ggtgaaaggggtacgcctggtttccgtggtcctccaggtagtaatggtgtttccggtgaa
aagggtcctcctggagaacgtggtgccccaggaactacaggcccaagtggtcctcacggt
gatgctggacgtgatggcagccctggtcttcctggaatgagaggtttgacgggaagccct
ggaggcccaggagctgatgggaaaccaggacctcagggaccttctggagagtcaggacgg
cctggtaatgctggtccacctggttctagaggtcaaccaggtgtaatgggtttccctggt
cctaagggtaatgagggtcaacctggtaagaatggagaaagaggcaatcccggatctggt
ggcccacaagggctacctggaaagaatggcgatcctggtgctccaggtcctgctggtcct
gctggaccttctggtgaaagaggagaacctggagcaagcggtccaacaggcttccagggc
ttacctgggcccgctgggaatcctggagaaagtggcaaacccggtgaagctggtcctaaa
ggtgaaaatggaggccctggaagcccaggcagtaaaggtgaacccggtgcaccaggtgaa
cgtggagcaccaggttccccaggtacccatggagaaagaggtggtcccggtccgagtggt
ccagagggtggaaagggtcctgccggtccttctggccctcctggttcagtgggccctcca
ggtatacaaggaatgccaggtgagccaggaaccctgggacttcctggcataaaaggcgac
aagggagaatctggaagtcaaggacacgatggctcgcctggcaaagatggaggcagaggt
cctgcaggtcccatcggtccacctggtcctggaggcccaactggggataagggtgaacca
ggtccatcaggaggcccaggtccgacaggatcacgtggtggcccgggtgaacgaggtgag
ataggtcctcctggccctgctggcttccctggagcccctggacagaacggagaaggtggt
cctaaaggagaaaaaggttccgcaggtgaacgaggtgaacccggatctccaggagctgct
ggtcctcaaggtggccctggatcaacaggtccagctggtgcgccaggatcaaaaggtgaa
cgtggtagcccaggatctccaggaggagctggattccctggtgctcgtggcttgcctggt
ccacctgggaataatggtaatgcaggtccacctggtccttcaggaggtcctggcaaagat
ggtccccctggcccagctggccatgctggtgcaccaggcggccctggaggtgttggtcca
aagggtgaaccaggtccacaaggtcaaagcggttcaccaggtcaacgcggagaagcgggt
gctccaggtcctgctggcatttcaggcccagctggttcacgtggtgttgtaggacttcca
ggtttatctggaaggccaggttctagtggacttcctggtacaaagggtgaggatggcaag
cctggtaccaacggtgctagtggagaacgtggtcctgctggtccaccaggtccttctggt
ataagtggttcacctggagaagctggcagagatggaaaccctggctctgatggtcaacct
ggtcgtgatggattcgctggtcctaagggtgatcgtggtgagaatggtgctcctggtgct
cctggtgttccaggagctccaggccacgttggatccccaggtgctgttggcccagctgga
aaatcaggagacagaggagaaagcggtcctgctggttctcctggttcttcgggtcctgcc
ggtactcgtggtgctcctggtcctcagggttctcgtggtgacaaaggtgaaactggtgaa
cgtggtgtaaatggaatgaaaggtcatcgtggtttccctggtactgcaggtgcaccaggt
tctgttggtccaccaggtccaccaggagcacttggaaatccagggtctgctggtcccaga
ggtcctcctggaccatctggccctcaaggaaaagatggtcacagtggttatgctggccca
atcggtccaccaggtcctcgtggtagtagaggtgaaacaggttctgagggagcatctggt
ccagctggtcctccagggcaacctggccctcctggcgctcctggtccttgctgtggtgga
cctattgctcctgagaagggaccatttggacaatcaccgtattttggagaccaaccacct
gaggaaagaatcaatgctgttgagattatgtcttcattgaaatcaattacaagtcaaata
gaaaacatcattagccctgatgggtcacgaaagaacccagctcgtaactgccgtgacttg
aaattatgtcatccagagttaaagagtggttattactggattgatcctaatcaaggctgc
aagatggatgctataaaagtattctgtgacatggaaactggggagacgtgtgtaaatgcc
aatcctggcagcgttccattgaagaactggtggaccagcagtggaaatgagaagaaacat
gtttggtttggagagtccatgaatggtggcttccagttcagttatggtgattcagagctt
ccagaagatatttcagaagttcagattgcattcctcagaatcctctccagtcgggcctct
caaaacatcacgtaccactgcaagaacagcatcgcatacatggatcaggagaatggaaat
gtgaagaaagctctgaaactaatgagttcaactgacagtgaatttaaggcagaaggcaac
agtaaattcacatatgctgttttggaagatggctgcacgaaacacactggtgaatggggt
aaaacagtctttgaaatcagaacacgcaagtcaatgagattgcccattatagatattgca
cctatggatatcggtggtcctgatcaagaatttggagtggacattggccctatttgcttc
ttataa
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