Microcaecilia unicolor: 115475333
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Entry
115475333 CDS
T09142
Symbol
CNOT6
Name
(RefSeq) CCR4-NOT transcription complex subunit 6 isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
muo
Microcaecilia unicolor
Pathway
muo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115475333 (CNOT6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
muo03019
]
115475333 (CNOT6)
Enzymes [BR:
muo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
115475333 (CNOT6)
Messenger RNA biogenesis [BR:
muo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115475333 (CNOT6)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
115475333 (CNOT6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_4
LRR_8
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
115475333
NCBI-ProteinID:
XP_030066818
UniProt:
A0A6P7YP87
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All DBs
Position
8:complement(164890998..165010441)
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AA seq
579 aa
AA seq
DB search
MLYKKFSRLFGTELELRFRKTGMPKEKYDPPDPRRMYTIMSSEEAANGKKSQWAELEISG
KVRSLSSSLWSLTHLTALHVSDNFLSRIPPDIAKLHNLVYLDLSSNKIRSLPAELGNMVS
LRELHLNNNLLRVIPFELGKLFQLQTLGLKGNPLAHDILELYQEPDGTRRLLNYLLDNLA
GTAKRISSEQPPPRSWIMLQEPDRTRPIALFSVMCYNVLCDKYATRQLYGYCPSWALNWE
YRKKAIMQEILSCNADIVSLQEVETEQYYSFFLAELKERGYDGFFSPKSRARTMSEQERK
HVDGCAIFFKTEKFTLVQKHTVEFNQLAMANSEGSEAMLNRVMTKDNIGVAVLLEVRKEL
IEISSEKPYHGTEKQLILVANAHMHWDPEYSDVKLVQTMMFLSEVKNIIDKASRLFKPGV
SGEYGAIPLVLCADLNSLPDSGVVEYLSTGGVETNHKDFKELRYNESLTNFSCGGKNGPT
NGRITHGFNLKSAYENGLMPYTNYTFDFKGIIDYIFYSKPQLNVLATLGPLDHHWLVENN
VSGCPHPLIPSDHFSLFSQLELVLPFLPLVNGIHLPSRR
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgctttacaagaagttctcacgtttgtttgggaccgagcttgagcttcgcttcagaaaa
acaggaatgcctaaagaaaagtatgatccccctgatccacggagaatgtatacaattatg
tcctctgaagaagcagctaatgggaaaaaatcacagtgggctgagcttgaaataagtggg
aaagttagaagtttaagttcatctctatggtcattgacccatttgacagcattgcatgtt
agtgacaatttcttatctcgcattcctccggacattgccaagcttcacaatttagtctat
ttggacctgtcttctaataaaattcgcagtttaccagcagagcttgggaacatggtatca
ctcagggaactccatttaaataacaacctattacgagttattccttttgaactgggaaag
ctgttccagctacaaacattaggtctaaaaggaaatccccttgcacatgatatattggaa
ctgtatcaggagccagatggaactcgaaggctactgaattatttgcttgataatttagca
ggtactgcaaaaagaatttcatctgaacagccacctccaagatcttggattatgttacaa
gagcctgaccggacaaggccaatagccttattttctgtcatgtgttacaacgtgctttgt
gataagtatgccactcgtcagttatacggctactgtccgtcctgggctttgaactgggag
tatagaaaaaaagccatcatgcaagaaatcttgagctgcaatgccgacattgtaagcctt
caggaagttgaaaccgaacaatactacagcttttttctggcagaactgaaagaacgtgga
tatgatggattcttcagtccaaagtctagagctcggacaatgtcggaacaggaaagaaag
catgttgatggctgtgcaatattcttcaagacagaaaagttcacattggtgcagaaacac
actgtcgaattcaaccagttagctatggcgaattctgaagggtctgaagctatgttgaac
agagtaatgacgaaggataacattggagttgcagtgttgctagaggttcggaaggaattg
atagaaatatcatctgagaagccatatcatgggacagagaagcaacttatacttgtggct
aatgcacatatgcactgggatcctgagtattctgatgtgaaactggtccagactatgatg
ttcctgtctgaagtgaaaaacatcattgataaagcctcacgtttgttcaagcctggagtg
tcaggagaatatggagccattccacttgtactgtgtgctgatctcaactctctgccagat
tcaggtgttgttgagtacctgagtactggtggagttgaaacaaaccacaaagattttaaa
gaactacggtataacgaaagtcttactaacttcagctgtggtggaaaaaatggacccacc
aatggaaggattactcatggtttcaacctaaagagtgcctatgagaatggcctaatgcct
tacacaaactacacctttgattttaagggcataatagactacatcttctattctaaaccc
cagttgaatgtattagctactcttggaccattggatcatcactggctagtggaaaacaac
gtaagcggctgtccacatccactcattccttcggaccacttctctctcttttcacaactg
gaacttgttttgcctttcttgcctcttgtgaatggcatccatctaccgagcaggaggtag
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